RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CRYBG1Q9Y4K1 1723 aa21.08■□□□□ 0.97
CSNK1E-210ENST00000442216 CPSF1Q10570 1443 aaKnown RBP21.07■□□□□ 0.96
CSNK1E-210ENST00000442216 PAK3O75914 559 aaPredicted RBP21.07■□□□□ 0.96
CSNK1E-210ENST00000442216 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
CSNK1E-210ENST00000442216 LMOD2Q6P5Q4 547 aa21.06■□□□□ 0.96
CSNK1E-210ENST00000442216 SSH2Q76I76 1423 aa21.04■□□□□ 0.96
CSNK1E-210ENST00000442216 RGS17Q9UGC6 210 aaPredicted RBP21.04■□□□□ 0.96
CSNK1E-210ENST00000442216 NRKQ7Z2Y5 1582 aa21.04■□□□□ 0.96
CSNK1E-210ENST00000442216 CD163L1Q9NR16 1453 aa21.02■□□□□ 0.96
CSNK1E-210ENST00000442216 ADAMTS2O95450 1211 aa21.02■□□□□ 0.96
CSNK1E-210ENST00000442216 ZNF772Q68DY9 489 aaPredicted RBP21.02■□□□□ 0.96
CSNK1E-210ENST00000442216 KTN1Q86UP2 1357 aaKnown RBP21.01■□□□□ 0.95
CSNK1E-210ENST00000442216 PHRF1Q9P1Y6 1649 aaKnown RBP21.01■□□□□ 0.95
CSNK1E-210ENST00000442216 HSPA5P11021 654 aaKnown RBP21.01■□□□□ 0.95
CSNK1E-210ENST00000442216 ABTB2Q8N961 1025 aa21.01■□□□□ 0.95
CSNK1E-210ENST00000442216 TMC1Q8TDI8 760 aa21.01■□□□□ 0.95
CSNK1E-210ENST00000442216 SLC12A5Q9H2X9 1139 aa21.01■□□□□ 0.95
CSNK1E-210ENST00000442216 TERF2IPQ9NYB0 399 aa21.01■□□□□ 0.95
CSNK1E-210ENST00000442216 HAP1P54257 671 aaPredicted RBP21■□□□□ 0.95
CSNK1E-210ENST00000442216 HDGFL2Q7Z4V5 671 aaPredicted RBP21■□□□□ 0.95
CSNK1E-210ENST00000442216 C8orf37Q96NL8 207 aa21■□□□□ 0.95
CSNK1E-210ENST00000442216 AFF2P51816 1311 aa21■□□□□ 0.95
CSNK1E-210ENST00000442216 TTC21AQ8NDW8 1320 aa21■□□□□ 0.95
CSNK1E-210ENST00000442216 PIK3C2AO00443 1686 aa20.99■□□□□ 0.95
CSNK1E-210ENST00000442216 CABLES1Q8TDN4 633 aa20.99■□□□□ 0.95
CSNK1E-210ENST00000442216 NGLY1Q96IV0 654 aa20.99■□□□□ 0.95
CSNK1E-210ENST00000442216 NLRP13Q86W25 1043 aa20.98■□□□□ 0.95
CSNK1E-210ENST00000442216 FNBP4Q8N3X1 1017 aaPredicted RBP20.98■□□□□ 0.95
CSNK1E-210ENST00000442216 TTC21BQ7Z4L5 1316 aa20.98■□□□□ 0.95
CSNK1E-210ENST00000442216 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.98■□□□□ 0.95
CSNK1E-210ENST00000442216 NWD2Q9ULI1 1742 aa20.98■□□□□ 0.95
CSNK1E-210ENST00000442216 MYOM1P52179 1685 aa20.97■□□□□ 0.95
CSNK1E-210ENST00000442216 USP54Q70EL1 1684 aa20.97■□□□□ 0.95
CSNK1E-210ENST00000442216 EDC4Q6P2E9 1401 aaKnown RBP20.96■□□□□ 0.95
CSNK1E-210ENST00000442216 USP19O94966 1318 aa20.96■□□□□ 0.95
CSNK1E-210ENST00000442216 A0A1W2PP64 1363 aa20.96■□□□□ 0.95
CSNK1E-210ENST00000442216 PLCH1Q4KWH8 1693 aa20.96■□□□□ 0.95
CSNK1E-210ENST00000442216 COL14A1Q05707 1796 aaKnown RBP20.95■□□□□ 0.94
CSNK1E-210ENST00000442216 ANKRD36BQ8N2N9 1353 aa20.95■□□□□ 0.94
CSNK1E-210ENST00000442216 SLIT2O94813 1529 aa20.94■□□□□ 0.94
CSNK1E-210ENST00000442216 POTEAQ6S8J7 498 aa20.94■□□□□ 0.94
CSNK1E-210ENST00000442216 NLRP6P59044 892 aa20.93■□□□□ 0.94
CSNK1E-210ENST00000442216 NUTM2GQ5VZR2 741 aa20.93■□□□□ 0.94
CSNK1E-210ENST00000442216 SLIT3O75094 1523 aa20.93■□□□□ 0.94
CSNK1E-210ENST00000442216 USP21Q9UK80 565 aa20.92■□□□□ 0.94
CSNK1E-210ENST00000442216 PLEKHG5O94827 1062 aa20.91■□□□□ 0.94
CSNK1E-210ENST00000442216 ILDR2Q71H61 639 aa20.91■□□□□ 0.94
CSNK1E-210ENST00000442216 BCL9LQ86UU0 1499 aa20.91■□□□□ 0.94
CSNK1E-210ENST00000442216 USP31Q70CQ4 1352 aa20.9■□□□□ 0.94
CSNK1E-210ENST00000442216 CPDO75976 1380 aa20.89■□□□□ 0.93
CSNK1E-210ENST00000442216 FAM83GA6ND36 823 aa20.89■□□□□ 0.93
CSNK1E-210ENST00000442216 GCP02774 474 aa20.89■□□□□ 0.93
CSNK1E-210ENST00000442216 QTRT2Q9H974 415 aaKnown RBP20.89■□□□□ 0.93
CSNK1E-210ENST00000442216 NRAPQ86VF7 1730 aa20.88■□□□□ 0.93
CSNK1E-210ENST00000442216 UNC5CLQ8IV45 518 aa20.88■□□□□ 0.93
CSNK1E-210ENST00000442216 TRPC5Q9UL62 973 aaPredicted RBP20.88■□□□□ 0.93
CSNK1E-210ENST00000442216 ATRNO75882 1429 aa20.87■□□□□ 0.93
CSNK1E-210ENST00000442216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.87■□□□□ 0.93
CSNK1E-210ENST00000442216 KCNH5Q8NCM2 988 aa20.87■□□□□ 0.93
CSNK1E-210ENST00000442216 PRDM11Q9NQV5 511 aa20.87■□□□□ 0.93
CSNK1E-210ENST00000442216 KIAA0232Q92628 1395 aa20.86■□□□□ 0.93
CSNK1E-210ENST00000442216 RXRBP28702 533 aa20.85■□□□□ 0.93
CSNK1E-210ENST00000442216 CDK12Q9NYV4 1490 aaPredicted RBP20.85■□□□□ 0.93
CSNK1E-210ENST00000442216 KIF20BQ96Q89 1820 aa20.85■□□□□ 0.93
CSNK1E-210ENST00000442216 LMO7Q8WWI1 1683 aa20.84■□□□□ 0.93
CSNK1E-210ENST00000442216 ZC3H6P61129 1189 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-210ENST00000442216 RBM6P78332 1123 aaKnown RBP20.84■□□□□ 0.93
CSNK1E-210ENST00000442216 NME9Q86XW9 330 aa20.84■□□□□ 0.93
CSNK1E-210ENST00000442216 OVOS2A0A0J9YW53 1432 aa20.82■□□□□ 0.92
CSNK1E-210ENST00000442216 OVOS2Q6IE36 1432 aa20.82■□□□□ 0.92
CSNK1E-210ENST00000442216 C11orf95C9JLR9 678 aaPredicted RBP20.82■□□□□ 0.92
CSNK1E-210ENST00000442216 BTG4Q9NY30 223 aa20.82■□□□□ 0.92
CSNK1E-210ENST00000442216 NFAT5O94916 1531 aa20.82■□□□□ 0.92
CSNK1E-210ENST00000442216 COL18A1P39060 1754 aa20.81■□□□□ 0.92
CSNK1E-210ENST00000442216 ABCC6O95255 1503 aa20.8■□□□□ 0.92
CSNK1E-210ENST00000442216 VPS72Q15906 364 aa20.8■□□□□ 0.92
CSNK1E-210ENST00000442216 POLR3GLQ9BT43 218 aa20.8■□□□□ 0.92
CSNK1E-210ENST00000442216 LTN1O94822 1766 aa20.8■□□□□ 0.92
CSNK1E-210ENST00000442216 CHRNA2Q15822 529 aa20.79■□□□□ 0.92
CSNK1E-210ENST00000442216 GJD4Q96KN9 370 aaPredicted RBP20.79■□□□□ 0.92
CSNK1E-210ENST00000442216 ZRANB1Q9UGI0 708 aa20.79■□□□□ 0.92
CSNK1E-210ENST00000442216 AATKQ6ZMQ8 1374 aa20.79■□□□□ 0.92
CSNK1E-210ENST00000442216 CAMTA1Q9Y6Y1 1673 aa20.78■□□□□ 0.92
CSNK1E-210ENST00000442216 ARHGEF25Q86VW2 580 aa20.78■□□□□ 0.92
CSNK1E-210ENST00000442216 COG3Q96JB2 828 aa20.78■□□□□ 0.92
CSNK1E-210ENST00000442216 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
CSNK1E-210ENST00000442216 NSD3Q9BZ95 1437 aa20.78■□□□□ 0.92
CSNK1E-210ENST00000442216 KIF7Q2M1P5 1343 aa20.78■□□□□ 0.92
CSNK1E-210ENST00000442216 GLI3P10071 1580 aa20.77■□□□□ 0.92
CSNK1E-210ENST00000442216 FYB1O15117 783 aa20.77■□□□□ 0.92
CSNK1E-210ENST00000442216 RGPD5Q99666 1765 aa20.77■□□□□ 0.91
CSNK1E-210ENST00000442216 ZEB1P37275 1124 aaPredicted RBP20.76■□□□□ 0.91
CSNK1E-210ENST00000442216 ANKRD26Q9UPS8 1709 aa20.75■□□□□ 0.91
CSNK1E-210ENST00000442216 CGNL1Q0VF96 1302 aa20.74■□□□□ 0.91
CSNK1E-210ENST00000442216 PANK3Q9H999 370 aa20.73■□□□□ 0.91
CSNK1E-210ENST00000442216 COL5A2P05997 1499 aaPredicted RBP20.73■□□□□ 0.91
CSNK1E-210ENST00000442216 CCDC7Q96M83 1385 aa20.72■□□□□ 0.91
CSNK1E-210ENST00000442216 RGS12O14924 1447 aa20.72■□□□□ 0.91
CSNK1E-210ENST00000442216 EVA1CP58658 441 aa20.72■□□□□ 0.91
CSNK1E-210ENST00000442216 GGNBP2Q9H3C7 697 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms