RNA–Protein interactions for RNA: ENST00000441708.1

CTNNB1-208, Transcript of catenin beta 1, humanhuman

TSL 4

Gene CTNNB1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-208ENST00000441708 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.21
CTNNB1-208ENST00000441708 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.22
CTNNB1-208ENST00000441708 LMO7Q8WWI1 1683 aa13.7□□□□□ -0.22
CTNNB1-208ENST00000441708 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
CTNNB1-208ENST00000441708 RGPD3A6NKT7 1758 aaPredicted RBP13.7□□□□□ -0.22
CTNNB1-208ENST00000441708 RGPD4Q7Z3J3 1758 aa13.7□□□□□ -0.22
CTNNB1-208ENST00000441708 NRKQ7Z2Y5 1582 aa13.7□□□□□ -0.22
CTNNB1-208ENST00000441708 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
CTNNB1-208ENST00000441708 A0A0G2JS52 829 aa13.69□□□□□ -0.22
CTNNB1-208ENST00000441708 MYT1Q01538 1121 aa13.69□□□□□ -0.22
CTNNB1-208ENST00000441708 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
CTNNB1-208ENST00000441708 FAM182BQ5T319 152 aa13.69□□□□□ -0.22
CTNNB1-208ENST00000441708 KIAA1210Q9ULL0 1709 aa13.68□□□□□ -0.22
CTNNB1-208ENST00000441708 HRCP23327 699 aa13.68□□□□□ -0.22
CTNNB1-208ENST00000441708 BAG6P46379 1132 aa13.68□□□□□ -0.22
CTNNB1-208ENST00000441708 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
CTNNB1-208ENST00000441708 CAMTA1Q9Y6Y1 1673 aa13.68□□□□□ -0.22
CTNNB1-208ENST00000441708 DISP2A7MBM2 1401 aa13.67□□□□□ -0.22
CTNNB1-208ENST00000441708 PRR36Q9H6K5 1346 aa13.66□□□□□ -0.22
CTNNB1-208ENST00000441708 EN1Q05925 392 aaPredicted RBP13.66□□□□□ -0.22
CTNNB1-208ENST00000441708 PEAK1Q9H792 1746 aa13.66□□□□□ -0.22
CTNNB1-208ENST00000441708 ATP7BP35670 1465 aa13.66□□□□□ -0.22
CTNNB1-208ENST00000441708 CHD4Q14839 1912 aa13.66□□□□□ -0.22
CTNNB1-208ENST00000441708 HIRIP3Q9BW71 556 aaPredicted RBP13.65□□□□□ -0.22
CTNNB1-208ENST00000441708 QRICH2Q9H0J4 1663 aa13.65□□□□□ -0.22
CTNNB1-208ENST00000441708 SPATA31A5Q5VU36 1347 aa13.64□□□□□ -0.23
CTNNB1-208ENST00000441708 SPATA31A7Q8IWB4 1347 aa13.64□□□□□ -0.23
CTNNB1-208ENST00000441708 CASZ1Q86V15 1759 aa13.64□□□□□ -0.23
CTNNB1-208ENST00000441708 POGKQ9P215 609 aa13.64□□□□□ -0.23
CTNNB1-208ENST00000441708 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
CTNNB1-208ENST00000441708 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
CTNNB1-208ENST00000441708 GPRASP1Q5JY77 1395 aa13.63□□□□□ -0.23
CTNNB1-208ENST00000441708 R3HDM1Q15032 1099 aaKnown RBP13.62□□□□□ -0.23
CTNNB1-208ENST00000441708 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
CTNNB1-208ENST00000441708 COL18A1P39060 1754 aa13.62□□□□□ -0.23
CTNNB1-208ENST00000441708 KAT6BQ8WYB5 2073 aa13.62□□□□□ -0.23
CTNNB1-208ENST00000441708 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
CTNNB1-208ENST00000441708 EZH2Q15910 746 aaKnown RBP13.61□□□□□ -0.23
CTNNB1-208ENST00000441708 KIAA0232Q92628 1395 aa13.59□□□□□ -0.23
CTNNB1-208ENST00000441708 RAB3GAP2Q9H2M9 1393 aa13.59□□□□□ -0.23
CTNNB1-208ENST00000441708 SPATA31A1Q5TZJ5 1347 aa13.59□□□□□ -0.23
CTNNB1-208ENST00000441708 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
CTNNB1-208ENST00000441708 PRDM11Q9NQV5 511 aa13.58□□□□□ -0.24
CTNNB1-208ENST00000441708 PIK3C2AO00443 1686 aa13.58□□□□□ -0.24
CTNNB1-208ENST00000441708 MYOM1P52179 1685 aa13.57□□□□□ -0.24
CTNNB1-208ENST00000441708 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
CTNNB1-208ENST00000441708 TRIM37O94972 964 aa13.57□□□□□ -0.24
CTNNB1-208ENST00000441708 CHRNA2Q15822 529 aa13.57□□□□□ -0.24
CTNNB1-208ENST00000441708 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
CTNNB1-208ENST00000441708 LTN1O94822 1766 aa13.56□□□□□ -0.24
CTNNB1-208ENST00000441708 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
CTNNB1-208ENST00000441708 CAMKK2Q96RR4 588 aa13.56□□□□□ -0.24
CTNNB1-208ENST00000441708 TRIM26Q12899 539 aaPredicted RBP13.55□□□□□ -0.24
CTNNB1-208ENST00000441708 STRN4Q9NRL3 753 aa13.55□□□□□ -0.24
CTNNB1-208ENST00000441708 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
CTNNB1-208ENST00000441708 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
CTNNB1-208ENST00000441708 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
CTNNB1-208ENST00000441708 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
CTNNB1-208ENST00000441708 POLR3AO14802 1390 aaPredicted RBP13.53□□□□□ -0.24
CTNNB1-208ENST00000441708 PARD3Q8TEW0 1356 aa13.53□□□□□ -0.24
CTNNB1-208ENST00000441708 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
CTNNB1-208ENST00000441708 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.25
CTNNB1-208ENST00000441708 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
CTNNB1-208ENST00000441708 COL5A2P05997 1499 aaPredicted RBP13.51□□□□□ -0.25
CTNNB1-208ENST00000441708 APBA3O96018 575 aa13.51□□□□□ -0.25
CTNNB1-208ENST00000441708 NUDT16Q96DE0 195 aaKnown RBP13.51□□□□□ -0.25
CTNNB1-208ENST00000441708 BTAF1O14981 1849 aa13.5□□□□□ -0.25
CTNNB1-208ENST00000441708 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
CTNNB1-208ENST00000441708 SLIT3O75094 1523 aa13.5□□□□□ -0.25
CTNNB1-208ENST00000441708 NHSQ6T4R5 1651 aa13.5□□□□□ -0.25
CTNNB1-208ENST00000441708 ACEP12821 1306 aa13.49□□□□□ -0.25
CTNNB1-208ENST00000441708 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
CTNNB1-208ENST00000441708 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
CTNNB1-208ENST00000441708 TRPM1Q7Z4N2 1603 aa13.49□□□□□ -0.25
CTNNB1-208ENST00000441708 QSER1Q2KHR3 1735 aa13.48□□□□□ -0.25
CTNNB1-208ENST00000441708 CPDO75976 1380 aa13.47□□□□□ -0.25
CTNNB1-208ENST00000441708 USP19O94966 1318 aa13.47□□□□□ -0.25
CTNNB1-208ENST00000441708 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
CTNNB1-208ENST00000441708 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
CTNNB1-208ENST00000441708 RGPD2P0DJD1 1756 aa13.46□□□□□ -0.25
CTNNB1-208ENST00000441708 EVA1CP58658 441 aa13.46□□□□□ -0.25
CTNNB1-208ENST00000441708 PDE3BQ13370 1112 aa13.46□□□□□ -0.25
CTNNB1-208ENST00000441708 PPIP5K1Q6PFW1 1433 aa13.46□□□□□ -0.26
CTNNB1-208ENST00000441708 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
CTNNB1-208ENST00000441708 TCP11L2Q8N4U5 519 aa13.45□□□□□ -0.26
CTNNB1-208ENST00000441708 OVOS2A0A0G2JMS6 1433 aa13.45□□□□□ -0.26
CTNNB1-208ENST00000441708 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
CTNNB1-208ENST00000441708 CRB1P82279 1406 aa13.45□□□□□ -0.26
CTNNB1-208ENST00000441708 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
CTNNB1-208ENST00000441708 COL24A1Q17RW2 1714 aa13.44□□□□□ -0.26
CTNNB1-208ENST00000441708 YY1P25490 414 aa13.44□□□□□ -0.26
CTNNB1-208ENST00000441708 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
CTNNB1-208ENST00000441708 PAPPAQ13219 1627 aa13.43□□□□□ -0.26
CTNNB1-208ENST00000441708 PLEKHG3A1L390 1219 aa13.42□□□□□ -0.26
CTNNB1-208ENST00000441708 NBPF14Q5TI25 921 aa13.42□□□□□ -0.26
CTNNB1-208ENST00000441708 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
CTNNB1-208ENST00000441708 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
CTNNB1-208ENST00000441708 THRAP3Q9Y2W1 955 aaKnown RBP13.41□□□□□ -0.26
CTNNB1-208ENST00000441708 SHANK3Q9BYB0 1731 aa13.41□□□□□ -0.26
CTNNB1-208ENST00000441708 UTRNP46939 3433 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms