RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 NGLY1Q96IV0 654 aa20.96■□□□□ 0.95
HDAC4-204ENST00000446876 ZNF772Q68DY9 489 aaPredicted RBP20.95■□□□□ 0.94
HDAC4-204ENST00000446876 TESK2Q96S53 571 aa20.95■□□□□ 0.94
HDAC4-204ENST00000446876 HAP1P54257 671 aaPredicted RBP20.94■□□□□ 0.94
HDAC4-204ENST00000446876 ATAD2Q6PL18 1390 aa20.94■□□□□ 0.94
HDAC4-204ENST00000446876 PHRF1Q9P1Y6 1649 aaKnown RBP20.93■□□□□ 0.94
HDAC4-204ENST00000446876 NUTM2GQ5VZR2 741 aa20.93■□□□□ 0.94
HDAC4-204ENST00000446876 USP6P35125 1406 aa20.92■□□□□ 0.94
HDAC4-204ENST00000446876 PLCH1Q4KWH8 1693 aa20.92■□□□□ 0.94
HDAC4-204ENST00000446876 MON2Q7Z3U7 1717 aa20.9■□□□□ 0.94
HDAC4-204ENST00000446876 NRKQ7Z2Y5 1582 aa20.89■□□□□ 0.94
HDAC4-204ENST00000446876 FNBP4Q8N3X1 1017 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-204ENST00000446876 USP21Q9UK80 565 aa20.89■□□□□ 0.93
HDAC4-204ENST00000446876 PIK3C2AO00443 1686 aa20.88■□□□□ 0.93
HDAC4-204ENST00000446876 BCL9LQ86UU0 1499 aa20.88■□□□□ 0.93
HDAC4-204ENST00000446876 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.87■□□□□ 0.93
HDAC4-204ENST00000446876 ABTB2Q8N961 1025 aa20.87■□□□□ 0.93
HDAC4-204ENST00000446876 TMC1Q8TDI8 760 aa20.87■□□□□ 0.93
HDAC4-204ENST00000446876 SLIT2O94813 1529 aa20.87■□□□□ 0.93
HDAC4-204ENST00000446876 CD163L1Q9NR16 1453 aa20.87■□□□□ 0.93
HDAC4-204ENST00000446876 CPSF1Q10570 1443 aaKnown RBP20.87■□□□□ 0.93
HDAC4-204ENST00000446876 SSH2Q76I76 1423 aa20.87■□□□□ 0.93
HDAC4-204ENST00000446876 SOCS7O14512 581 aa20.86■□□□□ 0.93
HDAC4-204ENST00000446876 QTRT2Q9H974 415 aaKnown RBP20.86■□□□□ 0.93
HDAC4-204ENST00000446876 SLC12A5Q9H2X9 1139 aa20.85■□□□□ 0.93
HDAC4-204ENST00000446876 NWD2Q9ULI1 1742 aa20.84■□□□□ 0.93
HDAC4-204ENST00000446876 ATRNO75882 1429 aa20.84■□□□□ 0.93
HDAC4-204ENST00000446876 COL14A1Q05707 1796 aaKnown RBP20.84■□□□□ 0.93
HDAC4-204ENST00000446876 BRD4O60885 1362 aaPredicted RBP20.84■□□□□ 0.93
HDAC4-204ENST00000446876 KTN1Q86UP2 1357 aaKnown RBP20.84■□□□□ 0.93
HDAC4-204ENST00000446876 FAM83GA6ND36 823 aa20.83■□□□□ 0.93
HDAC4-204ENST00000446876 RXRBP28702 533 aa20.83■□□□□ 0.93
HDAC4-204ENST00000446876 NRAPQ86VF7 1730 aa20.83■□□□□ 0.92
HDAC4-204ENST00000446876 USP19O94966 1318 aa20.81■□□□□ 0.92
HDAC4-204ENST00000446876 TTC21BQ7Z4L5 1316 aa20.81■□□□□ 0.92
HDAC4-204ENST00000446876 TMF1P82094 1093 aa20.81■□□□□ 0.92
HDAC4-204ENST00000446876 ZNF692Q9BU19 519 aaPredicted RBP20.81■□□□□ 0.92
HDAC4-204ENST00000446876 TRPC5Q9UL62 973 aaPredicted RBP20.81■□□□□ 0.92
HDAC4-204ENST00000446876 PUS7Q96PZ0 661 aaKnown RBP20.8■□□□□ 0.92
HDAC4-204ENST00000446876 A0A1W2PP64 1363 aa20.8■□□□□ 0.92
HDAC4-204ENST00000446876 KIAA0232Q92628 1395 aa20.8■□□□□ 0.92
HDAC4-204ENST00000446876 RGS12O14924 1447 aa20.79■□□□□ 0.92
HDAC4-204ENST00000446876 ZC3H6P61129 1189 aaKnown RBP20.79■□□□□ 0.92
HDAC4-204ENST00000446876 RBM6P78332 1123 aaKnown RBP20.79■□□□□ 0.92
HDAC4-204ENST00000446876 NLRP13Q86W25 1043 aa20.79■□□□□ 0.92
HDAC4-204ENST00000446876 UNC5CLQ8IV45 518 aa20.79■□□□□ 0.92
HDAC4-204ENST00000446876 SLIT3O75094 1523 aa20.78■□□□□ 0.92
HDAC4-204ENST00000446876 MYOM1P52179 1685 aa20.78■□□□□ 0.92
HDAC4-204ENST00000446876 GLI3P10071 1580 aa20.78■□□□□ 0.92
HDAC4-204ENST00000446876 NLRP6P59044 892 aa20.78■□□□□ 0.92
HDAC4-204ENST00000446876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.78■□□□□ 0.922e-6■■□□□ 13.5
HDAC4-204ENST00000446876 PRDM11Q9NQV5 511 aa20.78■□□□□ 0.92
HDAC4-204ENST00000446876 CDK12Q9NYV4 1490 aaPredicted RBP20.77■□□□□ 0.92
HDAC4-204ENST00000446876 SLC24A1O60721 1099 aa20.77■□□□□ 0.92
HDAC4-204ENST00000446876 HSPA5P11021 654 aaKnown RBP20.77■□□□□ 0.92
HDAC4-204ENST00000446876 CHRNA2Q15822 529 aa20.77■□□□□ 0.92
HDAC4-204ENST00000446876 HDGFL2Q7Z4V5 671 aaPredicted RBP20.77■□□□□ 0.92
HDAC4-204ENST00000446876 BTG4Q9NY30 223 aa20.76■□□□□ 0.91
HDAC4-204ENST00000446876 TTC21AQ8NDW8 1320 aa20.76■□□□□ 0.91
HDAC4-204ENST00000446876 NINLQ9Y2I6 1382 aa20.75■□□□□ 0.91
HDAC4-204ENST00000446876 EIF4G2P78344 907 aaKnown RBP eCLIP20.75■□□□□ 0.917e-7■■■■■ 38
HDAC4-204ENST00000446876 TERF2IPQ9NYB0 399 aa20.75■□□□□ 0.91
HDAC4-204ENST00000446876 ZRANB1Q9UGI0 708 aa20.75■□□□□ 0.91
HDAC4-204ENST00000446876 GCP02774 474 aa20.74■□□□□ 0.91
HDAC4-204ENST00000446876 EDC4Q6P2E9 1401 aaKnown RBP20.74■□□□□ 0.91
HDAC4-204ENST00000446876 USP54Q70EL1 1684 aa20.73■□□□□ 0.91
HDAC4-204ENST00000446876 LMO7Q8WWI1 1683 aa20.73■□□□□ 0.91
HDAC4-204ENST00000446876 NME9Q86XW9 330 aa20.73■□□□□ 0.91
HDAC4-204ENST00000446876 GJD4Q96KN9 370 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-204ENST00000446876 ZBTB7CA1YPR0 619 aa20.72■□□□□ 0.91
HDAC4-204ENST00000446876 SOX12O15370 315 aa20.72■□□□□ 0.91
HDAC4-204ENST00000446876 CPDO75976 1380 aa20.72■□□□□ 0.91
HDAC4-204ENST00000446876 VPS72Q15906 364 aa20.71■□□□□ 0.91
HDAC4-204ENST00000446876 CCDC9Q9Y3X0 531 aaKnown RBP20.71■□□□□ 0.91
HDAC4-204ENST00000446876 ANKRD36BQ8N2N9 1353 aa20.71■□□□□ 0.91
HDAC4-204ENST00000446876 NFAT5O94916 1531 aa20.7■□□□□ 0.9
HDAC4-204ENST00000446876 CDCA8Q53HL2 280 aa20.7■□□□□ 0.9
HDAC4-204ENST00000446876 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.9
HDAC4-204ENST00000446876 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
HDAC4-204ENST00000446876 COL18A1P39060 1754 aa20.68■□□□□ 0.9
HDAC4-204ENST00000446876 STRN4Q9NRL3 753 aa20.68■□□□□ 0.9
HDAC4-204ENST00000446876 USP31Q70CQ4 1352 aa20.68■□□□□ 0.9
HDAC4-204ENST00000446876 RGPD5Q99666 1765 aa20.67■□□□□ 0.9
HDAC4-204ENST00000446876 BRWD3Q6RI45 1802 aa20.67■□□□□ 0.9
HDAC4-204ENST00000446876 OVOS2A0A0J9YW53 1432 aa20.66■□□□□ 0.9
HDAC4-204ENST00000446876 OVOS2Q6IE36 1432 aa20.66■□□□□ 0.9
HDAC4-204ENST00000446876 LTN1O94822 1766 aa20.66■□□□□ 0.9
HDAC4-204ENST00000446876 KIF20BQ96Q89 1820 aa20.65■□□□□ 0.9
HDAC4-204ENST00000446876 KCNH5Q8NCM2 988 aa20.64■□□□□ 0.89
HDAC4-204ENST00000446876 COL5A2P05997 1499 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-204ENST00000446876 SPATA31A5Q5VU36 1347 aa20.63■□□□□ 0.89
HDAC4-204ENST00000446876 SPATA31A7Q8IWB4 1347 aa20.63■□□□□ 0.89
HDAC4-204ENST00000446876 AATKQ6ZMQ8 1374 aa20.62■□□□□ 0.89
HDAC4-204ENST00000446876 C11orf95C9JLR9 678 aaPredicted RBP20.62■□□□□ 0.89
HDAC4-204ENST00000446876 ARHGEF25Q86VW2 580 aa20.62■□□□□ 0.89
HDAC4-204ENST00000446876 EVA1CP58658 441 aa20.61■□□□□ 0.89
HDAC4-204ENST00000446876 FAM98CQ17RN3 349 aaKnown RBP20.61■□□□□ 0.89
HDAC4-204ENST00000446876 LARP1Q6PKG0 1096 aaKnown RBP20.61■□□□□ 0.89
HDAC4-204ENST00000446876 NSD3Q9BZ95 1437 aa20.61■□□□□ 0.89
HDAC4-204ENST00000446876 SEPT12Q8IYM1 358 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms