RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 CGNL1Q0VF96 1302 aa19.15■□□□□ 0.66
CHFR-204ENST00000443047 ARHGAP31Q2M1Z3 1444 aa19.14■□□□□ 0.65
CHFR-204ENST00000443047 PRDM4Q9UKN5 801 aa19.13■□□□□ 0.65
CHFR-204ENST00000443047 WWC1Q8IX03 1113 aa19.13■□□□□ 0.65
CHFR-204ENST00000443047 ARHGEF28Q8N1W1 1705 aaKnown RBP19.13■□□□□ 0.65
CHFR-204ENST00000443047 POLR3AO14802 1390 aaPredicted RBP19.12■□□□□ 0.65
CHFR-204ENST00000443047 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
CHFR-204ENST00000443047 WAPLQ7Z5K2 1190 aa19.12■□□□□ 0.65
CHFR-204ENST00000443047 TCP11L2Q8N4U5 519 aa19.12■□□□□ 0.65
CHFR-204ENST00000443047 FBLN1P23142 703 aa19.11■□□□□ 0.65
CHFR-204ENST00000443047 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
CHFR-204ENST00000443047 A0A1W2PP64 1363 aa19.11■□□□□ 0.65
CHFR-204ENST00000443047 PREX1Q8TCU6 1659 aa19.11■□□□□ 0.65
CHFR-204ENST00000443047 CANXP27824 592 aaKnown RBP19.1■□□□□ 0.65
CHFR-204ENST00000443047 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
CHFR-204ENST00000443047 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHFR-204ENST00000443047 ANKRD36BQ8N2N9 1353 aa19.09■□□□□ 0.65
CHFR-204ENST00000443047 E9PSI1 815 aa19.09■□□□□ 0.65
CHFR-204ENST00000443047 AAMPQ13685 434 aa19.09■□□□□ 0.65
CHFR-204ENST00000443047 TMEM131LA2VDJ0 1609 aa19.09■□□□□ 0.65
CHFR-204ENST00000443047 DIP2BQ9P265 1576 aa19.09■□□□□ 0.65
CHFR-204ENST00000443047 COG6Q9Y2V7 657 aa19.08■□□□□ 0.65
CHFR-204ENST00000443047 BCL2L13Q9BXK5 485 aa19.08■□□□□ 0.64
CHFR-204ENST00000443047 CHMP5Q9NZZ3 219 aa19.08■□□□□ 0.64
CHFR-204ENST00000443047 GAS2L3Q86XJ1 694 aa19.08■□□□□ 0.64
CHFR-204ENST00000443047 U2SURPO15042 1029 aaKnown RBP19.07■□□□□ 0.64
CHFR-204ENST00000443047 RUNDC1Q96C34 613 aa19.07■□□□□ 0.64
CHFR-204ENST00000443047 TBC1D32Q96NH3 1257 aa19.07■□□□□ 0.64
CHFR-204ENST00000443047 CABP1Q9NZU7 370 aa19.07■□□□□ 0.64
CHFR-204ENST00000443047 YTHDC2Q9H6S0 1430 aaKnown RBP19.07■□□□□ 0.64
CHFR-204ENST00000443047 NKTRP30414 1462 aaKnown RBP19.06■□□□□ 0.64
CHFR-204ENST00000443047 CDK19Q9BWU1 502 aa19.06■□□□□ 0.64
CHFR-204ENST00000443047 PANK1Q8TE04 598 aa19.06■□□□□ 0.64
CHFR-204ENST00000443047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.05■□□□□ 0.64
CHFR-204ENST00000443047 PRDM10Q9NQV6 1147 aa19.05■□□□□ 0.64
CHFR-204ENST00000443047 ZHX1Q9UKY1 873 aaPredicted RBP19.05■□□□□ 0.64
CHFR-204ENST00000443047 MAPK8IP3Q9UPT6 1336 aa19.05■□□□□ 0.64
CHFR-204ENST00000443047 SHPRHQ149N8 1683 aa19.05■□□□□ 0.64
CHFR-204ENST00000443047 CFAP53Q96M91 514 aa19.05■□□□□ 0.64
CHFR-204ENST00000443047 TNNQ9UQP3 1299 aa19.05■□□□□ 0.64
CHFR-204ENST00000443047 R3HCC1Q9Y3T6 440 aaKnown RBP19.05■□□□□ 0.64
CHFR-204ENST00000443047 PTPRMP28827 1452 aa19.05■□□□□ 0.64
CHFR-204ENST00000443047 FYB1O15117 783 aa19.04■□□□□ 0.64
CHFR-204ENST00000443047 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
CHFR-204ENST00000443047 MFAP1P55081 439 aaKnown RBP19.03■□□□□ 0.64
CHFR-204ENST00000443047 RIPK4P57078 832 aa19.02■□□□□ 0.64
CHFR-204ENST00000443047 ZFYVE9O95405 1425 aa19.02■□□□□ 0.64
CHFR-204ENST00000443047 MSNP26038 577 aaKnown RBP19.02■□□□□ 0.63
CHFR-204ENST00000443047 CLTCQ00610 1675 aaKnown RBP19.01■□□□□ 0.63
CHFR-204ENST00000443047 NCKAP5LQ9HCH0 1330 aa19.01■□□□□ 0.63
CHFR-204ENST00000443047 CLUAP1Q96AJ1 413 aa19.01■□□□□ 0.63
CHFR-204ENST00000443047 DDX11L8A8MPP1 907 aa19■□□□□ 0.63
CHFR-204ENST00000443047 ALKQ9UM73 1620 aa19■□□□□ 0.63
CHFR-204ENST00000443047 TXNDC2Q86VQ3 553 aa18.99■□□□□ 0.63
CHFR-204ENST00000443047 TSR2Q969E8 191 aaKnown RBP18.99■□□□□ 0.63
CHFR-204ENST00000443047 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
CHFR-204ENST00000443047 FGD1P98174 961 aa18.98■□□□□ 0.63
CHFR-204ENST00000443047 ANP32BQ92688 251 aaKnown RBP18.98■□□□□ 0.63
CHFR-204ENST00000443047 FOXD4L1Q9NU39 408 aa18.98■□□□□ 0.63
CHFR-204ENST00000443047 ABCC11Q96J66 1382 aa18.98■□□□□ 0.63
CHFR-204ENST00000443047 ESF1Q9H501 851 aaKnown RBP18.98■□□□□ 0.63
CHFR-204ENST00000443047 CD163L1Q9NR16 1453 aa18.97■□□□□ 0.63
CHFR-204ENST00000443047 PUS7Q96PZ0 661 aaKnown RBP18.97■□□□□ 0.63
CHFR-204ENST00000443047 RIMS2Q9UQ26 1411 aa18.97■□□□□ 0.63
CHFR-204ENST00000443047 C22orf23Q9BZE7 217 aa18.96■□□□□ 0.63
CHFR-204ENST00000443047 A2ML1A8K2U0 1454 aa18.96■□□□□ 0.63
CHFR-204ENST00000443047 ZSCAN30Q86W11 494 aa18.96■□□□□ 0.63
CHFR-204ENST00000443047 OFD1O75665 1012 aa18.96■□□□□ 0.63
CHFR-204ENST00000443047 HSCBQ8IWL3 235 aa18.96■□□□□ 0.63
CHFR-204ENST00000443047 ZRANB1Q9UGI0 708 aa18.96■□□□□ 0.63
CHFR-204ENST00000443047 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
CHFR-204ENST00000443047 ZBTB7CA1YPR0 619 aa18.95■□□□□ 0.62
CHFR-204ENST00000443047 HDGFL2Q7Z4V5 671 aaPredicted RBP18.95■□□□□ 0.62
CHFR-204ENST00000443047 ATAD2Q6PL18 1390 aa18.95■□□□□ 0.62
CHFR-204ENST00000443047 NASPP49321 788 aaPredicted RBP18.94■□□□□ 0.62
CHFR-204ENST00000443047 RARSP54136 660 aaKnown RBP18.94■□□□□ 0.62
CHFR-204ENST00000443047 IQSEC2Q5JU85 1478 aa18.94■□□□□ 0.62
CHFR-204ENST00000443047 RLBP1P12271 317 aa18.94■□□□□ 0.62
CHFR-204ENST00000443047 NUTM2FA1L443 756 aa18.93■□□□□ 0.62
CHFR-204ENST00000443047 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.93■□□□□ 0.62
CHFR-204ENST00000443047 METP08581 1390 aa18.93■□□□□ 0.62
CHFR-204ENST00000443047 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
CHFR-204ENST00000443047 NLRP1Q9C000 1473 aa18.93■□□□□ 0.62
CHFR-204ENST00000443047 TNPO1Q92973 898 aaKnown RBP18.93■□□□□ 0.62
CHFR-204ENST00000443047 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
CHFR-204ENST00000443047 NSD2O96028 1365 aa18.92■□□□□ 0.62
CHFR-204ENST00000443047 XPCQ01831 940 aaPredicted RBP18.92■□□□□ 0.62
CHFR-204ENST00000443047 ISY1Q9ULR0 285 aaKnown RBP18.92■□□□□ 0.62
CHFR-204ENST00000443047 ZMYM3Q14202 1370 aa18.92■□□□□ 0.62
CHFR-204ENST00000443047 UQCRHLA0A096LP55 91 aa18.91■□□□□ 0.62
CHFR-204ENST00000443047 UQCRHP07919 91 aa18.91■□□□□ 0.62
CHFR-204ENST00000443047 PCDHB15Q9Y5E8 787 aa18.91■□□□□ 0.62
CHFR-204ENST00000443047 ARHGEF40Q8TER5 1519 aa18.91■□□□□ 0.62
CHFR-204ENST00000443047 CEBPAP49715 358 aaPredicted RBP18.9■□□□□ 0.62
CHFR-204ENST00000443047 CCDC173Q0VFZ6 552 aa18.9■□□□□ 0.62
CHFR-204ENST00000443047 PLEKHF1Q96S99 279 aa18.9■□□□□ 0.62
CHFR-204ENST00000443047 NGEFQ8N5V2 710 aa18.9■□□□□ 0.62
CHFR-204ENST00000443047 TMPOP42166 694 aaKnown RBP18.9■□□□□ 0.62
CHFR-204ENST00000443047 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
CHFR-204ENST00000443047 NME9Q86XW9 330 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms