RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CLP1Q92989 425 aaKnown RBP8.26□□□□□ -1.09
TM9SF3-202ENST00000443638 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
TM9SF3-202ENST00000443638 KHSRPQ92945 711 aaKnown RBP eCLIP8.25□□□□□ -1.096e-7■■■□□ 16.4
TM9SF3-202ENST00000443638 USP17L5A8MUK1 530 aa8.24□□□□□ -1.09
TM9SF3-202ENST00000443638 TCF3P15923 654 aa8.24□□□□□ -1.09
TM9SF3-202ENST00000443638 VAMP1P23763 118 aa8.24□□□□□ -1.09
TM9SF3-202ENST00000443638 CRTC2Q53ET0 693 aaPredicted RBP8.24□□□□□ -1.09
TM9SF3-202ENST00000443638 NPAS4Q8IUM7 802 aa8.24□□□□□ -1.09
TM9SF3-202ENST00000443638 FAM177A1Q8N128 213 aaPredicted RBP8.24□□□□□ -1.09
TM9SF3-202ENST00000443638 BCL2L13Q9BXK5 485 aa8.24□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L10C9JJH3 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L21D6R901 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 C6orf229H3BNL8 230 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 SMAPO00193 183 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 FBXO45P0C2W1 286 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 PTK7Q13308 1070 aa8.23□□□□□ -1.09
TM9SF3-202ENST00000443638 CDK11BP21127 795 aaKnown RBP8.22□□□□□ -1.09
TM9SF3-202ENST00000443638 SERPINB4P48594 390 aa8.22□□□□□ -1.09
TM9SF3-202ENST00000443638 FAM174AQ8TBP5 190 aa8.22□□□□□ -1.09
TM9SF3-202ENST00000443638 C8orf37Q96NL8 207 aa8.22□□□□□ -1.09
TM9SF3-202ENST00000443638 CDK11AQ9UQ88 783 aaPredicted RBP8.22□□□□□ -1.09
TM9SF3-202ENST00000443638 PTPREP23469 700 aa8.21□□□□□ -1.1
TM9SF3-202ENST00000443638 MARSP56192 900 aaKnown RBP8.21□□□□□ -1.1
TM9SF3-202ENST00000443638 PPP4R3BQ5MIZ7 849 aa8.21□□□□□ -1.1
TM9SF3-202ENST00000443638 DESI1Q6ICB0 168 aa8.21□□□□□ -1.1
TM9SF3-202ENST00000443638 CCDC125Q86Z20 511 aa8.21□□□□□ -1.1
TM9SF3-202ENST00000443638 GIPC2Q8TF65 315 aa8.21□□□□□ -1.1
TM9SF3-202ENST00000443638 SKIP12755 728 aa8.2□□□□□ -1.1
TM9SF3-202ENST00000443638 ANKRD13DQ6ZTN6 518 aa8.2□□□□□ -1.1
TM9SF3-202ENST00000443638 C1orf216Q8TAB5 229 aa8.2□□□□□ -1.1
TM9SF3-202ENST00000443638 SYMPKQ92797 1274 aaKnown RBP8.2□□□□□ -1.1
TM9SF3-202ENST00000443638 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
TM9SF3-202ENST00000443638 PBX2P40425 430 aa8.19□□□□□ -1.1
TM9SF3-202ENST00000443638 LSM11P83369 360 aaKnown RBP eCLIP8.19□□□□□ -1.1
TM9SF3-202ENST00000443638 FUT2Q10981 343 aa8.19□□□□□ -1.1
TM9SF3-202ENST00000443638 CDCA7Q9BWT1 371 aaPredicted RBP8.19□□□□□ -1.1
TM9SF3-202ENST00000443638 LHX6Q9UPM6 363 aa8.19□□□□□ -1.1
TM9SF3-202ENST00000443638 PSDA5PKW4 1024 aaPredicted RBP8.18□□□□□ -1.1
TM9SF3-202ENST00000443638 ANKRD33BA6NCL7 494 aa8.18□□□□□ -1.1
TM9SF3-202ENST00000443638 ATP2B4P23634 1241 aa8.18□□□□□ -1.1
TM9SF3-202ENST00000443638 PROX2Q3B8N5 592 aa8.18□□□□□ -1.1
TM9SF3-202ENST00000443638 GRIPAP1Q4V328 841 aa8.18□□□□□ -1.1
TM9SF3-202ENST00000443638 SWT1Q5T5J6 900 aaKnown RBP8.18□□□□□ -1.1
TM9SF3-202ENST00000443638 FBXO33Q7Z6M2 555 aa8.18□□□□□ -1.1
TM9SF3-202ENST00000443638 DEPDC4Q8N2C3 294 aa8.18□□□□□ -1.1
TM9SF3-202ENST00000443638 MKRN1Q9UHC7 482 aaKnown RBP8.18□□□□□ -1.1
TM9SF3-202ENST00000443638 LYPD8Q6UX82 237 aa8.17□□□□□ -1.1
TM9SF3-202ENST00000443638 RETREG3Q86VR2 466 aa8.17□□□□□ -1.1
TM9SF3-202ENST00000443638 FAM200AQ8TCP9 573 aa8.17□□□□□ -1.1
TM9SF3-202ENST00000443638 ATP5J2-PTCD1G3V325 749 aa8.16□□□□□ -1.1
TM9SF3-202ENST00000443638 SWI5Q1ZZU3 235 aa8.16□□□□□ -1.1
TM9SF3-202ENST00000443638 ANKMY2Q8IV38 441 aa8.16□□□□□ -1.1
TM9SF3-202ENST00000443638 PHTF2Q8N3S3 785 aa8.16□□□□□ -1.1
TM9SF3-202ENST00000443638 SREK1Q8WXA9 508 aaKnown RBP8.16□□□□□ -1.1
TM9SF3-202ENST00000443638 CHIC2Q9UKJ5 165 aa8.16□□□□□ -1.1
TM9SF3-202ENST00000443638 ZC3H4Q9UPT8 1303 aaKnown RBP8.15□□□□□ -1.1
TM9SF3-202ENST00000443638 RASA1P20936 1047 aa8.15□□□□□ -1.1
TM9SF3-202ENST00000443638 ATP6V1AP38606 617 aa8.15□□□□□ -1.1
TM9SF3-202ENST00000443638 LARP1Q6PKG0 1096 aaKnown RBP8.15□□□□□ -1.1
TM9SF3-202ENST00000443638 DRC1Q96MC2 740 aa8.15□□□□□ -1.1
TM9SF3-202ENST00000443638 EGFL7Q9UHF1 273 aa8.15□□□□□ -1.1
TM9SF3-202ENST00000443638 FKBPLQ9UIM3 349 aa8.15□□□□□ -1.1
TM9SF3-202ENST00000443638 RECKO95980 971 aa8.14□□□□□ -1.11
TM9SF3-202ENST00000443638 SCNN1AP37088 669 aa8.14□□□□□ -1.11
TM9SF3-202ENST00000443638 NCOA4Q13772 614 aa8.14□□□□□ -1.11
TM9SF3-202ENST00000443638 ZNF326Q5BKZ1 582 aaKnown RBP8.14□□□□□ -1.11
TM9SF3-202ENST00000443638 KIAA1468Q9P260 1216 aa8.14□□□□□ -1.11
TM9SF3-202ENST00000443638 LZTS3O60299 673 aaPredicted RBP8.13□□□□□ -1.11
TM9SF3-202ENST00000443638 DKK1O94907 266 aa8.13□□□□□ -1.11
TM9SF3-202ENST00000443638 TAS1R3Q7RTX0 852 aa8.13□□□□□ -1.11
TM9SF3-202ENST00000443638 F12P00748 615 aaPredicted RBP8.12□□□□□ -1.11
TM9SF3-202ENST00000443638 CFHP08603 1231 aa8.12□□□□□ -1.11
TM9SF3-202ENST00000443638 ZC3H6P61129 1189 aaKnown RBP8.12□□□□□ -1.11
TM9SF3-202ENST00000443638 DPYDQ12882 1025 aa8.12□□□□□ -1.11
TM9SF3-202ENST00000443638 RNF135Q8IUD6 432 aa8.12□□□□□ -1.11
TM9SF3-202ENST00000443638 CEP126Q9P2H0 1117 aa8.12□□□□□ -1.11
TM9SF3-202ENST00000443638 BIN2Q9UBW5 565 aaPredicted RBP8.12□□□□□ -1.11
TM9SF3-202ENST00000443638 OCLNQ16625 522 aa8.11□□□□□ -1.11
TM9SF3-202ENST00000443638 CLDN10P78369 228 aa8.1□□□□□ -1.11
TM9SF3-202ENST00000443638 TAGLNQ01995 201 aaKnown RBP8.1□□□□□ -1.11
TM9SF3-202ENST00000443638 ECM1Q16610 540 aa8.1□□□□□ -1.11
TM9SF3-202ENST00000443638 MORN1Q5T089 497 aa8.1□□□□□ -1.11
TM9SF3-202ENST00000443638 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
TM9SF3-202ENST00000443638 ZBED2Q9BTP6 218 aa8.1□□□□□ -1.11
TM9SF3-202ENST00000443638 ICMTO60725 284 aa8.09□□□□□ -1.11
TM9SF3-202ENST00000443638 CANXP27824 592 aaKnown RBP8.09□□□□□ -1.11
TM9SF3-202ENST00000443638 COL19A1Q14993 1142 aa8.09□□□□□ -1.11
TM9SF3-202ENST00000443638 POTEEQ6S8J3 1075 aa8.09□□□□□ -1.11
TM9SF3-202ENST00000443638 OGFOD1Q8N543 542 aa8.09□□□□□ -1.11
TM9SF3-202ENST00000443638 TRAF7Q6Q0C0 670 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms