RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 C8orf37Q96NL8 207 aa13.5□□□□□ -0.25
UBA52-202ENST00000442744 L3MBTL2Q969R5 705 aa13.49□□□□□ -0.25
UBA52-202ENST00000442744 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
UBA52-202ENST00000442744 COMMD10Q9Y6G5 202 aa13.49□□□□□ -0.25
UBA52-202ENST00000442744 GAPVD1Q14C86 1478 aa13.49□□□□□ -0.25
UBA52-202ENST00000442744 UGGT2Q9NYU1 1516 aa13.49□□□□□ -0.25
UBA52-202ENST00000442744 PSME1Q06323 249 aa13.49□□□□□ -0.25
UBA52-202ENST00000442744 HELBQ8NG08 1087 aaPredicted RBP13.49□□□□□ -0.25
UBA52-202ENST00000442744 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
UBA52-202ENST00000442744 VGLL3A8MV65 326 aa13.48□□□□□ -0.25
UBA52-202ENST00000442744 ZRANB2O95218 330 aaKnown RBP eCLIP13.48□□□□□ -0.251e-7■□□□□ 11.2
UBA52-202ENST00000442744 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBA52-202ENST00000442744 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
UBA52-202ENST00000442744 LARGE2Q8N3Y3 721 aa13.47□□□□□ -0.25
UBA52-202ENST00000442744 NRBP1Q9UHY1 535 aa13.47□□□□□ -0.25
UBA52-202ENST00000442744 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
UBA52-202ENST00000442744 AMOTL1Q8IY63 956 aa13.47□□□□□ -0.25
UBA52-202ENST00000442744 MKL1Q969V6 931 aa13.47□□□□□ -0.25
UBA52-202ENST00000442744 MPHOSPH9Q99550 1183 aa13.46□□□□□ -0.25
UBA52-202ENST00000442744 CNTLNQ9NXG0 1405 aa13.46□□□□□ -0.25
UBA52-202ENST00000442744 POLA2Q14181 598 aa13.46□□□□□ -0.25
UBA52-202ENST00000442744 NBPF8Q3BBV2 869 aa13.46□□□□□ -0.25
UBA52-202ENST00000442744 CHPF2Q9P2E5 772 aa13.46□□□□□ -0.25
UBA52-202ENST00000442744 LMOD3Q0VAK6 560 aa13.45□□□□□ -0.26
UBA52-202ENST00000442744 C4orf46Q504U0 113 aa13.45□□□□□ -0.26
UBA52-202ENST00000442744 CDK13Q14004 1512 aaKnown RBP13.45□□□□□ -0.26
UBA52-202ENST00000442744 MTA1Q13330 715 aa13.45□□□□□ -0.26
UBA52-202ENST00000442744 PUS10Q3MIT2 529 aaKnown RBP13.45□□□□□ -0.26
UBA52-202ENST00000442744 PRKRIP1Q9H875 184 aaPredicted RBP13.45□□□□□ -0.26
UBA52-202ENST00000442744 TPX2Q9ULW0 747 aaKnown RBP13.45□□□□□ -0.26
UBA52-202ENST00000442744 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
UBA52-202ENST00000442744 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
UBA52-202ENST00000442744 HECW1Q76N89 1606 aa13.44□□□□□ -0.26
UBA52-202ENST00000442744 PPP4CP60510 307 aa13.44□□□□□ -0.26
UBA52-202ENST00000442744 NAALADL2Q58DX5 795 aa13.44□□□□□ -0.26
UBA52-202ENST00000442744 ANKRD23Q86SG2 305 aa13.44□□□□□ -0.26
UBA52-202ENST00000442744 FBXO9Q9UK97 447 aaPredicted RBP13.44□□□□□ -0.26
UBA52-202ENST00000442744 PBRM1Q86U86 1689 aa13.44□□□□□ -0.26
UBA52-202ENST00000442744 GCC2Q8IWJ2 1684 aa13.44□□□□□ -0.26
UBA52-202ENST00000442744 TRIM66O15016 1216 aa13.44□□□□□ -0.26
UBA52-202ENST00000442744 FEZ2Q9UHY8 353 aaPredicted RBP13.44□□□□□ -0.26
UBA52-202ENST00000442744 EIF3JO75822 258 aaKnown RBP13.43□□□□□ -0.26
UBA52-202ENST00000442744 NBPF6Q5VWK0 638 aa13.43□□□□□ -0.26
UBA52-202ENST00000442744 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
UBA52-202ENST00000442744 RNF25Q96BH1 459 aaPredicted RBP13.43□□□□□ -0.26
UBA52-202ENST00000442744 NBPF4Q96M43 638 aa13.43□□□□□ -0.26
UBA52-202ENST00000442744 CTDP1Q9Y5B0 961 aaPredicted RBP13.43□□□□□ -0.26
UBA52-202ENST00000442744 WWC3Q9ULE0 1092 aa13.43□□□□□ -0.26
UBA52-202ENST00000442744 CCDC7Q96M83 1385 aa13.43□□□□□ -0.26
UBA52-202ENST00000442744 CCDC189A1A4V9 331 aa13.42□□□□□ -0.26
UBA52-202ENST00000442744 CFAP69A5D8W1 941 aa13.42□□□□□ -0.26
UBA52-202ENST00000442744 CADPS2Q86UW7 1296 aa13.42□□□□□ -0.26
UBA52-202ENST00000442744 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
UBA52-202ENST00000442744 ZC3H6P61129 1189 aaKnown RBP13.41□□□□□ -0.26
UBA52-202ENST00000442744 PROCA1Q8NCQ7 364 aaPredicted RBP13.41□□□□□ -0.26
UBA52-202ENST00000442744 ZCRB1Q8TBF4 217 aaKnown RBP13.41□□□□□ -0.26
UBA52-202ENST00000442744 ZNF16P17020 682 aaPredicted RBP13.41□□□□□ -0.26
UBA52-202ENST00000442744 MAGI1Q96QZ7 1491 aaPredicted RBP13.41□□□□□ -0.26
UBA52-202ENST00000442744 ZNF644Q9H582 1327 aaPredicted RBP13.41□□□□□ -0.26
UBA52-202ENST00000442744 FANCIQ9NVI1 1328 aa13.41□□□□□ -0.26
UBA52-202ENST00000442744 hCG_2014768A0A024R1R8 64 aa13.4□□□□□ -0.26
UBA52-202ENST00000442744 NBPF10Q6P3W6 841 aaKnown RBP13.4□□□□□ -0.26
UBA52-202ENST00000442744 NCOA1Q15788 1441 aa13.4□□□□□ -0.26
UBA52-202ENST00000442744 TCOF1Q13428 1488 aaKnown RBP13.4□□□□□ -0.26
UBA52-202ENST00000442744 COPB2P35606 906 aa13.4□□□□□ -0.27
UBA52-202ENST00000442744 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
UBA52-202ENST00000442744 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
UBA52-202ENST00000442744 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
UBA52-202ENST00000442744 EPRSP07814 1512 aaKnown RBP13.38□□□□□ -0.27
UBA52-202ENST00000442744 IGBP1P78318 339 aa13.38□□□□□ -0.27
UBA52-202ENST00000442744 NGEFQ8N5V2 710 aa13.38□□□□□ -0.27
UBA52-202ENST00000442744 MAP2K1Q02750 393 aaPredicted RBP13.37□□□□□ -0.27
UBA52-202ENST00000442744 CCDC146Q8IYE0 955 aa13.37□□□□□ -0.27
UBA52-202ENST00000442744 IRF2BPLQ9H1B7 796 aa13.37□□□□□ -0.27
UBA52-202ENST00000442744 JADE2Q9NQC1 790 aa13.37□□□□□ -0.27
UBA52-202ENST00000442744 TTC30BQ8N4P2 665 aa13.37□□□□□ -0.27
UBA52-202ENST00000442744 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
UBA52-202ENST00000442744 EVA1CP58658 441 aa13.36□□□□□ -0.27
UBA52-202ENST00000442744 MAP3K20Q9NYL2 800 aaKnown RBP13.36□□□□□ -0.27
UBA52-202ENST00000442744 AKNAQ7Z591 1439 aa13.36□□□□□ -0.27
UBA52-202ENST00000442744 CT47B1P0C2W7 299 aaPredicted RBP13.36□□□□□ -0.27
UBA52-202ENST00000442744 PTPROQ16827 1216 aa13.36□□□□□ -0.27
UBA52-202ENST00000442744 CENPJQ9HC77 1338 aaPredicted RBP13.36□□□□□ -0.27
UBA52-202ENST00000442744 SSR1P43307 286 aaKnown RBP13.35□□□□□ -0.27
UBA52-202ENST00000442744 PUF60Q9UHX1 559 aaKnown RBP13.35□□□□□ -0.27
UBA52-202ENST00000442744 NEXNQ0ZGT2 675 aa13.35□□□□□ -0.27
UBA52-202ENST00000442744 ZBED9Q6R2W3 1325 aa13.35□□□□□ -0.27
UBA52-202ENST00000442744 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
UBA52-202ENST00000442744 SPACA7Q96KW9 195 aa13.35□□□□□ -0.27
UBA52-202ENST00000442744 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
UBA52-202ENST00000442744 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
UBA52-202ENST00000442744 ADAMTS12P58397 1594 aa13.35□□□□□ -0.27
UBA52-202ENST00000442744 SYNJ2O15056 1496 aa13.35□□□□□ -0.27
UBA52-202ENST00000442744 TDO2P48775 406 aa13.33□□□□□ -0.28
UBA52-202ENST00000442744 CHMP7Q8WUX9 453 aaPredicted RBP13.33□□□□□ -0.28
UBA52-202ENST00000442744 RPRD2Q5VT52 1461 aaKnown RBP13.33□□□□□ -0.28
UBA52-202ENST00000442744 ZRSR2Q15696 482 aaKnown RBP13.33□□□□□ -0.28
UBA52-202ENST00000442744 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
UBA52-202ENST00000442744 ICE2Q659A1 982 aa13.32□□□□□ -0.28
UBA52-202ENST00000442744 G3BP2Q9UN86 482 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms