RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
CTC1-202ENST00000449476 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
CTC1-202ENST00000449476 PTPRKQ15262 1439 aa12.6□□□□□ -0.39
CTC1-202ENST00000449476 ZNF428Q96B54 188 aa12.6□□□□□ -0.39
CTC1-202ENST00000449476 ATF3P18847 181 aa12.6□□□□□ -0.39
CTC1-202ENST00000449476 SKAP1Q86WV1 359 aa12.6□□□□□ -0.39
CTC1-202ENST00000449476 SYTL4Q96C24 671 aaPredicted RBP12.6□□□□□ -0.39
CTC1-202ENST00000449476 GPRASP1Q5JY77 1395 aa12.59□□□□□ -0.39
CTC1-202ENST00000449476 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
CTC1-202ENST00000449476 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
CTC1-202ENST00000449476 ESCO1Q5FWF5 840 aa12.59□□□□□ -0.39
CTC1-202ENST00000449476 SLC26A8Q96RN1 970 aa12.59□□□□□ -0.39
CTC1-202ENST00000449476 ADGRF5Q8IZF2 1346 aa12.58□□□□□ -0.39
CTC1-202ENST00000449476 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.39
CTC1-202ENST00000449476 CCT4P50991 539 aaKnown RBP12.58□□□□□ -0.39
CTC1-202ENST00000449476 TRIM29Q14134 588 aa12.58□□□□□ -0.39
CTC1-202ENST00000449476 FAM43AQ8N2R8 423 aa12.58□□□□□ -0.39
CTC1-202ENST00000449476 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.39
CTC1-202ENST00000449476 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
CTC1-202ENST00000449476 NFE2L2Q16236 605 aa12.58□□□□□ -0.4
CTC1-202ENST00000449476 KIF14Q15058 1648 aa12.58□□□□□ -0.4
CTC1-202ENST00000449476 MCM2P49736 904 aa12.58□□□□□ -0.4
CTC1-202ENST00000449476 FSD1Q9BTV5 496 aa12.58□□□□□ -0.4
CTC1-202ENST00000449476 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
CTC1-202ENST00000449476 BRPF3Q9ULD4 1205 aa12.58□□□□□ -0.4
CTC1-202ENST00000449476 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.58□□□□□ -0.4
CTC1-202ENST00000449476 CAVIN1Q6NZI2 390 aaKnown RBP12.57□□□□□ -0.4
CTC1-202ENST00000449476 G3V3G9 751 aa12.57□□□□□ -0.4
CTC1-202ENST00000449476 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
CTC1-202ENST00000449476 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
CTC1-202ENST00000449476 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
CTC1-202ENST00000449476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.57□□□□□ -0.4
CTC1-202ENST00000449476 TPD52L1Q16890 204 aaPredicted RBP12.56□□□□□ -0.4
CTC1-202ENST00000449476 PES1O00541 588 aaKnown RBP12.56□□□□□ -0.4
CTC1-202ENST00000449476 TPM3P06753 285 aa12.56□□□□□ -0.4
CTC1-202ENST00000449476 DUSP27Q5VZP5 1158 aa12.56□□□□□ -0.4
CTC1-202ENST00000449476 THEMISQ8N1K5 641 aaPredicted RBP12.56□□□□□ -0.4
CTC1-202ENST00000449476 SSH1Q8WYL5 1049 aa12.56□□□□□ -0.4
CTC1-202ENST00000449476 PRPF40AO75400 957 aaKnown RBP12.56□□□□□ -0.4
CTC1-202ENST00000449476 FOSBP53539 338 aa12.56□□□□□ -0.4
CTC1-202ENST00000449476 ZNF608Q9ULD9 1512 aaPredicted RBP12.56□□□□□ -0.4
CTC1-202ENST00000449476 THOC2Q8NI27 1593 aaKnown RBP12.56□□□□□ -0.4
CTC1-202ENST00000449476 MBD3O95983 291 aa12.56□□□□□ -0.4
CTC1-202ENST00000449476 PSMA5P28066 241 aa12.56□□□□□ -0.4
CTC1-202ENST00000449476 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
CTC1-202ENST00000449476 SASS6Q6UVJ0 657 aa12.56□□□□□ -0.4
CTC1-202ENST00000449476 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
CTC1-202ENST00000449476 LRRCC1Q9C099 1032 aa12.56□□□□□ -0.4
CTC1-202ENST00000449476 WASHC4Q2M389 1173 aa12.55□□□□□ -0.4
CTC1-202ENST00000449476 MARCH6O60337 910 aa12.55□□□□□ -0.4
CTC1-202ENST00000449476 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
CTC1-202ENST00000449476 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
CTC1-202ENST00000449476 CCDC73Q6ZRK6 1079 aa12.55□□□□□ -0.4
CTC1-202ENST00000449476 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
CTC1-202ENST00000449476 NKTRP30414 1462 aaKnown RBP12.54□□□□□ -0.4
CTC1-202ENST00000449476 K7ELQ4 463 aaPredicted RBP12.54□□□□□ -0.4
CTC1-202ENST00000449476 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
CTC1-202ENST00000449476 NFXL1Q6ZNB6 911 aa12.54□□□□□ -0.4
CTC1-202ENST00000449476 RPAP2Q8IXW5 612 aaPredicted RBP12.54□□□□□ -0.4
CTC1-202ENST00000449476 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
CTC1-202ENST00000449476 ZNF530Q6P9A1 599 aaPredicted RBP12.54□□□□□ -0.4
CTC1-202ENST00000449476 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
CTC1-202ENST00000449476 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
CTC1-202ENST00000449476 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.53□□□□□ -0.4
CTC1-202ENST00000449476 VPS37DQ86XT2 251 aa12.53□□□□□ -0.4
CTC1-202ENST00000449476 ERC1Q8IUD2 1116 aa12.53□□□□□ -0.4
CTC1-202ENST00000449476 PROSER2Q86WR7 435 aaPredicted RBP12.52□□□□□ -0.4
CTC1-202ENST00000449476 ADGRL1O94910 1474 aa12.52□□□□□ -0.41
CTC1-202ENST00000449476 SCAF11Q99590 1463 aaKnown RBP12.52□□□□□ -0.41
CTC1-202ENST00000449476 MCM4P33991 863 aa12.52□□□□□ -0.41
CTC1-202ENST00000449476 IDI1Q13907 227 aa12.52□□□□□ -0.41
CTC1-202ENST00000449476 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.41
CTC1-202ENST00000449476 FAM13BQ9NYF5 915 aa12.52□□□□□ -0.41
CTC1-202ENST00000449476 LRPPRCP42704 1394 aaKnown RBP12.52□□□□□ -0.41
CTC1-202ENST00000449476 DNAJC2Q99543 621 aaKnown RBP12.52□□□□□ -0.41
CTC1-202ENST00000449476 CD109Q6YHK3 1445 aa12.51□□□□□ -0.41
CTC1-202ENST00000449476 HIP1O00291 1037 aa12.51□□□□□ -0.41
CTC1-202ENST00000449476 PDCP20941 246 aa12.51□□□□□ -0.41
CTC1-202ENST00000449476 TSR1Q2NL82 804 aaKnown RBP12.51□□□□□ -0.41
CTC1-202ENST00000449476 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
CTC1-202ENST00000449476 FBXW7Q969H0 707 aa12.51□□□□□ -0.41
CTC1-202ENST00000449476 TPM1P09493 284 aa12.51□□□□□ -0.41
CTC1-202ENST00000449476 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
CTC1-202ENST00000449476 ABCC11Q96J66 1382 aa12.51□□□□□ -0.41
CTC1-202ENST00000449476 FIBPO43427 364 aa12.5□□□□□ -0.41
CTC1-202ENST00000449476 CCAR2Q8N163 923 aaKnown RBP12.5□□□□□ -0.41
CTC1-202ENST00000449476 UGGT2Q9NYU1 1516 aa12.5□□□□□ -0.41
CTC1-202ENST00000449476 ERICH2A1L162 156 aa12.5□□□□□ -0.41
CTC1-202ENST00000449476 SRGAP3O43295 1099 aa12.5□□□□□ -0.41
CTC1-202ENST00000449476 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
CTC1-202ENST00000449476 NOC3LQ8WTT2 800 aaKnown RBP12.5□□□□□ -0.41
CTC1-202ENST00000449476 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
CTC1-202ENST00000449476 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
CTC1-202ENST00000449476 MCM10Q7L590 875 aa12.5□□□□□ -0.41
CTC1-202ENST00000449476 SDF4Q9BRK5 362 aa12.5□□□□□ -0.41
CTC1-202ENST00000449476 IL1RAPL2Q9NP60 686 aa12.5□□□□□ -0.41
CTC1-202ENST00000449476 SAFBQ15424 915 aaKnown RBP eCLIP12.49□□□□□ -0.41
CTC1-202ENST00000449476 NOL10Q9BSC4 688 aaKnown RBP12.49□□□□□ -0.41
CTC1-202ENST00000449476 NME9Q86XW9 330 aa12.49□□□□□ -0.41
CTC1-202ENST00000449476 MIS18AQ9NYP9 233 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms