RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.33■□□□□ 0.04
AC006001.3-201ENST00000449307 SYCP1Q15431 976 aa15.32■□□□□ 0.04
AC006001.3-201ENST00000449307 C16orf71Q8IYS4 520 aaPredicted RBP15.32■□□□□ 0.04
AC006001.3-201ENST00000449307 CLASRPQ8N2M8 674 aaKnown RBP15.32■□□□□ 0.04
AC006001.3-201ENST00000449307 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
AC006001.3-201ENST00000449307 INTS3Q68E01 1043 aaKnown RBP15.31■□□□□ 0.04
AC006001.3-201ENST00000449307 BCL11BQ9C0K0 894 aaPredicted RBP15.31■□□□□ 0.04
AC006001.3-201ENST00000449307 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
AC006001.3-201ENST00000449307 CENPQQ7L2Z9 268 aaPredicted RBP15.31■□□□□ 0.04
AC006001.3-201ENST00000449307 CFAP70Q5T0N1 1121 aa15.31■□□□□ 0.04
AC006001.3-201ENST00000449307 LNPKQ9C0E8 428 aa15.31■□□□□ 0.04
AC006001.3-201ENST00000449307 RAI14Q9P0K7 980 aa15.3■□□□□ 0.04
AC006001.3-201ENST00000449307 HMGB2P26583 209 aaKnown RBP15.3■□□□□ 0.04
AC006001.3-201ENST00000449307 ZNF76P36508 570 aa15.3■□□□□ 0.04
AC006001.3-201ENST00000449307 SULT6B1Q6IMI4 303 aa15.3■□□□□ 0.04
AC006001.3-201ENST00000449307 SCLT1Q96NL6 688 aa15.3■□□□□ 0.04
AC006001.3-201ENST00000449307 ANKIB1Q9P2G1 1089 aa15.3■□□□□ 0.04
AC006001.3-201ENST00000449307 BTBD11A6QL63 1104 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 TNNT3P45378 269 aaPredicted RBP15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 SASS6Q6UVJ0 657 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 PRKAR2BP31323 418 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 IGHMBP2P38935 993 aaKnown RBP15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 FKBP4Q02790 459 aaKnown RBP eCLIP15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 HDGFL1Q5TGJ6 251 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 PDCL3Q9H2J4 239 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 OLFM4Q6UX06 510 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 HOMER1Q86YM7 354 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 NUP133Q8WUM0 1156 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 CCDC73Q6ZRK6 1079 aa15.29■□□□□ 0.04
AC006001.3-201ENST00000449307 DDX11L8A8MPP1 907 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 PIBF1Q8WXW3 757 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 CABP1Q9NZU7 370 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 STARD3NLO95772 234 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 TMOD3Q9NYL9 352 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 SOGA3Q5TF21 947 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 WDR70Q9NW82 654 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 USP5P45974 858 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 ZNF652Q9Y2D9 606 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 PDILTQ8N807 584 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 NACAP1Q9BZK3 213 aa15.28■□□□□ 0.04
AC006001.3-201ENST00000449307 PTCD1O75127 700 aaKnown RBP15.27■□□□□ 0.04
AC006001.3-201ENST00000449307 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.04
AC006001.3-201ENST00000449307 PSMA5P28066 241 aa15.27■□□□□ 0.04
AC006001.3-201ENST00000449307 FYCO1Q9BQS8 1478 aa15.27■□□□□ 0.04
AC006001.3-201ENST00000449307 TXLNAP40222 546 aa15.27■□□□□ 0.04
AC006001.3-201ENST00000449307 TTLL5Q6EMB2 1281 aa15.27■□□□□ 0.03
AC006001.3-201ENST00000449307 RPGRQ92834 1020 aaKnown RBP15.27■□□□□ 0.03
AC006001.3-201ENST00000449307 CRACR2BQ8N4Y2 399 aaPredicted RBP15.27■□□□□ 0.03
AC006001.3-201ENST00000449307 CCDC69A6NI79 296 aa15.26■□□□□ 0.03
AC006001.3-201ENST00000449307 MPRIPQ6WCQ1 1025 aa15.26■□□□□ 0.03
AC006001.3-201ENST00000449307 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
AC006001.3-201ENST00000449307 EXOC6Q8TAG9 804 aa15.26■□□□□ 0.03
AC006001.3-201ENST00000449307 CCDC97Q96F63 343 aaPredicted RBP15.26■□□□□ 0.03
AC006001.3-201ENST00000449307 RTEL1-TNFRSF6BF6WH68 1400 aa15.26■□□□□ 0.03
AC006001.3-201ENST00000449307 UBAP1LF5GYI3 381 aa15.26■□□□□ 0.03
AC006001.3-201ENST00000449307 DEKP35659 375 aaKnown RBP15.26■□□□□ 0.03
AC006001.3-201ENST00000449307 LRP2BPQ9P2M1 347 aa15.26■□□□□ 0.03
AC006001.3-201ENST00000449307 RDXP35241 583 aaKnown RBP15.25■□□□□ 0.03
AC006001.3-201ENST00000449307 MAP4K4O95819 1239 aaPredicted RBP15.25■□□□□ 0.03
AC006001.3-201ENST00000449307 NEBLO76041 1014 aa15.25■□□□□ 0.03
AC006001.3-201ENST00000449307 CA8P35219 290 aa15.25■□□□□ 0.03
AC006001.3-201ENST00000449307 RBM19Q9Y4C8 960 aaKnown RBP15.25■□□□□ 0.03
AC006001.3-201ENST00000449307 RRS1Q15050 365 aaKnown RBP15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 GNAI3P08754 354 aa15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 TDO2P48775 406 aa15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 ZNF622Q969S3 477 aaKnown RBP eCLIP15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 AK7Q96M32 723 aa15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 RRP1P56182 461 aaKnown RBP15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 ERC1Q8IUD2 1116 aa15.24■□□□□ 0.03
AC006001.3-201ENST00000449307 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
AC006001.3-201ENST00000449307 ABCF2Q9UG63 623 aa15.23■□□□□ 0.03
AC006001.3-201ENST00000449307 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
AC006001.3-201ENST00000449307 C1orf115Q9H7X2 142 aa15.23■□□□□ 0.03
AC006001.3-201ENST00000449307 SKIDA1Q1XH10 827 aa15.23■□□□□ 0.03
AC006001.3-201ENST00000449307 CCDC173Q0VFZ6 552 aa15.23■□□□□ 0.03
AC006001.3-201ENST00000449307 WWC3Q9ULE0 1092 aa15.23■□□□□ 0.03
AC006001.3-201ENST00000449307 PNISRQ8TF01 805 aaKnown RBP15.22■□□□□ 0.03
AC006001.3-201ENST00000449307 GRIN2BQ13224 1484 aa15.22■□□□□ 0.03
AC006001.3-201ENST00000449307 SSBP05455 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
AC006001.3-201ENST00000449307 PANK1Q8TE04 598 aa15.21■□□□□ 0.03
AC006001.3-201ENST00000449307 RUFY1Q96T51 708 aa15.21■□□□□ 0.03
AC006001.3-201ENST00000449307 POLR3DP05423 398 aaPredicted RBP15.21■□□□□ 0.03
AC006001.3-201ENST00000449307 TWISTNBQ3B726 338 aaPredicted RBP15.21■□□□□ 0.03
AC006001.3-201ENST00000449307 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
AC006001.3-201ENST00000449307 ANKRD50Q9ULJ7 1429 aa15.21■□□□□ 0.02
AC006001.3-201ENST00000449307 CEBPZQ03701 1054 aaKnown RBP15.21■□□□□ 0.02
AC006001.3-201ENST00000449307 GPS2Q13227 327 aa15.21■□□□□ 0.02
AC006001.3-201ENST00000449307 SETQ01105 290 aaPredicted RBP15.2■□□□□ 0.02
AC006001.3-201ENST00000449307 GNAI2P04899 355 aa15.2■□□□□ 0.02
AC006001.3-201ENST00000449307 CAGE1Q8TC20 777 aa15.2■□□□□ 0.02
AC006001.3-201ENST00000449307 SDF4Q9BRK5 362 aa15.2■□□□□ 0.02
AC006001.3-201ENST00000449307 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
AC006001.3-201ENST00000449307 STK3Q13188 491 aa15.2■□□□□ 0.02
AC006001.3-201ENST00000449307 ZSCAN25Q6NSZ9 544 aa15.2■□□□□ 0.02
AC006001.3-201ENST00000449307 CNTLNQ9NXG0 1405 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms