RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 CRYBG1Q9Y4K1 1723 aa29.15■■■□□ 2.26
UBE2D4-205ENST00000443780 PAK3O75914 559 aaPredicted RBP29.15■■■□□ 2.26
UBE2D4-205ENST00000443780 CABP2Q9NPB3 220 aa29.15■■■□□ 2.26
UBE2D4-205ENST00000443780 ACEP12821 1306 aa29.15■■■□□ 2.26
UBE2D4-205ENST00000443780 NWD2Q9ULI1 1742 aa29.14■■■□□ 2.25
UBE2D4-205ENST00000443780 UNC5CLQ8IV45 518 aa29.12■■■□□ 2.25
UBE2D4-205ENST00000443780 PPIP5K1Q6PFW1 1433 aa29.11■■■□□ 2.25
UBE2D4-205ENST00000443780 EVC2Q86UK5 1308 aa29.09■■■□□ 2.25
UBE2D4-205ENST00000443780 RALGAPBQ86X10 1494 aa29.09■■■□□ 2.25
UBE2D4-205ENST00000443780 GJD4Q96KN9 370 aaPredicted RBP29.08■■■□□ 2.25
UBE2D4-205ENST00000443780 FAM83GA6ND36 823 aa29.06■■■□□ 2.24
UBE2D4-205ENST00000443780 CARD11Q9BXL7 1154 aa29.06■■■□□ 2.24
UBE2D4-205ENST00000443780 UPF1Q92900 1129 aaKnown RBP eCLIP29.05■■■□□ 2.24
UBE2D4-205ENST00000443780 COL14A1Q05707 1796 aaKnown RBP29.05■■■□□ 2.24
UBE2D4-205ENST00000443780 PHRF1Q9P1Y6 1649 aaKnown RBP29.05■■■□□ 2.24
UBE2D4-205ENST00000443780 GLI3P10071 1580 aa29.04■■■□□ 2.24
UBE2D4-205ENST00000443780 CABP1Q9NZU7 370 aa29.03■■■□□ 2.24
UBE2D4-205ENST00000443780 NRAPQ86VF7 1730 aa29.03■■■□□ 2.24
UBE2D4-205ENST00000443780 VPS72Q15906 364 aa29■■■□□ 2.23
UBE2D4-205ENST00000443780 NUTM2GQ5VZR2 741 aa29■■■□□ 2.23
UBE2D4-205ENST00000443780 SBNO2Q9Y2G9 1366 aa29■■■□□ 2.23
UBE2D4-205ENST00000443780 ABTB2Q8N961 1025 aa28.99■■■□□ 2.23
UBE2D4-205ENST00000443780 BRD4O60885 1362 aaPredicted RBP28.98■■■□□ 2.23
UBE2D4-205ENST00000443780 BTG4Q9NY30 223 aa28.97■■■□□ 2.23
UBE2D4-205ENST00000443780 AKAP12Q02952 1782 aa28.97■■■□□ 2.23
UBE2D4-205ENST00000443780 BRWD3Q6RI45 1802 aa28.96■■■□□ 2.23
UBE2D4-205ENST00000443780 USP6P35125 1406 aa28.95■■■□□ 2.23
UBE2D4-205ENST00000443780 PRDM11Q9NQV5 511 aa28.95■■■□□ 2.22
UBE2D4-205ENST00000443780 ATAD2Q6PL18 1390 aa28.93■■■□□ 2.22
UBE2D4-205ENST00000443780 KIAA0232Q92628 1395 aa28.93■■■□□ 2.22
UBE2D4-205ENST00000443780 PCGF6Q9BYE7 350 aa28.93■■■□□ 2.22
UBE2D4-205ENST00000443780 CCDC9Q9Y3X0 531 aaKnown RBP28.93■■■□□ 2.22
UBE2D4-205ENST00000443780 NRKQ7Z2Y5 1582 aa28.92■■■□□ 2.22
UBE2D4-205ENST00000443780 NLRP13Q86W25 1043 aa28.91■■■□□ 2.22
UBE2D4-205ENST00000443780 USP19O94966 1318 aa28.91■■■□□ 2.22
UBE2D4-205ENST00000443780 ZC3H6P61129 1189 aaKnown RBP28.9■■■□□ 2.22
UBE2D4-205ENST00000443780 SSH2Q76I76 1423 aa28.9■■■□□ 2.22
UBE2D4-205ENST00000443780 CHRNA2Q15822 529 aa28.88■■■□□ 2.21
UBE2D4-205ENST00000443780 ZNF692Q9BU19 519 aaPredicted RBP28.88■■■□□ 2.21
UBE2D4-205ENST00000443780 PIK3C2AO00443 1686 aa28.87■■■□□ 2.21
UBE2D4-205ENST00000443780 ONECUT3O60422 494 aaPredicted RBP28.87■■■□□ 2.21
UBE2D4-205ENST00000443780 CLSPNQ9HAW4 1339 aa28.87■■■□□ 2.21
UBE2D4-205ENST00000443780 MON2Q7Z3U7 1717 aa28.86■■■□□ 2.21
UBE2D4-205ENST00000443780 CPSF1Q10570 1443 aaKnown RBP28.86■■■□□ 2.21
UBE2D4-205ENST00000443780 SEPT12Q8IYM1 358 aa28.85■■■□□ 2.21
UBE2D4-205ENST00000443780 GCP02774 474 aa28.84■■■□□ 2.21
UBE2D4-205ENST00000443780 NLRP6P59044 892 aa28.84■■■□□ 2.21
UBE2D4-205ENST00000443780 CPDO75976 1380 aa28.84■■■□□ 2.21
UBE2D4-205ENST00000443780 ST20-MTHFSA0A0A6YYL1 179 aa28.82■■■□□ 2.2
UBE2D4-205ENST00000443780 TIMELESSQ9UNS1 1208 aa28.82■■■□□ 2.2
UBE2D4-205ENST00000443780 SPATA31A5Q5VU36 1347 aa28.82■■■□□ 2.2
UBE2D4-205ENST00000443780 TTC21BQ7Z4L5 1316 aa28.82■■■□□ 2.2
UBE2D4-205ENST00000443780 SPATA31A7Q8IWB4 1347 aa28.82■■■□□ 2.2
UBE2D4-205ENST00000443780 LMO7Q8WWI1 1683 aa28.81■■■□□ 2.2
UBE2D4-205ENST00000443780 SLIT3O75094 1523 aa28.81■■■□□ 2.2
UBE2D4-205ENST00000443780 KTN1Q86UP2 1357 aaKnown RBP28.81■■■□□ 2.2
UBE2D4-205ENST00000443780 TESK2Q96S53 571 aa28.8■■■□□ 2.2
UBE2D4-205ENST00000443780 EP400Q96L91 3159 aa28.8■■■□□ 2.2
UBE2D4-205ENST00000443780 CAMTA1Q9Y6Y1 1673 aa28.8■■■□□ 2.2
UBE2D4-205ENST00000443780 FAM98CQ17RN3 349 aaKnown RBP28.79■■■□□ 2.2
UBE2D4-205ENST00000443780 PUS7Q96PZ0 661 aaKnown RBP28.79■■■□□ 2.2
UBE2D4-205ENST00000443780 TTC21AQ8NDW8 1320 aa28.78■■■□□ 2.2
UBE2D4-205ENST00000443780 STRN4Q9NRL3 753 aa28.78■■■□□ 2.2
UBE2D4-205ENST00000443780 CD163L1Q9NR16 1453 aa28.78■■■□□ 2.2
UBE2D4-205ENST00000443780 TMC1Q8TDI8 760 aa28.77■■■□□ 2.2
UBE2D4-205ENST00000443780 A0A0G2JS52 829 aa28.75■■■□□ 2.19
UBE2D4-205ENST00000443780 SLC24A1O60721 1099 aa28.75■■■□□ 2.19
UBE2D4-205ENST00000443780 MYT1Q01538 1121 aa28.75■■■□□ 2.19
UBE2D4-205ENST00000443780 SLC12A5Q9H2X9 1139 aa28.75■■■□□ 2.19
UBE2D4-205ENST00000443780 SPATA31A1Q5TZJ5 1347 aa28.74■■■□□ 2.19
UBE2D4-205ENST00000443780 THSD7AQ9UPZ6 1657 aa28.74■■■□□ 2.19
UBE2D4-205ENST00000443780 EVA1CP58658 441 aa28.74■■■□□ 2.19
UBE2D4-205ENST00000443780 KRT27Q7Z3Y8 459 aa28.74■■■□□ 2.19
UBE2D4-205ENST00000443780 USP47Q96K76 1375 aa28.74■■■□□ 2.19
UBE2D4-205ENST00000443780 CCDC125Q86Z20 511 aa28.73■■■□□ 2.19
UBE2D4-205ENST00000443780 COL18A1P39060 1754 aa28.73■■■□□ 2.19
UBE2D4-205ENST00000443780 HDGFL2Q7Z4V5 671 aaPredicted RBP28.71■■■□□ 2.19
UBE2D4-205ENST00000443780 USP54Q70EL1 1684 aa28.7■■■□□ 2.18
UBE2D4-205ENST00000443780 RGPD5Q99666 1765 aa28.7■■■□□ 2.18
UBE2D4-205ENST00000443780 ZBTB7CA1YPR0 619 aa28.69■■■□□ 2.18
UBE2D4-205ENST00000443780 LARP1Q6PKG0 1096 aaKnown RBP28.69■■■□□ 2.18
UBE2D4-205ENST00000443780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.69■■■□□ 2.18
UBE2D4-205ENST00000443780 TERF2IPQ9NYB0 399 aa28.69■■■□□ 2.18
UBE2D4-205ENST00000443780 AATKQ6ZMQ8 1374 aa28.69■■■□□ 2.18
UBE2D4-205ENST00000443780 COL5A2P05997 1499 aaPredicted RBP28.68■■■□□ 2.18
UBE2D4-205ENST00000443780 KCNH5Q8NCM2 988 aa28.68■■■□□ 2.18
UBE2D4-205ENST00000443780 A0A1W2PP64 1363 aa28.67■■■□□ 2.18
UBE2D4-205ENST00000443780 CCER1Q8TC90 406 aaPredicted RBP28.67■■■□□ 2.18
UBE2D4-205ENST00000443780 USP35Q9P2H5 1018 aa28.66■■■□□ 2.18
UBE2D4-205ENST00000443780 BLMP54132 1417 aaPredicted RBP28.66■■■□□ 2.18
UBE2D4-205ENST00000443780 EDC4Q6P2E9 1401 aaKnown RBP28.66■■■□□ 2.18
UBE2D4-205ENST00000443780 USP31Q70CQ4 1352 aa28.65■■■□□ 2.18
UBE2D4-205ENST00000443780 NINLQ9Y2I6 1382 aa28.65■■■□□ 2.18
UBE2D4-205ENST00000443780 ZRANB1Q9UGI0 708 aa28.65■■■□□ 2.18
UBE2D4-205ENST00000443780 NFAT5O94916 1531 aa28.64■■■□□ 2.18
UBE2D4-205ENST00000443780 ARHGEF25Q86VW2 580 aa28.64■■■□□ 2.18
UBE2D4-205ENST00000443780 NME9Q86XW9 330 aa28.64■■■□□ 2.18
UBE2D4-205ENST00000443780 SOX12O15370 315 aa28.63■■■□□ 2.17
UBE2D4-205ENST00000443780 TMF1P82094 1093 aa28.63■■■□□ 2.17
UBE2D4-205ENST00000443780 BARGINQ6ZT62 677 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms