RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 CRYBG1Q9Y4K1 1723 aa31.57■■■□□ 2.64
HDLBP-220ENST00000442730 RGS12O14924 1447 aa31.57■■■□□ 2.64
HDLBP-220ENST00000442730 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.56■■■□□ 2.64
HDLBP-220ENST00000442730 TRPC5Q9UL62 973 aaPredicted RBP31.55■■■□□ 2.64
HDLBP-220ENST00000442730 EVC2Q86UK5 1308 aa31.54■■■□□ 2.64
HDLBP-220ENST00000442730 PAK3O75914 559 aaPredicted RBP31.54■■■□□ 2.64
HDLBP-220ENST00000442730 CARD11Q9BXL7 1154 aa31.54■■■□□ 2.64
HDLBP-220ENST00000442730 PLCH1Q4KWH8 1693 aa31.52■■■□□ 2.64
HDLBP-220ENST00000442730 PCGF6Q9BYE7 350 aa31.52■■■□□ 2.64
HDLBP-220ENST00000442730 SBNO2Q9Y2G9 1366 aa31.52■■■□□ 2.64
HDLBP-220ENST00000442730 NWD2Q9ULI1 1742 aa31.48■■■□□ 2.63
HDLBP-220ENST00000442730 UNC5CLQ8IV45 518 aa31.47■■■□□ 2.63
HDLBP-220ENST00000442730 PHRF1Q9P1Y6 1649 aaKnown RBP31.46■■■□□ 2.63
HDLBP-220ENST00000442730 CABP1Q9NZU7 370 aa31.45■■■□□ 2.63
HDLBP-220ENST00000442730 CLSPNQ9HAW4 1339 aa31.44■■■□□ 2.62
HDLBP-220ENST00000442730 USP6P35125 1406 aa31.42■■■□□ 2.62
HDLBP-220ENST00000442730 FAM83GA6ND36 823 aa31.42■■■□□ 2.62
HDLBP-220ENST00000442730 COL14A1Q05707 1796 aaKnown RBP31.42■■■□□ 2.62
HDLBP-220ENST00000442730 GLI3P10071 1580 aa31.42■■■□□ 2.62
HDLBP-220ENST00000442730 BRD4O60885 1362 aaPredicted RBP31.41■■■□□ 2.62
HDLBP-220ENST00000442730 ATAD2Q6PL18 1390 aa31.41■■■□□ 2.62
HDLBP-220ENST00000442730 NRAPQ86VF7 1730 aa31.41■■■□□ 2.62
HDLBP-220ENST00000442730 GJD4Q96KN9 370 aaPredicted RBP31.4■■■□□ 2.62
HDLBP-220ENST00000442730 NUTM2GQ5VZR2 741 aa31.39■■■□□ 2.62
HDLBP-220ENST00000442730 NRKQ7Z2Y5 1582 aa31.39■■■□□ 2.61
HDLBP-220ENST00000442730 SSH2Q76I76 1423 aa31.37■■■□□ 2.61
HDLBP-220ENST00000442730 ABTB2Q8N961 1025 aa31.36■■■□□ 2.61
HDLBP-220ENST00000442730 USP19O94966 1318 aa31.35■■■□□ 2.61
HDLBP-220ENST00000442730 VPS72Q15906 364 aa31.35■■■□□ 2.61
HDLBP-220ENST00000442730 AKAP12Q02952 1782 aa31.35■■■□□ 2.61
HDLBP-220ENST00000442730 KIAA0232Q92628 1395 aa31.33■■■□□ 2.61
HDLBP-220ENST00000442730 PRDM11Q9NQV5 511 aa31.33■■■□□ 2.61
HDLBP-220ENST00000442730 UPF1Q92900 1129 aaKnown RBP eCLIP31.32■■■□□ 2.6
HDLBP-220ENST00000442730 BTG4Q9NY30 223 aa31.32■■■□□ 2.6
HDLBP-220ENST00000442730 TIMELESSQ9UNS1 1208 aa31.32■■■□□ 2.6
HDLBP-220ENST00000442730 CPSF1Q10570 1443 aaKnown RBP31.32■■■□□ 2.6
HDLBP-220ENST00000442730 PIK3C2AO00443 1686 aa31.32■■■□□ 2.6
HDLBP-220ENST00000442730 TESK2Q96S53 571 aa31.29■■■□□ 2.6
HDLBP-220ENST00000442730 ST20-MTHFSA0A0A6YYL1 179 aa31.27■■■□□ 2.6
HDLBP-220ENST00000442730 NLRP13Q86W25 1043 aa31.27■■■□□ 2.6
HDLBP-220ENST00000442730 SLIT3O75094 1523 aa31.27■■■□□ 2.6
HDLBP-220ENST00000442730 MON2Q7Z3U7 1717 aa31.27■■■□□ 2.6
HDLBP-220ENST00000442730 ZC3H6P61129 1189 aaKnown RBP31.26■■■□□ 2.59
HDLBP-220ENST00000442730 ZNF692Q9BU19 519 aaPredicted RBP31.26■■■□□ 2.59
HDLBP-220ENST00000442730 CPDO75976 1380 aa31.26■■■□□ 2.59
HDLBP-220ENST00000442730 USP47Q96K76 1375 aa31.26■■■□□ 2.59
HDLBP-220ENST00000442730 CD163L1Q9NR16 1453 aa31.26■■■□□ 2.59
HDLBP-220ENST00000442730 CHRNA2Q15822 529 aa31.25■■■□□ 2.59
HDLBP-220ENST00000442730 CCDC9Q9Y3X0 531 aaKnown RBP31.24■■■□□ 2.59
HDLBP-220ENST00000442730 TTC21BQ7Z4L5 1316 aa31.24■■■□□ 2.59
HDLBP-220ENST00000442730 KTN1Q86UP2 1357 aaKnown RBP31.23■■■□□ 2.59
HDLBP-220ENST00000442730 LMO7Q8WWI1 1683 aa31.22■■■□□ 2.59
HDLBP-220ENST00000442730 PUS7Q96PZ0 661 aaKnown RBP31.22■■■□□ 2.59
HDLBP-220ENST00000442730 EP400Q96L91 3159 aa31.21■■■□□ 2.59
HDLBP-220ENST00000442730 GCP02774 474 aa31.21■■■□□ 2.59
HDLBP-220ENST00000442730 NLRP6P59044 892 aa31.21■■■□□ 2.59
HDLBP-220ENST00000442730 CCER1Q8TC90 406 aaPredicted RBP31.2■■■□□ 2.59
HDLBP-220ENST00000442730 TTC21AQ8NDW8 1320 aa31.2■■■□□ 2.58
HDLBP-220ENST00000442730 ONECUT3O60422 494 aaPredicted RBP31.18■■■□□ 2.58
HDLBP-220ENST00000442730 TMC1Q8TDI8 760 aa31.18■■■□□ 2.58
HDLBP-220ENST00000442730 SPATA31A5Q5VU36 1347 aa31.18■■■□□ 2.58
HDLBP-220ENST00000442730 SPATA31A7Q8IWB4 1347 aa31.18■■■□□ 2.58
HDLBP-220ENST00000442730 CAMTA1Q9Y6Y1 1673 aa31.17■■■□□ 2.58
HDLBP-220ENST00000442730 SEPT12Q8IYM1 358 aa31.17■■■□□ 2.58
HDLBP-220ENST00000442730 BRWD3Q6RI45 1802 aa31.17■■■□□ 2.58
HDLBP-220ENST00000442730 SLC12A5Q9H2X9 1139 aa31.16■■■□□ 2.58
HDLBP-220ENST00000442730 NINLQ9Y2I6 1382 aa31.15■■■□□ 2.58
HDLBP-220ENST00000442730 SLC24A1O60721 1099 aa31.14■■■□□ 2.58
HDLBP-220ENST00000442730 A0A1W2PP64 1363 aa31.14■■■□□ 2.58
HDLBP-220ENST00000442730 FAM98CQ17RN3 349 aaKnown RBP31.13■■■□□ 2.57
HDLBP-220ENST00000442730 USP54Q70EL1 1684 aa31.13■■■□□ 2.57
HDLBP-220ENST00000442730 THSD7AQ9UPZ6 1657 aa31.13■■■□□ 2.57
HDLBP-220ENST00000442730 STRN4Q9NRL3 753 aa31.12■■■□□ 2.57
HDLBP-220ENST00000442730 SPATA31A1Q5TZJ5 1347 aa31.11■■■□□ 2.57
HDLBP-220ENST00000442730 EDC4Q6P2E9 1401 aaKnown RBP31.11■■■□□ 2.57
HDLBP-220ENST00000442730 HDGFL2Q7Z4V5 671 aaPredicted RBP31.11■■■□□ 2.57
HDLBP-220ENST00000442730 NFAT5O94916 1531 aa31.1■■■□□ 2.57
HDLBP-220ENST00000442730 TERF2IPQ9NYB0 399 aa31.1■■■□□ 2.57
HDLBP-220ENST00000442730 COL5A2P05997 1499 aaPredicted RBP31.09■■■□□ 2.57
HDLBP-220ENST00000442730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.09■■■□□ 2.57
HDLBP-220ENST00000442730 AATKQ6ZMQ8 1374 aa31.08■■■□□ 2.57
HDLBP-220ENST00000442730 USP31Q70CQ4 1352 aa31.07■■■□□ 2.56
HDLBP-220ENST00000442730 TMF1P82094 1093 aa31.07■■■□□ 2.56
HDLBP-220ENST00000442730 A0A0G2JS52 829 aa31.06■■■□□ 2.56
HDLBP-220ENST00000442730 MYT1Q01538 1121 aa31.06■■■□□ 2.56
HDLBP-220ENST00000442730 COL18A1P39060 1754 aa31.06■■■□□ 2.56
HDLBP-220ENST00000442730 EVA1CP58658 441 aa31.05■■■□□ 2.56
HDLBP-220ENST00000442730 NME9Q86XW9 330 aa31.05■■■□□ 2.56
HDLBP-220ENST00000442730 KCNH5Q8NCM2 988 aa31.05■■■□□ 2.56
HDLBP-220ENST00000442730 ZBTB7CA1YPR0 619 aa31.04■■■□□ 2.56
HDLBP-220ENST00000442730 LARP1Q6PKG0 1096 aaKnown RBP31.04■■■□□ 2.56
HDLBP-220ENST00000442730 KRT27Q7Z3Y8 459 aa31.04■■■□□ 2.56
HDLBP-220ENST00000442730 ZRANB1Q9UGI0 708 aa31.04■■■□□ 2.56
HDLBP-220ENST00000442730 SOX12O15370 315 aa31.02■■■□□ 2.56
HDLBP-220ENST00000442730 ARHGEF25Q86VW2 580 aa31.02■■■□□ 2.56
HDLBP-220ENST00000442730 OVOS2A0A0J9YW53 1432 aa31■■■□□ 2.55
HDLBP-220ENST00000442730 OVOS2Q6IE36 1432 aa31■■■□□ 2.55
HDLBP-220ENST00000442730 ANKRD36BQ8N2N9 1353 aa31■■■□□ 2.55
HDLBP-220ENST00000442730 ABCC6O95255 1503 aa30.99■■■□□ 2.55
HDLBP-220ENST00000442730 USP35Q9P2H5 1018 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms