RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 USP6P35125 1406 aa15.13■□□□□ 0.01
HDAC6-211ENST00000443563 TMC1Q8TDI8 760 aa15.13■□□□□ 0.01
HDAC6-211ENST00000443563 MON2Q7Z3U7 1717 aa15.12■□□□□ 0.01
HDAC6-211ENST00000443563 HSPA5P11021 654 aaKnown RBP15.12■□□□□ 0.01
HDAC6-211ENST00000443563 HAP1P54257 671 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-211ENST00000443563 HDGFL2Q7Z4V5 671 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-211ENST00000443563 TERF2IPQ9NYB0 399 aa15.12■□□□□ 0.01
HDAC6-211ENST00000443563 ABCA3Q99758 1704 aa15.12■□□□□ 0.01
HDAC6-211ENST00000443563 CPSF1Q10570 1443 aaKnown RBP15.11■□□□□ 0.01
HDAC6-211ENST00000443563 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
HDAC6-211ENST00000443563 ADAMTS2O95450 1211 aa15.09■□□□□ 0.01
HDAC6-211ENST00000443563 ABTB2Q8N961 1025 aa15.09■□□□□ 0.01
HDAC6-211ENST00000443563 NRKQ7Z2Y5 1582 aa15.09■□□□□ 0.01
HDAC6-211ENST00000443563 TTC21AQ8NDW8 1320 aa15.09■□□□□ 0.01
HDAC6-211ENST00000443563 CRYBG1Q9Y4K1 1723 aa15.09■□□□□ 0.01
HDAC6-211ENST00000443563 SLC12A5Q9H2X9 1139 aa15.08■□□□□ 0
HDAC6-211ENST00000443563 CD163L1Q9NR16 1453 aa15.08■□□□□ 0
HDAC6-211ENST00000443563 PHRF1Q9P1Y6 1649 aaKnown RBP15.07■□□□□ 0
HDAC6-211ENST00000443563 ZNF772Q68DY9 489 aaPredicted RBP15.07■□□□□ 0
HDAC6-211ENST00000443563 NLRP13Q86W25 1043 aa15.07■□□□□ 0
HDAC6-211ENST00000443563 C8orf37Q96NL8 207 aa15.07■□□□□ 0
HDAC6-211ENST00000443563 SSH2Q76I76 1423 aa15.07■□□□□ 0
HDAC6-211ENST00000443563 NGLY1Q96IV0 654 aa15.06■□□□□ 0
HDAC6-211ENST00000443563 TTC21BQ7Z4L5 1316 aa15.06■□□□□ 0
HDAC6-211ENST00000443563 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
HDAC6-211ENST00000443563 PIK3C2AO00443 1686 aa15.06■□□□□ 0
HDAC6-211ENST00000443563 CABLES1Q8TDN4 633 aa15.05■□□□□ -0
HDAC6-211ENST00000443563 AFF2P51816 1311 aa15.05■□□□□ -0
HDAC6-211ENST00000443563 A0A1W2PP64 1363 aa15.05■□□□□ -0
HDAC6-211ENST00000443563 ANKRD36BQ8N2N9 1353 aa15.05■□□□□ -0
HDAC6-211ENST00000443563 MYOM1P52179 1685 aa15.05■□□□□ -0
HDAC6-211ENST00000443563 PLEKHG5O94827 1062 aa15.04■□□□□ -0
HDAC6-211ENST00000443563 NWD2Q9ULI1 1742 aa15.03■□□□□ -0
HDAC6-211ENST00000443563 NLRP6P59044 892 aa15.03■□□□□ -0
HDAC6-211ENST00000443563 NUTM2GQ5VZR2 741 aa15.03■□□□□ -0
HDAC6-211ENST00000443563 COL14A1Q05707 1796 aaKnown RBP15.03■□□□□ -0
HDAC6-211ENST00000443563 USP54Q70EL1 1684 aa15.03■□□□□ -0
HDAC6-211ENST00000443563 USP19O94966 1318 aa15.02■□□□□ -0
HDAC6-211ENST00000443563 ZEB1P37275 1124 aaPredicted RBP15.02■□□□□ -0
HDAC6-211ENST00000443563 FNBP4Q8N3X1 1017 aaPredicted RBP15.02■□□□□ -0
HDAC6-211ENST00000443563 RGS17Q9UGC6 210 aaPredicted RBP15.02■□□□□ -0
HDAC6-211ENST00000443563 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.02□□□□□ -0.01
HDAC6-211ENST00000443563 PLCH1Q4KWH8 1693 aa15.02□□□□□ -0.01
HDAC6-211ENST00000443563 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
HDAC6-211ENST00000443563 SLIT3O75094 1523 aa15.01□□□□□ -0.01
HDAC6-211ENST00000443563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.01
HDAC6-211ENST00000443563 KCNH5Q8NCM2 988 aa15□□□□□ -0.01
HDAC6-211ENST00000443563 USP21Q9UK80 565 aa15□□□□□ -0.01
HDAC6-211ENST00000443563 USP31Q70CQ4 1352 aa14.99□□□□□ -0.01
HDAC6-211ENST00000443563 SLIT2O94813 1529 aa14.99□□□□□ -0.01
HDAC6-211ENST00000443563 GCP02774 474 aa14.99□□□□□ -0.01
HDAC6-211ENST00000443563 PRDM11Q9NQV5 511 aa14.98□□□□□ -0.01
HDAC6-211ENST00000443563 TRPC5Q9UL62 973 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-211ENST00000443563 KIF20BQ96Q89 1820 aa14.98□□□□□ -0.01
HDAC6-211ENST00000443563 CPDO75976 1380 aa14.98□□□□□ -0.01
HDAC6-211ENST00000443563 FAM83GA6ND36 823 aa14.97□□□□□ -0.01
HDAC6-211ENST00000443563 ZC3H6P61129 1189 aaKnown RBP14.97□□□□□ -0.01
HDAC6-211ENST00000443563 POTEAQ6S8J7 498 aa14.97□□□□□ -0.01
HDAC6-211ENST00000443563 QTRT2Q9H974 415 aaKnown RBP14.97□□□□□ -0.01
HDAC6-211ENST00000443563 KIAA0232Q92628 1395 aa14.97□□□□□ -0.01
HDAC6-211ENST00000443563 BCL9LQ86UU0 1499 aa14.96□□□□□ -0.01
HDAC6-211ENST00000443563 NME9Q86XW9 330 aa14.96□□□□□ -0.01
HDAC6-211ENST00000443563 UNC5CLQ8IV45 518 aa14.96□□□□□ -0.01
HDAC6-211ENST00000443563 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
HDAC6-211ENST00000443563 RXRBP28702 533 aa14.95□□□□□ -0.02
HDAC6-211ENST00000443563 COG3Q96JB2 828 aa14.95□□□□□ -0.02
HDAC6-211ENST00000443563 KIF7Q2M1P5 1343 aa14.94□□□□□ -0.02
HDAC6-211ENST00000443563 OVOS2A0A0J9YW53 1432 aa14.94□□□□□ -0.02
HDAC6-211ENST00000443563 ATRNO75882 1429 aa14.94□□□□□ -0.02
HDAC6-211ENST00000443563 OVOS2Q6IE36 1432 aa14.94□□□□□ -0.02
HDAC6-211ENST00000443563 NSD3Q9BZ95 1437 aa14.94□□□□□ -0.02
HDAC6-211ENST00000443563 C11orf95C9JLR9 678 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-211ENST00000443563 RBM6P78332 1123 aaKnown RBP14.94□□□□□ -0.02
HDAC6-211ENST00000443563 BTG4Q9NY30 223 aa14.94□□□□□ -0.02
HDAC6-211ENST00000443563 NFAT5O94916 1531 aa14.92□□□□□ -0.02
HDAC6-211ENST00000443563 CHRNA2Q15822 529 aa14.92□□□□□ -0.02
HDAC6-211ENST00000443563 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
HDAC6-211ENST00000443563 CDK12Q9NYV4 1490 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-211ENST00000443563 LMO7Q8WWI1 1683 aa14.92□□□□□ -0.02
HDAC6-211ENST00000443563 LTN1O94822 1766 aa14.92□□□□□ -0.02
HDAC6-211ENST00000443563 ABCC6O95255 1503 aa14.92□□□□□ -0.02
HDAC6-211ENST00000443563 CGNL1Q0VF96 1302 aa14.92□□□□□ -0.02
HDAC6-211ENST00000443563 AATKQ6ZMQ8 1374 aa14.91□□□□□ -0.02
HDAC6-211ENST00000443563 FYB1O15117 783 aa14.91□□□□□ -0.02
HDAC6-211ENST00000443563 VPS72Q15906 364 aa14.91□□□□□ -0.02
HDAC6-211ENST00000443563 ILDR2Q71H61 639 aa14.91□□□□□ -0.02
HDAC6-211ENST00000443563 CARD14Q9BXL6 1004 aa14.91□□□□□ -0.02
HDAC6-211ENST00000443563 PANK3Q9H999 370 aa14.91□□□□□ -0.02
HDAC6-211ENST00000443563 CCDC7Q96M83 1385 aa14.9□□□□□ -0.02
HDAC6-211ENST00000443563 ANKRD26Q9UPS8 1709 aa14.9□□□□□ -0.02
HDAC6-211ENST00000443563 ZBTB7CA1YPR0 619 aa14.9□□□□□ -0.02
HDAC6-211ENST00000443563 SOX12O15370 315 aa14.9□□□□□ -0.02
HDAC6-211ENST00000443563 EVA1CP58658 441 aa14.9□□□□□ -0.02
HDAC6-211ENST00000443563 ARHGEF25Q86VW2 580 aa14.9□□□□□ -0.02
HDAC6-211ENST00000443563 GJD4Q96KN9 370 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-211ENST00000443563 COL18A1P39060 1754 aa14.9□□□□□ -0.02
HDAC6-211ENST00000443563 GGNBP2Q9H3C7 697 aa14.89□□□□□ -0.03
HDAC6-211ENST00000443563 CCDC9Q9Y3X0 531 aaKnown RBP14.89□□□□□ -0.03
HDAC6-211ENST00000443563 CAMTA1Q9Y6Y1 1673 aa14.88□□□□□ -0.03
HDAC6-211ENST00000443563 WASHC2AQ641Q2 1341 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms