RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 ERICH6BQ5W0A0 696 aa11.39□□□□□ -0.59
RER1-205ENST00000443438 CCDC146Q8IYE0 955 aa11.39□□□□□ -0.59
RER1-205ENST00000443438 KIF20BQ96Q89 1820 aa11.39□□□□□ -0.59
RER1-205ENST00000443438 PNPLA6Q8IY17 1366 aa11.39□□□□□ -0.59
RER1-205ENST00000443438 AKAP12Q02952 1782 aa11.39□□□□□ -0.59
RER1-205ENST00000443438 MON2Q7Z3U7 1717 aa11.38□□□□□ -0.59
RER1-205ENST00000443438 SETD1BQ9UPS6 1966 aaKnown RBP11.38□□□□□ -0.59
RER1-205ENST00000443438 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
RER1-205ENST00000443438 NKTRP30414 1462 aaKnown RBP11.38□□□□□ -0.59
RER1-205ENST00000443438 SSH2Q76I76 1423 aa11.37□□□□□ -0.59
RER1-205ENST00000443438 APAF1O14727 1248 aa11.37□□□□□ -0.59
RER1-205ENST00000443438 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
RER1-205ENST00000443438 NME9Q86XW9 330 aa11.37□□□□□ -0.59
RER1-205ENST00000443438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.37□□□□□ -0.59
RER1-205ENST00000443438 TRMT2AQ8IZ69 625 aaKnown RBP11.37□□□□□ -0.59
RER1-205ENST00000443438 CERKQ8TCT0 537 aa11.37□□□□□ -0.59
RER1-205ENST00000443438 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
RER1-205ENST00000443438 ZRANB1Q9UGI0 708 aa11.37□□□□□ -0.59
RER1-205ENST00000443438 IQSEC2Q5JU85 1478 aa11.36□□□□□ -0.59
RER1-205ENST00000443438 ACEP12821 1306 aa11.35□□□□□ -0.59
RER1-205ENST00000443438 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
RER1-205ENST00000443438 NPM3O75607 178 aaKnown RBP11.35□□□□□ -0.59
RER1-205ENST00000443438 NGEFQ8N5V2 710 aa11.35□□□□□ -0.59
RER1-205ENST00000443438 RUNDC1Q96C34 613 aa11.35□□□□□ -0.59
RER1-205ENST00000443438 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
RER1-205ENST00000443438 AATKQ6ZMQ8 1374 aa11.35□□□□□ -0.59
RER1-205ENST00000443438 NRKQ7Z2Y5 1582 aa11.35□□□□□ -0.59
RER1-205ENST00000443438 CHD2O14647 1828 aaKnown RBP11.35□□□□□ -0.59
RER1-205ENST00000443438 TTC21BQ7Z4L5 1316 aa11.35□□□□□ -0.59
RER1-205ENST00000443438 SLFN5Q08AF3 891 aa11.34□□□□□ -0.59
RER1-205ENST00000443438 DUSP27Q5VZP5 1158 aa11.34□□□□□ -0.59
RER1-205ENST00000443438 ANKARQ7Z5J8 1434 aa11.34□□□□□ -0.59
RER1-205ENST00000443438 ITSN1Q15811 1721 aa11.33□□□□□ -0.6
RER1-205ENST00000443438 FBLN1P23142 703 aa11.33□□□□□ -0.6
RER1-205ENST00000443438 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
RER1-205ENST00000443438 PLEKHF1Q96S99 279 aa11.33□□□□□ -0.6
RER1-205ENST00000443438 SPINK5Q9NQ38 1064 aaPredicted RBP11.33□□□□□ -0.6
RER1-205ENST00000443438 RCAN3Q9UKA8 241 aa11.33□□□□□ -0.6
RER1-205ENST00000443438 DMRT2Q9Y5R5 561 aa11.33□□□□□ -0.6
RER1-205ENST00000443438 USP6P35125 1406 aa11.33□□□□□ -0.6
RER1-205ENST00000443438 NUTM2FA1L443 756 aa11.32□□□□□ -0.6
RER1-205ENST00000443438 FMN2Q9NZ56 1722 aa11.32□□□□□ -0.6
RER1-205ENST00000443438 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
RER1-205ENST00000443438 RRP1P56182 461 aaKnown RBP11.31□□□□□ -0.6
RER1-205ENST00000443438 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
RER1-205ENST00000443438 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
RER1-205ENST00000443438 TCP11L2Q8N4U5 519 aa11.31□□□□□ -0.6
RER1-205ENST00000443438 OVOS2A0A0J9YW53 1432 aa11.31□□□□□ -0.6
RER1-205ENST00000443438 OVOS2Q6IE36 1432 aa11.31□□□□□ -0.6
RER1-205ENST00000443438 USP31Q70CQ4 1352 aa11.3□□□□□ -0.6
RER1-205ENST00000443438 NWD1Q149M9 1564 aa11.3□□□□□ -0.6
RER1-205ENST00000443438 DIAPH1O60610 1272 aaKnown RBP11.3□□□□□ -0.6
RER1-205ENST00000443438 WWC1Q8IX03 1113 aa11.3□□□□□ -0.6
RER1-205ENST00000443438 COG3Q96JB2 828 aa11.3□□□□□ -0.6
RER1-205ENST00000443438 PPP4R2Q9NY27 417 aa11.3□□□□□ -0.6
RER1-205ENST00000443438 IL13P35225 146 aa11.29□□□□□ -0.6
RER1-205ENST00000443438 PMFBP1Q8TBY8 1022 aa11.29□□□□□ -0.6
RER1-205ENST00000443438 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
RER1-205ENST00000443438 CDK12Q9NYV4 1490 aaPredicted RBP11.29□□□□□ -0.6
RER1-205ENST00000443438 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
RER1-205ENST00000443438 E9PSI1 815 aa11.28□□□□□ -0.6
RER1-205ENST00000443438 WDR63Q8IWG1 891 aa11.28□□□□□ -0.6
RER1-205ENST00000443438 RRP7AQ9Y3A4 280 aaKnown RBP11.28□□□□□ -0.6
RER1-205ENST00000443438 TTC21AQ8NDW8 1320 aa11.28□□□□□ -0.6
RER1-205ENST00000443438 ADGRL3Q9HAR2 1447 aa11.27□□□□□ -0.6
RER1-205ENST00000443438 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.61
RER1-205ENST00000443438 U2SURPO15042 1029 aaKnown RBP11.27□□□□□ -0.61
RER1-205ENST00000443438 MAP2P11137 1827 aaKnown RBP11.26□□□□□ -0.61
RER1-205ENST00000443438 FCHSD2O94868 740 aa11.26□□□□□ -0.61
RER1-205ENST00000443438 HSPA2P54652 639 aa11.26□□□□□ -0.61
RER1-205ENST00000443438 RRS1Q15050 365 aaKnown RBP11.26□□□□□ -0.61
RER1-205ENST00000443438 RBM33Q96EV2 1170 aaKnown RBP11.26□□□□□ -0.61
RER1-205ENST00000443438 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
RER1-205ENST00000443438 TMPOP42166 694 aaKnown RBP11.25□□□□□ -0.61
RER1-205ENST00000443438 NGDNQ8NEJ9 315 aaKnown RBP11.25□□□□□ -0.61
RER1-205ENST00000443438 TRIM35Q9UPQ4 493 aa11.25□□□□□ -0.61
RER1-205ENST00000443438 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
RER1-205ENST00000443438 LRRC7Q96NW7 1537 aa11.24□□□□□ -0.61
RER1-205ENST00000443438 PIK3C2AO00443 1686 aa11.24□□□□□ -0.61
RER1-205ENST00000443438 USP54Q70EL1 1684 aa11.24□□□□□ -0.61
RER1-205ENST00000443438 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
RER1-205ENST00000443438 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
RER1-205ENST00000443438 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
RER1-205ENST00000443438 PNNQ9H307 717 aaKnown RBP11.23□□□□□ -0.61
RER1-205ENST00000443438 EXOC6Q8TAG9 804 aa11.22□□□□□ -0.61
RER1-205ENST00000443438 PHACTR3Q96KR7 559 aa11.22□□□□□ -0.61
RER1-205ENST00000443438 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
RER1-205ENST00000443438 PLIN1O60240 522 aa11.21□□□□□ -0.61
RER1-205ENST00000443438 PRKAR2BP31323 418 aa11.21□□□□□ -0.61
RER1-205ENST00000443438 EIF4A2Q14240 407 aaKnown RBP11.21□□□□□ -0.61
RER1-205ENST00000443438 B4GALNT3Q6L9W6 998 aa11.21□□□□□ -0.61
RER1-205ENST00000443438 IL16Q14005 1332 aa11.2□□□□□ -0.62
RER1-205ENST00000443438 MAP3K19Q56UN5 1328 aa11.2□□□□□ -0.62
RER1-205ENST00000443438 MAPK8IP3Q9UPT6 1336 aa11.2□□□□□ -0.62
RER1-205ENST00000443438 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
RER1-205ENST00000443438 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
RER1-205ENST00000443438 HMOX1P09601 288 aa11.19□□□□□ -0.62
RER1-205ENST00000443438 RIPK4P57078 832 aa11.19□□□□□ -0.62
RER1-205ENST00000443438 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
RER1-205ENST00000443438 C20orf194Q5TEA3 1177 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms