RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.82■□□□□ 0.28
RAPGEF3-205ENST00000449771 DDX54Q8TDD1 881 aaKnown RBP16.82■□□□□ 0.28
RAPGEF3-205ENST00000449771 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
RAPGEF3-205ENST00000449771 SYNJ2O15056 1496 aa16.81■□□□□ 0.28
RAPGEF3-205ENST00000449771 RRP12Q5JTH9 1297 aaKnown RBP16.81■□□□□ 0.28
RAPGEF3-205ENST00000449771 GNL3LQ9NVN8 582 aaKnown RBP16.81■□□□□ 0.28
RAPGEF3-205ENST00000449771 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
RAPGEF3-205ENST00000449771 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
RAPGEF3-205ENST00000449771 CCDC158Q5M9N0 1113 aa16.8■□□□□ 0.28
RAPGEF3-205ENST00000449771 FAM43AQ8N2R8 423 aa16.8■□□□□ 0.28
RAPGEF3-205ENST00000449771 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.8■□□□□ 0.28
RAPGEF3-205ENST00000449771 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
RAPGEF3-205ENST00000449771 ZFYVE27Q5T4F4 411 aa16.79■□□□□ 0.28
RAPGEF3-205ENST00000449771 MAP7D2Q96T17 732 aa16.79■□□□□ 0.28
RAPGEF3-205ENST00000449771 CDK19Q9BWU1 502 aa16.79■□□□□ 0.28
RAPGEF3-205ENST00000449771 AAMPQ13685 434 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 WWC2Q6AWC2 1192 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 TCP11L2Q8N4U5 519 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 BRPF3Q9ULD4 1205 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 GRIN2BQ13224 1484 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 CDK5RAP3Q96JB5 506 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 OFD1O75665 1012 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 PIP4K2BP78356 416 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
RAPGEF3-205ENST00000449771 ATP2B2Q01814 1243 aa16.77■□□□□ 0.28
RAPGEF3-205ENST00000449771 HIP1O00291 1037 aa16.77■□□□□ 0.28
RAPGEF3-205ENST00000449771 LRRC9Q6ZRR7 1453 aa16.77■□□□□ 0.27
RAPGEF3-205ENST00000449771 NAT10Q9H0A0 1025 aaKnown RBP16.76■□□□□ 0.27
RAPGEF3-205ENST00000449771 PDILTQ8N807 584 aa16.76■□□□□ 0.27
RAPGEF3-205ENST00000449771 ATP2B1P20020 1258 aa16.76■□□□□ 0.27
RAPGEF3-205ENST00000449771 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
RAPGEF3-205ENST00000449771 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
RAPGEF3-205ENST00000449771 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.75■□□□□ 0.27
RAPGEF3-205ENST00000449771 HSP90AB2PQ58FF8 381 aa16.75■□□□□ 0.27
RAPGEF3-205ENST00000449771 GNAI2P04899 355 aa16.75■□□□□ 0.27
RAPGEF3-205ENST00000449771 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
RAPGEF3-205ENST00000449771 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
RAPGEF3-205ENST00000449771 CASKIN1Q8WXD9 1431 aa16.75■□□□□ 0.27
RAPGEF3-205ENST00000449771 MTERF4Q7Z6M4 381 aaKnown RBP16.75■□□□□ 0.27
RAPGEF3-205ENST00000449771 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 SULT6B1Q6IMI4 303 aa16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 SDF4Q9BRK5 362 aa16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 RUFY1Q96T51 708 aa16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 RBM5P52756 815 aaKnown RBP eCLIP16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 MYL6BP14649 208 aa16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 CABP1Q9NZU7 370 aa16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
RAPGEF3-205ENST00000449771 BRD4O60885 1362 aaPredicted RBP16.73■□□□□ 0.27
RAPGEF3-205ENST00000449771 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
RAPGEF3-205ENST00000449771 ANKLE2Q86XL3 938 aa16.73■□□□□ 0.27
RAPGEF3-205ENST00000449771 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
RAPGEF3-205ENST00000449771 IFT57Q9NWB7 429 aa16.73■□□□□ 0.27
RAPGEF3-205ENST00000449771 KRT18P05783 430 aaKnown RBP16.73■□□□□ 0.27
RAPGEF3-205ENST00000449771 SIL1Q9H173 461 aa16.73■□□□□ 0.27
RAPGEF3-205ENST00000449771 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
RAPGEF3-205ENST00000449771 TXLNAP40222 546 aa16.72■□□□□ 0.27
RAPGEF3-205ENST00000449771 SCAPERQ9BY12 1400 aa16.71■□□□□ 0.27
RAPGEF3-205ENST00000449771 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
RAPGEF3-205ENST00000449771 AK7Q96M32 723 aa16.71■□□□□ 0.26
RAPGEF3-205ENST00000449771 MNS1Q8NEH6 495 aa16.7■□□□□ 0.26
RAPGEF3-205ENST00000449771 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
RAPGEF3-205ENST00000449771 RRP9O43818 475 aaKnown RBP16.7■□□□□ 0.26
RAPGEF3-205ENST00000449771 KIF21BO75037 1637 aa16.7■□□□□ 0.26
RAPGEF3-205ENST00000449771 CDR1P51861 262 aa16.7■□□□□ 0.26
RAPGEF3-205ENST00000449771 PRDM11Q9NQV5 511 aa16.7■□□□□ 0.26
RAPGEF3-205ENST00000449771 NACAP1Q9BZK3 213 aa16.7■□□□□ 0.26
RAPGEF3-205ENST00000449771 MAGEC2Q9UBF1 373 aaPredicted RBP16.7■□□□□ 0.26
RAPGEF3-205ENST00000449771 CCDC173Q0VFZ6 552 aa16.69■□□□□ 0.26
RAPGEF3-205ENST00000449771 CAGE1Q8TC20 777 aa16.69■□□□□ 0.26
RAPGEF3-205ENST00000449771 TEX35Q5T0J7 233 aa16.69■□□□□ 0.26
RAPGEF3-205ENST00000449771 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
RAPGEF3-205ENST00000449771 CCDC57Q2TAC2 916 aa16.69■□□□□ 0.26
RAPGEF3-205ENST00000449771 SLC12A5Q9H2X9 1139 aa16.69■□□□□ 0.26
RAPGEF3-205ENST00000449771 CCT4P50991 539 aaKnown RBP16.68■□□□□ 0.26
RAPGEF3-205ENST00000449771 TTLL5Q6EMB2 1281 aa16.68■□□□□ 0.26
RAPGEF3-205ENST00000449771 SLC26A8Q96RN1 970 aa16.68■□□□□ 0.26
RAPGEF3-205ENST00000449771 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
RAPGEF3-205ENST00000449771 PAF1Q8N7H5 531 aa16.68■□□□□ 0.26
RAPGEF3-205ENST00000449771 ZNF396Q96N95 335 aaPredicted RBP16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 NEK4P51957 841 aa16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 CCDC69A6NI79 296 aa16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 GCC1Q96CN9 775 aa16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 BICDL1Q6ZP65 573 aa16.67■□□□□ 0.26
RAPGEF3-205ENST00000449771 KINO60870 393 aaKnown RBP16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 SYCP1Q15431 976 aa16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 NFKBIBQ15653 356 aa16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 RDXP35241 583 aaKnown RBP16.66■□□□□ 0.26
RAPGEF3-205ENST00000449771 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms