RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 FAM161AQ3B820 660 aa16.09■□□□□ 0.17
ERBB2-203ENST00000445658 ABCC11Q96J66 1382 aa16.09■□□□□ 0.17
ERBB2-203ENST00000445658 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
ERBB2-203ENST00000445658 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.16
ERBB2-203ENST00000445658 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
ERBB2-203ENST00000445658 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
ERBB2-203ENST00000445658 ZNF521Q96K83 1311 aa16.07■□□□□ 0.16
ERBB2-203ENST00000445658 MTHFSP49914 203 aa16.07■□□□□ 0.16
ERBB2-203ENST00000445658 CGNL1Q0VF96 1302 aa16.07■□□□□ 0.16
ERBB2-203ENST00000445658 BCL2L13Q9BXK5 485 aa16.06■□□□□ 0.16
ERBB2-203ENST00000445658 A0A1W2PP64 1363 aa16.05■□□□□ 0.16
ERBB2-203ENST00000445658 CENPQQ7L2Z9 268 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-203ENST00000445658 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-203ENST00000445658 FAM135BQ49AJ0 1406 aa16.05■□□□□ 0.16
ERBB2-203ENST00000445658 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
ERBB2-203ENST00000445658 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
ERBB2-203ENST00000445658 TXNDC2Q86VQ3 553 aa16.04■□□□□ 0.16
ERBB2-203ENST00000445658 GZF1Q9H116 711 aaPredicted RBP16.04■□□□□ 0.16
ERBB2-203ENST00000445658 COG6Q9Y2V7 657 aa16.04■□□□□ 0.16
ERBB2-203ENST00000445658 ATP7BP35670 1465 aa16.04■□□□□ 0.16
ERBB2-203ENST00000445658 ADGRB2O60241 1585 aa16.04■□□□□ 0.16
ERBB2-203ENST00000445658 SIRT1Q96EB6 747 aa16.04■□□□□ 0.16
ERBB2-203ENST00000445658 PLEKHH1Q9ULM0 1364 aa16.03■□□□□ 0.16
ERBB2-203ENST00000445658 SLIT1O75093 1534 aa16.03■□□□□ 0.16
ERBB2-203ENST00000445658 C8orf34Q49A92 452 aa16.03■□□□□ 0.16
ERBB2-203ENST00000445658 CLUAP1Q96AJ1 413 aa16.03■□□□□ 0.16
ERBB2-203ENST00000445658 AKAP12Q02952 1782 aa16.03■□□□□ 0.16
ERBB2-203ENST00000445658 DUSP27Q5VZP5 1158 aa16.03■□□□□ 0.16
ERBB2-203ENST00000445658 PANK1Q8TE04 598 aa16.03■□□□□ 0.16
ERBB2-203ENST00000445658 MON2Q7Z3U7 1717 aa16.02■□□□□ 0.16
ERBB2-203ENST00000445658 NGEFQ8N5V2 710 aa16.02■□□□□ 0.16
ERBB2-203ENST00000445658 HDGFP51858 240 aaKnown RBP16.02■□□□□ 0.15
ERBB2-203ENST00000445658 IQSEC2Q5JU85 1478 aa16.01■□□□□ 0.15
ERBB2-203ENST00000445658 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
ERBB2-203ENST00000445658 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
ERBB2-203ENST00000445658 METP08581 1390 aa16.01■□□□□ 0.15
ERBB2-203ENST00000445658 A0A0U1RQG5 324 aaPredicted RBP16.01■□□□□ 0.15
ERBB2-203ENST00000445658 SEC24BO95487 1268 aa16.01■□□□□ 0.15
ERBB2-203ENST00000445658 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
ERBB2-203ENST00000445658 CFAP53Q96M91 514 aa16■□□□□ 0.15
ERBB2-203ENST00000445658 ZMYND15Q9H091 742 aa16■□□□□ 0.15
ERBB2-203ENST00000445658 TOPAZ1Q8N9V7 1692 aa16■□□□□ 0.15
ERBB2-203ENST00000445658 IGHDP01880 384 aa16■□□□□ 0.15
ERBB2-203ENST00000445658 ADAMTS13Q76LX8 1427 aa16■□□□□ 0.15
ERBB2-203ENST00000445658 PLEKHG1Q9ULL1 1385 aa15.99■□□□□ 0.15
ERBB2-203ENST00000445658 NCKAP5LQ9HCH0 1330 aa15.99■□□□□ 0.15
ERBB2-203ENST00000445658 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
ERBB2-203ENST00000445658 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
ERBB2-203ENST00000445658 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
ERBB2-203ENST00000445658 SLC26A8Q96RN1 970 aa15.98■□□□□ 0.15
ERBB2-203ENST00000445658 CDK19Q9BWU1 502 aa15.98■□□□□ 0.15
ERBB2-203ENST00000445658 DIP2AQ14689 1571 aa15.98■□□□□ 0.15
ERBB2-203ENST00000445658 TERF2IPQ9NYB0 399 aa15.98■□□□□ 0.15
ERBB2-203ENST00000445658 CDC42BPGQ6DT37 1551 aa15.97■□□□□ 0.15
ERBB2-203ENST00000445658 TRMT2AQ8IZ69 625 aaKnown RBP15.97■□□□□ 0.15
ERBB2-203ENST00000445658 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.96■□□□□ 0.15
ERBB2-203ENST00000445658 GLIPR1L2Q4G1C9 344 aa15.96■□□□□ 0.15
ERBB2-203ENST00000445658 KDM2BQ8NHM5 1336 aa15.96■□□□□ 0.14
ERBB2-203ENST00000445658 CPSF1Q10570 1443 aaKnown RBP15.95■□□□□ 0.14
ERBB2-203ENST00000445658 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
ERBB2-203ENST00000445658 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
ERBB2-203ENST00000445658 HDGFL2Q7Z4V5 671 aaPredicted RBP15.94■□□□□ 0.14
ERBB2-203ENST00000445658 NRKQ7Z2Y5 1582 aa15.94■□□□□ 0.14
ERBB2-203ENST00000445658 RIMS1Q86UR5 1692 aaKnown RBP15.94■□□□□ 0.14
ERBB2-203ENST00000445658 RBM33Q96EV2 1170 aaKnown RBP15.93■□□□□ 0.14
ERBB2-203ENST00000445658 TNNQ9UQP3 1299 aa15.93■□□□□ 0.14
ERBB2-203ENST00000445658 ZNF142P52746 1687 aaPredicted RBP15.93■□□□□ 0.14
ERBB2-203ENST00000445658 SLFN5Q08AF3 891 aa15.93■□□□□ 0.14
ERBB2-203ENST00000445658 HMOX1P09601 288 aa15.92■□□□□ 0.14
ERBB2-203ENST00000445658 FYB1O15117 783 aa15.92■□□□□ 0.14
ERBB2-203ENST00000445658 C14orf37Q86TY3 774 aa15.92■□□□□ 0.14
ERBB2-203ENST00000445658 XRN1Q8IZH2 1706 aaKnown RBP15.91■□□□□ 0.14
ERBB2-203ENST00000445658 WASLO00401 505 aaPredicted RBP15.91■□□□□ 0.14
ERBB2-203ENST00000445658 MAPK8IP3Q9UPT6 1336 aa15.91■□□□□ 0.14
ERBB2-203ENST00000445658 ZRANB1Q9UGI0 708 aa15.91■□□□□ 0.14
ERBB2-203ENST00000445658 EDC4Q6P2E9 1401 aaKnown RBP15.91■□□□□ 0.14
ERBB2-203ENST00000445658 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
ERBB2-203ENST00000445658 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
ERBB2-203ENST00000445658 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
ERBB2-203ENST00000445658 NKTRP30414 1462 aaKnown RBP15.9■□□□□ 0.14
ERBB2-203ENST00000445658 PNPLA6Q8IY17 1366 aa15.9■□□□□ 0.14
ERBB2-203ENST00000445658 PPIP5K1Q6PFW1 1433 aa15.9■□□□□ 0.14
ERBB2-203ENST00000445658 TSR2Q969E8 191 aaKnown RBP15.89■□□□□ 0.13
ERBB2-203ENST00000445658 RUNDC1Q96C34 613 aa15.89■□□□□ 0.13
ERBB2-203ENST00000445658 CEP170BQ9Y4F5 1589 aaPredicted RBP15.89■□□□□ 0.13
ERBB2-203ENST00000445658 ELL2O00472 640 aaPredicted RBP15.89■□□□□ 0.13
ERBB2-203ENST00000445658 LTKP29376 864 aa15.89■□□□□ 0.13
ERBB2-203ENST00000445658 BECN1Q14457 450 aa15.89■□□□□ 0.13
ERBB2-203ENST00000445658 UPF2Q9HAU5 1272 aaKnown RBP15.89■□□□□ 0.13
ERBB2-203ENST00000445658 ROBO2Q9HCK4 1378 aa15.88■□□□□ 0.13
ERBB2-203ENST00000445658 ADAMTSL3P82987 1691 aa15.88■□□□□ 0.13
ERBB2-203ENST00000445658 PTCH1Q13635 1447 aa15.88■□□□□ 0.13
ERBB2-203ENST00000445658 PTPRUQ92729 1446 aa15.88■□□□□ 0.13
ERBB2-203ENST00000445658 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
ERBB2-203ENST00000445658 E9PSI1 815 aa15.87■□□□□ 0.13
ERBB2-203ENST00000445658 NALCNQ8IZF0 1738 aa15.87■□□□□ 0.13
ERBB2-203ENST00000445658 RRS1Q15050 365 aaKnown RBP15.87■□□□□ 0.13
ERBB2-203ENST00000445658 WWC1Q8IX03 1113 aa15.87■□□□□ 0.13
ERBB2-203ENST00000445658 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
ERBB2-203ENST00000445658 NUTM2GQ5VZR2 741 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms