RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 TECPR2O15040 1411 aa22.16■■□□□ 1.14
CDKN1A-204ENST00000448526 PPIP5K1Q6PFW1 1433 aa22.16■■□□□ 1.14
CDKN1A-204ENST00000448526 NCKAP5LQ9HCH0 1330 aa22.15■■□□□ 1.14
CDKN1A-204ENST00000448526 DIAPH1O60610 1272 aaKnown RBP22.15■■□□□ 1.14
CDKN1A-204ENST00000448526 TMPOP42166 694 aaKnown RBP22.15■■□□□ 1.14
CDKN1A-204ENST00000448526 PANK1Q8TE04 598 aa22.15■■□□□ 1.14
CDKN1A-204ENST00000448526 TRIM35Q9UPQ4 493 aa22.15■■□□□ 1.14
CDKN1A-204ENST00000448526 FAM135BQ49AJ0 1406 aa22.14■■□□□ 1.14
CDKN1A-204ENST00000448526 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
CDKN1A-204ENST00000448526 ERICH6Q7L0X2 663 aa22.14■■□□□ 1.13
CDKN1A-204ENST00000448526 CPS1P31327 1500 aa22.14■■□□□ 1.13
CDKN1A-204ENST00000448526 ANP32AP39687 249 aaKnown RBP22.13■■□□□ 1.13
CDKN1A-204ENST00000448526 POLKQ9UBT6 870 aa22.13■■□□□ 1.13
CDKN1A-204ENST00000448526 MAP2P11137 1827 aaKnown RBP22.13■■□□□ 1.13
CDKN1A-204ENST00000448526 FRAT1Q92837 279 aaPredicted RBP22.13■■□□□ 1.13
CDKN1A-204ENST00000448526 SIRT1Q96EB6 747 aa22.13■■□□□ 1.13
CDKN1A-204ENST00000448526 CANXP27824 592 aaKnown RBP22.12■■□□□ 1.13
CDKN1A-204ENST00000448526 NUDT16Q96DE0 195 aaKnown RBP22.12■■□□□ 1.13
CDKN1A-204ENST00000448526 MYH16Q9H6N6 1097 aa22.12■■□□□ 1.13
CDKN1A-204ENST00000448526 TNNQ9UQP3 1299 aa22.12■■□□□ 1.13
CDKN1A-204ENST00000448526 COG6Q9Y2V7 657 aa22.12■■□□□ 1.13
CDKN1A-204ENST00000448526 ADAMTS13Q76LX8 1427 aa22.12■■□□□ 1.13
CDKN1A-204ENST00000448526 PAK3O75914 559 aaPredicted RBP22.12■■□□□ 1.13
CDKN1A-204ENST00000448526 BCL2L13Q9BXK5 485 aa22.12■■□□□ 1.13
CDKN1A-204ENST00000448526 EDC4Q6P2E9 1401 aaKnown RBP22.11■■□□□ 1.13
CDKN1A-204ENST00000448526 CEBPAP49715 358 aaPredicted RBP22.11■■□□□ 1.13
CDKN1A-204ENST00000448526 ZRANB1Q9UGI0 708 aa22.11■■□□□ 1.13
CDKN1A-204ENST00000448526 NME9Q86XW9 330 aa22.1■■□□□ 1.13
CDKN1A-204ENST00000448526 TSR2Q969E8 191 aaKnown RBP22.1■■□□□ 1.13
CDKN1A-204ENST00000448526 IPO9Q96P70 1041 aaKnown RBP22.1■■□□□ 1.13
CDKN1A-204ENST00000448526 MAPK8IP3Q9UPT6 1336 aa22.1■■□□□ 1.13
CDKN1A-204ENST00000448526 CDC42BPGQ6DT37 1551 aa22.1■■□□□ 1.13
CDKN1A-204ENST00000448526 ROBO2Q9HCK4 1378 aa22.1■■□□□ 1.13
CDKN1A-204ENST00000448526 LTKP29376 864 aa22.1■■□□□ 1.13
CDKN1A-204ENST00000448526 NOP58Q9Y2X3 529 aaKnown RBP22.1■■□□□ 1.13
CDKN1A-204ENST00000448526 PPM1GO15355 546 aaPredicted RBP22.09■■□□□ 1.13
CDKN1A-204ENST00000448526 IGHDP01880 384 aa22.09■■□□□ 1.13
CDKN1A-204ENST00000448526 RLBP1P12271 317 aa22.09■■□□□ 1.13
CDKN1A-204ENST00000448526 MON2Q7Z3U7 1717 aa22.08■■□□□ 1.13
CDKN1A-204ENST00000448526 PRR36Q9H6K5 1346 aa22.08■■□□□ 1.12
CDKN1A-204ENST00000448526 CCDC61Q9Y6R9 512 aa22.07■■□□□ 1.12
CDKN1A-204ENST00000448526 LRRC7Q96NW7 1537 aa22.07■■□□□ 1.12
CDKN1A-204ENST00000448526 NPM2Q86SE8 214 aaKnown RBP22.07■■□□□ 1.12
CDKN1A-204ENST00000448526 EMILIN1Q9Y6C2 1016 aa22.07■■□□□ 1.12
CDKN1A-204ENST00000448526 RIPK4P57078 832 aa22.06■■□□□ 1.12
CDKN1A-204ENST00000448526 CLUAP1Q96AJ1 413 aa22.06■■□□□ 1.12
CDKN1A-204ENST00000448526 AKAP12Q02952 1782 aa22.06■■□□□ 1.12
CDKN1A-204ENST00000448526 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
CDKN1A-204ENST00000448526 RSPH6AQ9H0K4 717 aa22.05■■□□□ 1.12
CDKN1A-204ENST00000448526 FCHSD2O94868 740 aa22.04■■□□□ 1.12
CDKN1A-204ENST00000448526 EXOSC9Q06265 439 aaKnown RBP22.04■■□□□ 1.12
CDKN1A-204ENST00000448526 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
CDKN1A-204ENST00000448526 ITSN1Q15811 1721 aa22.03■■□□□ 1.12
CDKN1A-204ENST00000448526 C3P01024 1663 aa22.03■■□□□ 1.12
CDKN1A-204ENST00000448526 PRKAR2BP31323 418 aa22.03■■□□□ 1.12
CDKN1A-204ENST00000448526 IL16Q14005 1332 aa22.02■■□□□ 1.12
CDKN1A-204ENST00000448526 PNNQ9H307 717 aaKnown RBP22.02■■□□□ 1.12
CDKN1A-204ENST00000448526 PTPRUQ92729 1446 aa22.01■■□□□ 1.11
CDKN1A-204ENST00000448526 RGS3P49796 1198 aa22.01■■□□□ 1.11
CDKN1A-204ENST00000448526 HMOX1P09601 288 aa22■■□□□ 1.11
CDKN1A-204ENST00000448526 IL13P35225 146 aa22■■□□□ 1.11
CDKN1A-204ENST00000448526 AATKQ6ZMQ8 1374 aa22■■□□□ 1.11
CDKN1A-204ENST00000448526 CT47B1P0C2W7 299 aaPredicted RBP22■■□□□ 1.11
CDKN1A-204ENST00000448526 SLC26A8Q96RN1 970 aa22■■□□□ 1.11
CDKN1A-204ENST00000448526 CDK12Q9NYV4 1490 aaPredicted RBP21.99■■□□□ 1.11
CDKN1A-204ENST00000448526 COG3Q96JB2 828 aa21.99■■□□□ 1.11
CDKN1A-204ENST00000448526 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
CDKN1A-204ENST00000448526 RRS1Q15050 365 aaKnown RBP21.98■■□□□ 1.11
CDKN1A-204ENST00000448526 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
CDKN1A-204ENST00000448526 C8orf34Q49A92 452 aa21.98■■□□□ 1.11
CDKN1A-204ENST00000448526 ZBTB47Q9UFB7 747 aaPredicted RBP21.98■■□□□ 1.11
CDKN1A-204ENST00000448526 PCDHB15Q9Y5E8 787 aa21.98■■□□□ 1.11
CDKN1A-204ENST00000448526 ZNF692Q9BU19 519 aaPredicted RBP21.97■■□□□ 1.11
CDKN1A-204ENST00000448526 NUTM2FA1L443 756 aa21.97■■□□□ 1.11
CDKN1A-204ENST00000448526 SSH1Q8WYL5 1049 aa21.97■■□□□ 1.11
CDKN1A-204ENST00000448526 TOPAZ1Q8N9V7 1692 aa21.96■■□□□ 1.11
CDKN1A-204ENST00000448526 ZKSCAN2Q63HK3 967 aa21.95■■□□□ 1.11
CDKN1A-204ENST00000448526 SMC4Q9NTJ3 1288 aa21.95■■□□□ 1.11
CDKN1A-204ENST00000448526 ARHGAP23Q9P227 1491 aa21.95■■□□□ 1.1
CDKN1A-204ENST00000448526 FAM161AQ3B820 660 aa21.95■■□□□ 1.1
CDKN1A-204ENST00000448526 SLIT1O75093 1534 aa21.95■■□□□ 1.1
CDKN1A-204ENST00000448526 FER1L4A9Z1Z3 1794 aa21.95■■□□□ 1.1
CDKN1A-204ENST00000448526 NRKQ7Z2Y5 1582 aa21.94■■□□□ 1.1
CDKN1A-204ENST00000448526 NFE2L2Q16236 605 aa21.94■■□□□ 1.1
CDKN1A-204ENST00000448526 EID1Q9Y6B2 187 aa21.94■■□□□ 1.1
CDKN1A-204ENST00000448526 ACEP12821 1306 aa21.93■■□□□ 1.1
CDKN1A-204ENST00000448526 MVPQ14764 893 aaKnown RBP21.93■■□□□ 1.1
CDKN1A-204ENST00000448526 AAMPQ13685 434 aa21.92■■□□□ 1.1
CDKN1A-204ENST00000448526 DZIP1LQ8IYY4 767 aaKnown RBP21.92■■□□□ 1.1
CDKN1A-204ENST00000448526 TTC21BQ7Z4L5 1316 aa21.92■■□□□ 1.1
CDKN1A-204ENST00000448526 THUMPD2Q9BTF0 503 aaKnown RBP21.92■■□□□ 1.1
CDKN1A-204ENST00000448526 PLEKHG3A1L390 1219 aa21.91■■□□□ 1.1
CDKN1A-204ENST00000448526 TRIM27P14373 513 aa21.91■■□□□ 1.1
CDKN1A-204ENST00000448526 AMOTL2Q9Y2J4 779 aa21.91■■□□□ 1.1
CDKN1A-204ENST00000448526 NEFMP07197 916 aa21.91■■□□□ 1.1
CDKN1A-204ENST00000448526 PMFBP1Q8TBY8 1022 aa21.9■■□□□ 1.1
CDKN1A-204ENST00000448526 FTSJ3Q8IY81 847 aaKnown RBP21.89■■□□□ 1.1
CDKN1A-204ENST00000448526 NOB1Q9ULX3 412 aaKnown RBP21.89■■□□□ 1.1
CDKN1A-204ENST00000448526 DLG5Q8TDM6 1919 aa21.89■■□□□ 1.09
CDKN1A-204ENST00000448526 TBX22Q9Y458 520 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms