RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 AKAP12Q02952 1782 aa30.96■■■□□ 2.55
TRAF4-205ENST00000444415 ST20-MTHFSA0A0A6YYL1 179 aa30.95■■■□□ 2.55
TRAF4-205ENST00000444415 PLEKHG5O94827 1062 aa30.95■■■□□ 2.55
TRAF4-205ENST00000444415 BCL9LQ86UU0 1499 aa30.95■■■□□ 2.54
TRAF4-205ENST00000444415 PHRF1Q9P1Y6 1649 aaKnown RBP30.95■■■□□ 2.54
TRAF4-205ENST00000444415 PAK3O75914 559 aaPredicted RBP30.94■■■□□ 2.54
TRAF4-205ENST00000444415 SLIT2O94813 1529 aa30.93■■■□□ 2.54
TRAF4-205ENST00000444415 USP47Q96K76 1375 aa30.93■■■□□ 2.54
TRAF4-205ENST00000444415 USP6P35125 1406 aa30.93■■■□□ 2.54
TRAF4-205ENST00000444415 PLCH1Q4KWH8 1693 aa30.93■■■□□ 2.54
TRAF4-205ENST00000444415 SSH2Q76I76 1423 aa30.92■■■□□ 2.54
TRAF4-205ENST00000444415 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.92■■■□□ 2.54
TRAF4-205ENST00000444415 ATAD2Q6PL18 1390 aa30.92■■■□□ 2.54
TRAF4-205ENST00000444415 NRKQ7Z2Y5 1582 aa30.91■■■□□ 2.54
TRAF4-205ENST00000444415 CD163L1Q9NR16 1453 aa30.89■■■□□ 2.54
TRAF4-205ENST00000444415 USP21Q9UK80 565 aa30.89■■■□□ 2.53
TRAF4-205ENST00000444415 CPSF1Q10570 1443 aaKnown RBP30.88■■■□□ 2.53
TRAF4-205ENST00000444415 MON2Q7Z3U7 1717 aa30.88■■■□□ 2.53
TRAF4-205ENST00000444415 ATRNO75882 1429 aa30.87■■■□□ 2.53
TRAF4-205ENST00000444415 PIK3C2AO00443 1686 aa30.87■■■□□ 2.53
TRAF4-205ENST00000444415 QTRT2Q9H974 415 aaKnown RBP30.87■■■□□ 2.53
TRAF4-205ENST00000444415 NWD2Q9ULI1 1742 aa30.86■■■□□ 2.53
TRAF4-205ENST00000444415 NUTM2GQ5VZR2 741 aa30.85■■■□□ 2.53
TRAF4-205ENST00000444415 BRD4O60885 1362 aaPredicted RBP30.84■■■□□ 2.53
TRAF4-205ENST00000444415 NRAPQ86VF7 1730 aa30.83■■■□□ 2.53
TRAF4-205ENST00000444415 HAP1P54257 671 aaPredicted RBP30.83■■■□□ 2.53
TRAF4-205ENST00000444415 RXRBP28702 533 aa30.82■■■□□ 2.53
TRAF4-205ENST00000444415 CDK12Q9NYV4 1490 aaPredicted RBP30.82■■■□□ 2.52
TRAF4-205ENST00000444415 FAM83GA6ND36 823 aa30.82■■■□□ 2.52
TRAF4-205ENST00000444415 COL14A1Q05707 1796 aaKnown RBP30.81■■■□□ 2.52
TRAF4-205ENST00000444415 USP19O94966 1318 aa30.81■■■□□ 2.52
TRAF4-205ENST00000444415 ABTB2Q8N961 1025 aa30.8■■■□□ 2.52
TRAF4-205ENST00000444415 RGS12O14924 1447 aa30.8■■■□□ 2.52
TRAF4-205ENST00000444415 PUS7Q96PZ0 661 aaKnown RBP30.79■■■□□ 2.52
TRAF4-205ENST00000444415 TRPC5Q9UL62 973 aaPredicted RBP30.79■■■□□ 2.52
TRAF4-205ENST00000444415 GLI3P10071 1580 aa30.78■■■□□ 2.52
TRAF4-205ENST00000444415 RBM6P78332 1123 aaKnown RBP30.78■■■□□ 2.52
TRAF4-205ENST00000444415 SLC12A5Q9H2X9 1139 aa30.77■■■□□ 2.52
TRAF4-205ENST00000444415 UNC5CLQ8IV45 518 aa30.76■■■□□ 2.52
TRAF4-205ENST00000444415 SLIT3O75094 1523 aa30.76■■■□□ 2.51
TRAF4-205ENST00000444415 TTC21BQ7Z4L5 1316 aa30.75■■■□□ 2.51
TRAF4-205ENST00000444415 KTN1Q86UP2 1357 aaKnown RBP30.75■■■□□ 2.51
TRAF4-205ENST00000444415 KIAA0232Q92628 1395 aa30.75■■■□□ 2.51
TRAF4-205ENST00000444415 ZNF692Q9BU19 519 aaPredicted RBP30.75■■■□□ 2.51
TRAF4-205ENST00000444415 EP400Q96L91 3159 aa30.73■■■□□ 2.51
TRAF4-205ENST00000444415 A0A1W2PP64 1363 aa30.72■■■□□ 2.51
TRAF4-205ENST00000444415 TMC1Q8TDI8 760 aa30.71■■■□□ 2.51
TRAF4-205ENST00000444415 USP54Q70EL1 1684 aa30.71■■■□□ 2.51
TRAF4-205ENST00000444415 LMO7Q8WWI1 1683 aa30.71■■■□□ 2.51
TRAF4-205ENST00000444415 NLRP13Q86W25 1043 aa30.7■■■□□ 2.51
TRAF4-205ENST00000444415 MYOM1P52179 1685 aa30.69■■■□□ 2.5
TRAF4-205ENST00000444415 ZC3H6P61129 1189 aaKnown RBP30.69■■■□□ 2.5
TRAF4-205ENST00000444415 GJD4Q96KN9 370 aaPredicted RBP30.69■■■□□ 2.5
TRAF4-205ENST00000444415 BTG4Q9NY30 223 aa30.69■■■□□ 2.5
TRAF4-205ENST00000444415 NLRP6P59044 892 aa30.68■■■□□ 2.5
TRAF4-205ENST00000444415 TMF1P82094 1093 aa30.68■■■□□ 2.5
TRAF4-205ENST00000444415 PRDM11Q9NQV5 511 aa30.68■■■□□ 2.5
TRAF4-205ENST00000444415 TTC21AQ8NDW8 1320 aa30.68■■■□□ 2.5
TRAF4-205ENST00000444415 CPDO75976 1380 aa30.68■■■□□ 2.5
TRAF4-205ENST00000444415 SLC24A1O60721 1099 aa30.67■■■□□ 2.5
TRAF4-205ENST00000444415 GCP02774 474 aa30.67■■■□□ 2.5
TRAF4-205ENST00000444415 CHRNA2Q15822 529 aa30.67■■■□□ 2.5
TRAF4-205ENST00000444415 NINLQ9Y2I6 1382 aa30.67■■■□□ 2.5
TRAF4-205ENST00000444415 VPS72Q15906 364 aa30.66■■■□□ 2.5
TRAF4-205ENST00000444415 ZRANB1Q9UGI0 708 aa30.64■■■□□ 2.5
TRAF4-205ENST00000444415 EDC4Q6P2E9 1401 aaKnown RBP30.64■■■□□ 2.5
TRAF4-205ENST00000444415 CAMTA1Q9Y6Y1 1673 aa30.64■■■□□ 2.5
TRAF4-205ENST00000444415 COL18A1P39060 1754 aa30.63■■■□□ 2.49
TRAF4-205ENST00000444415 NFAT5O94916 1531 aa30.62■■■□□ 2.49
TRAF4-205ENST00000444415 HDGFL2Q7Z4V5 671 aaPredicted RBP30.61■■■□□ 2.49
TRAF4-205ENST00000444415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.61■■■□□ 2.49
TRAF4-205ENST00000444415 USP31Q70CQ4 1352 aa30.6■■■□□ 2.49
TRAF4-205ENST00000444415 HSPA5P11021 654 aaKnown RBP30.6■■■□□ 2.49
TRAF4-205ENST00000444415 NME9Q86XW9 330 aa30.6■■■□□ 2.49
TRAF4-205ENST00000444415 TERF2IPQ9NYB0 399 aa30.6■■■□□ 2.49
TRAF4-205ENST00000444415 BRWD3Q6RI45 1802 aa30.6■■■□□ 2.49
TRAF4-205ENST00000444415 ANKRD36BQ8N2N9 1353 aa30.59■■■□□ 2.49
TRAF4-205ENST00000444415 OVOS2A0A0J9YW53 1432 aa30.57■■■□□ 2.48
TRAF4-205ENST00000444415 EIF4G2P78344 907 aaKnown RBP eCLIP30.57■■■□□ 2.48
TRAF4-205ENST00000444415 OVOS2Q6IE36 1432 aa30.57■■■□□ 2.48
TRAF4-205ENST00000444415 RGPD5Q99666 1765 aa30.54■■■□□ 2.48
TRAF4-205ENST00000444415 SPATA31A5Q5VU36 1347 aa30.53■■■□□ 2.48
TRAF4-205ENST00000444415 SPATA31A7Q8IWB4 1347 aa30.53■■■□□ 2.48
TRAF4-205ENST00000444415 COL5A2P05997 1499 aaPredicted RBP30.53■■■□□ 2.48
TRAF4-205ENST00000444415 ONECUT3O60422 494 aaPredicted RBP30.52■■■□□ 2.48
TRAF4-205ENST00000444415 AATKQ6ZMQ8 1374 aa30.51■■■□□ 2.48
TRAF4-205ENST00000444415 CDCA8Q53HL2 280 aa30.51■■■□□ 2.48
TRAF4-205ENST00000444415 CCDC9Q9Y3X0 531 aaKnown RBP30.51■■■□□ 2.48
TRAF4-205ENST00000444415 ARHGEF25Q86VW2 580 aa30.5■■■□□ 2.47
TRAF4-205ENST00000444415 THSD7AQ9UPZ6 1657 aa30.5■■■□□ 2.47
TRAF4-205ENST00000444415 SOX12O15370 315 aa30.5■■■□□ 2.47
TRAF4-205ENST00000444415 STRN4Q9NRL3 753 aa30.5■■■□□ 2.47
TRAF4-205ENST00000444415 LTN1O94822 1766 aa30.49■■■□□ 2.47
TRAF4-205ENST00000444415 UPF1Q92900 1129 aaKnown RBP eCLIP30.49■■■□□ 2.479e-9■■■■■ 36.6
TRAF4-205ENST00000444415 KCNH5Q8NCM2 988 aa30.48■■■□□ 2.47
TRAF4-205ENST00000444415 AXIN2Q9Y2T1 843 aa30.48■■■□□ 2.47
TRAF4-205ENST00000444415 SPATA31A1Q5TZJ5 1347 aa30.48■■■□□ 2.47
TRAF4-205ENST00000444415 SEPT12Q8IYM1 358 aa30.46■■■□□ 2.47
TRAF4-205ENST00000444415 ZBTB7CA1YPR0 619 aa30.45■■■□□ 2.47
TRAF4-205ENST00000444415 C11orf95C9JLR9 678 aaPredicted RBP30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms