RNA–Protein interactions for RNA: ENST00000445514.1

LINC01828-201, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 4 BASIC

Gene LINC01828, Length 531 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-201ENST00000445514 USP35Q9P2H5 1018 aa8.81□□□□□ -1
LINC01828-201ENST00000445514 RETREG2Q8NC44 543 aa8.8□□□□□ -1
LINC01828-201ENST00000445514 ZNF777Q9ULD5 760 aaPredicted RBP8.8□□□□□ -1
LINC01828-201ENST00000445514 DXOO77932 396 aaKnown RBP8.79□□□□□ -1
LINC01828-201ENST00000445514 GPIHBP1Q8IV16 184 aa8.79□□□□□ -1
LINC01828-201ENST00000445514 PLEKHG3A1L390 1219 aa8.78□□□□□ -1
LINC01828-201ENST00000445514 SKOR1P84550 965 aa8.78□□□□□ -1
LINC01828-201ENST00000445514 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
LINC01828-201ENST00000445514 Q3C1V9 767 aa8.77□□□□□ -1.01
LINC01828-201ENST00000445514 REPIN1Q9BWE0 567 aaKnown RBP8.77□□□□□ -1.01
LINC01828-201ENST00000445514 IRF5Q13568 498 aa8.76□□□□□ -1.01
LINC01828-201ENST00000445514 RC3H1Q5TC82 1133 aaKnown RBP8.76□□□□□ -1.01
LINC01828-201ENST00000445514 HLA-CQ95604 372 aa8.76□□□□□ -1.01
LINC01828-201ENST00000445514 KIFC2Q96AC6 838 aa8.76□□□□□ -1.01
LINC01828-201ENST00000445514 USB1Q9BQ65 265 aaKnown RBP8.76□□□□□ -1.01
LINC01828-201ENST00000445514 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
LINC01828-201ENST00000445514 CD46P15529 392 aa8.75□□□□□ -1.01
LINC01828-201ENST00000445514 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
LINC01828-201ENST00000445514 CCDC24Q8N4L8 307 aa8.74□□□□□ -1.01
LINC01828-201ENST00000445514 GOPCQ9HD26 462 aa8.74□□□□□ -1.01
LINC01828-201ENST00000445514 AMOTL2Q9Y2J4 779 aa8.74□□□□□ -1.01
LINC01828-201ENST00000445514 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
LINC01828-201ENST00000445514 KDM4AO75164 1064 aa8.72□□□□□ -1.01
LINC01828-201ENST00000445514 BMP1P13497 986 aa8.72□□□□□ -1.01
LINC01828-201ENST00000445514 GMPRP36959 345 aa8.72□□□□□ -1.01
LINC01828-201ENST00000445514 WNT7BP56706 349 aa8.72□□□□□ -1.01
LINC01828-201ENST00000445514 PDE4CQ08493 712 aa8.72□□□□□ -1.01
LINC01828-201ENST00000445514 ALDH1A1P00352 501 aa8.71□□□□□ -1.02
LINC01828-201ENST00000445514 TRIM46Q7Z4K8 759 aa8.71□□□□□ -1.02
LINC01828-201ENST00000445514 NXF1Q9UBU9 619 aaKnown RBP8.71□□□□□ -1.02
LINC01828-201ENST00000445514 MCM6Q14566 821 aa8.7□□□□□ -1.02
LINC01828-201ENST00000445514 FAM177A1Q8N128 213 aaPredicted RBP8.7□□□□□ -1.02
LINC01828-201ENST00000445514 VEGFBP49765 207 aa8.69□□□□□ -1.02
LINC01828-201ENST00000445514 GUCA2AQ02747 115 aa8.69□□□□□ -1.02
LINC01828-201ENST00000445514 FNBP4Q8N3X1 1017 aaPredicted RBP8.69□□□□□ -1.02
LINC01828-201ENST00000445514 SLC16A10Q8TF71 515 aa8.69□□□□□ -1.02
LINC01828-201ENST00000445514 SIAH2O43255 324 aa8.68□□□□□ -1.02
LINC01828-201ENST00000445514 HOXA2O43364 376 aa8.67□□□□□ -1.02
LINC01828-201ENST00000445514 PPP1R15AO75807 674 aaPredicted RBP8.67□□□□□ -1.02
LINC01828-201ENST00000445514 ERBB4Q15303 1308 aa8.66□□□□□ -1.02
LINC01828-201ENST00000445514 JUNDP17535 347 aa8.66□□□□□ -1.02
LINC01828-201ENST00000445514 PTCRAQ6ISU1 281 aaPredicted RBP8.66□□□□□ -1.02
LINC01828-201ENST00000445514 ZSCAN1Q8NBB4 408 aa8.66□□□□□ -1.02
LINC01828-201ENST00000445514 SYMPKQ92797 1274 aaKnown RBP8.66□□□□□ -1.02
LINC01828-201ENST00000445514 PCMTD1Q96MG8 357 aaPredicted RBP8.66□□□□□ -1.02
LINC01828-201ENST00000445514 FAM181BA6NEQ2 426 aa8.65□□□□□ -1.02
LINC01828-201ENST00000445514 USP46P62068 366 aa8.65□□□□□ -1.02
LINC01828-201ENST00000445514 KCNA1Q09470 495 aa8.65□□□□□ -1.02
LINC01828-201ENST00000445514 LOC100996750A0A140TA64 210 aa8.64□□□□□ -1.03
LINC01828-201ENST00000445514 H3BM21 787 aa8.64□□□□□ -1.03
LINC01828-201ENST00000445514 CAPN5O15484 640 aaPredicted RBP8.64□□□□□ -1.03
LINC01828-201ENST00000445514 NPAS3Q8IXF0 933 aa8.64□□□□□ -1.03
LINC01828-201ENST00000445514 EHBP1Q8NDI1 1231 aa8.64□□□□□ -1.03
LINC01828-201ENST00000445514 IRF7Q92985 503 aa8.64□□□□□ -1.03
LINC01828-201ENST00000445514 KRTAP4-6Q9BYQ5 205 aa8.64□□□□□ -1.03
LINC01828-201ENST00000445514 ACIN1Q9UKV3 1341 aaKnown RBP8.63□□□□□ -1.03
LINC01828-201ENST00000445514 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
LINC01828-201ENST00000445514 MDM2Q00987 491 aaPredicted RBP8.63□□□□□ -1.03
LINC01828-201ENST00000445514 MAP2K5Q13163 448 aa8.62□□□□□ -1.03
LINC01828-201ENST00000445514 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
LINC01828-201ENST00000445514 POLR3GLQ9BT43 218 aa8.62□□□□□ -1.03
LINC01828-201ENST00000445514 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
LINC01828-201ENST00000445514 SH3BP2P78314 561 aa8.6□□□□□ -1.03
LINC01828-201ENST00000445514 AMHR2Q16671 573 aa8.6□□□□□ -1.03
LINC01828-201ENST00000445514 ZFP42Q96MM3 310 aa8.6□□□□□ -1.03
LINC01828-201ENST00000445514 MINK1Q8N4C8 1332 aaPredicted RBP8.59□□□□□ -1.03
LINC01828-201ENST00000445514 BRD1O95696 1058 aa8.59□□□□□ -1.03
LINC01828-201ENST00000445514 CCDC27Q2M243 656 aa8.59□□□□□ -1.03
LINC01828-201ENST00000445514 PARP9Q8IXQ6 854 aa8.59□□□□□ -1.03
LINC01828-201ENST00000445514 POM121Q96HA1 1249 aa8.59□□□□□ -1.03
LINC01828-201ENST00000445514 TLL2Q9Y6L7 1015 aa8.59□□□□□ -1.03
LINC01828-201ENST00000445514 IRF6O14896 467 aa8.58□□□□□ -1.04
LINC01828-201ENST00000445514 RETREG3Q86VR2 466 aa8.58□□□□□ -1.04
LINC01828-201ENST00000445514 CCDC125Q86Z20 511 aa8.58□□□□□ -1.04
LINC01828-201ENST00000445514 CANXP27824 592 aaKnown RBP8.56□□□□□ -1.04
LINC01828-201ENST00000445514 DHX37Q8IY37 1157 aaKnown RBP8.56□□□□□ -1.04
LINC01828-201ENST00000445514 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
LINC01828-201ENST00000445514 PPM1GO15355 546 aaPredicted RBP8.55□□□□□ -1.04
LINC01828-201ENST00000445514 CCNYL3P0C7X3 344 aa8.55□□□□□ -1.04
LINC01828-201ENST00000445514 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
LINC01828-201ENST00000445514 FAM217BQ9NTX9 383 aaPredicted RBP8.55□□□□□ -1.04
LINC01828-201ENST00000445514 SOBPA7XYQ1 873 aa8.54□□□□□ -1.04
LINC01828-201ENST00000445514 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
LINC01828-201ENST00000445514 UNC93B1Q9H1C4 597 aa8.54□□□□□ -1.04
LINC01828-201ENST00000445514 MS4A1P11836 297 aa8.53□□□□□ -1.04
LINC01828-201ENST00000445514 IGSF5Q9NSI5 407 aa8.53□□□□□ -1.04
LINC01828-201ENST00000445514 ZNF330Q9Y3S2 320 aaPredicted RBP8.53□□□□□ -1.04
LINC01828-201ENST00000445514 FDX1P10109 184 aa8.52□□□□□ -1.05
LINC01828-201ENST00000445514 NNTQ13423 1086 aa8.52□□□□□ -1.05
LINC01828-201ENST00000445514 MRPL14Q6P1L8 145 aaKnown RBP8.52□□□□□ -1.05
LINC01828-201ENST00000445514 BAP1Q92560 729 aa8.52□□□□□ -1.05
LINC01828-201ENST00000445514 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
LINC01828-201ENST00000445514 GPCPD1Q9NPB8 672 aa8.52□□□□□ -1.05
LINC01828-201ENST00000445514 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
LINC01828-201ENST00000445514 TIMP2P16035 220 aa8.51□□□□□ -1.05
LINC01828-201ENST00000445514 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
LINC01828-201ENST00000445514 COG6Q9Y2V7 657 aa8.51□□□□□ -1.05
LINC01828-201ENST00000445514 UNCXA6NJT0 531 aa8.5□□□□□ -1.05
LINC01828-201ENST00000445514 VSIG8P0DPA2 414 aa8.5□□□□□ -1.05
LINC01828-201ENST00000445514 PTPRNQ16849 979 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms