RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
PDGFB-203ENST00000440375 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
PDGFB-203ENST00000440375 NRAPQ86VF7 1730 aa17.22■□□□□ 0.35
PDGFB-203ENST00000440375 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
PDGFB-203ENST00000440375 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
PDGFB-203ENST00000440375 ACEP12821 1306 aa17.21■□□□□ 0.34
PDGFB-203ENST00000440375 VPS72Q15906 364 aa17.2■□□□□ 0.34
PDGFB-203ENST00000440375 CCDC61Q9Y6R9 512 aa17.2■□□□□ 0.34
PDGFB-203ENST00000440375 PHRF1Q9P1Y6 1649 aaKnown RBP17.19■□□□□ 0.34
PDGFB-203ENST00000440375 COL14A1Q05707 1796 aaKnown RBP17.19■□□□□ 0.34
PDGFB-203ENST00000440375 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
PDGFB-203ENST00000440375 SRPK2P78362 688 aaKnown RBP17.18■□□□□ 0.34
PDGFB-203ENST00000440375 NUTM2GQ5VZR2 741 aa17.18■□□□□ 0.34
PDGFB-203ENST00000440375 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
PDGFB-203ENST00000440375 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
PDGFB-203ENST00000440375 ROCK2O75116 1388 aaKnown RBP17.17■□□□□ 0.34
PDGFB-203ENST00000440375 NBPF8Q3BBV2 869 aa17.17■□□□□ 0.34
PDGFB-203ENST00000440375 BTG4Q9NY30 223 aa17.17■□□□□ 0.34
PDGFB-203ENST00000440375 BRWD3Q6RI45 1802 aa17.17■□□□□ 0.34
PDGFB-203ENST00000440375 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
PDGFB-203ENST00000440375 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
PDGFB-203ENST00000440375 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
PDGFB-203ENST00000440375 KIAA0232Q92628 1395 aa17.15■□□□□ 0.34
PDGFB-203ENST00000440375 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
PDGFB-203ENST00000440375 CHRNA2Q15822 529 aa17.13■□□□□ 0.33
PDGFB-203ENST00000440375 ONECUT3O60422 494 aaPredicted RBP17.11■□□□□ 0.33
PDGFB-203ENST00000440375 ZC3H6P61129 1189 aaKnown RBP17.11■□□□□ 0.33
PDGFB-203ENST00000440375 FAM98CQ17RN3 349 aaKnown RBP17.11■□□□□ 0.33
PDGFB-203ENST00000440375 CABP1Q9NZU7 370 aa17.11■□□□□ 0.33
PDGFB-203ENST00000440375 USP19O94966 1318 aa17.11■□□□□ 0.33
PDGFB-203ENST00000440375 USP6P35125 1406 aa17.11■□□□□ 0.33
PDGFB-203ENST00000440375 ABTB2Q8N961 1025 aa17.1■□□□□ 0.33
PDGFB-203ENST00000440375 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
PDGFB-203ENST00000440375 SPATA31A5Q5VU36 1347 aa17.09■□□□□ 0.33
PDGFB-203ENST00000440375 EVC2Q86UK5 1308 aa17.09■□□□□ 0.33
PDGFB-203ENST00000440375 SPATA31A7Q8IWB4 1347 aa17.09■□□□□ 0.33
PDGFB-203ENST00000440375 THSD7AQ9UPZ6 1657 aa17.08■□□□□ 0.32
PDGFB-203ENST00000440375 TONSLQ96HA7 1378 aa17.08■□□□□ 0.32
PDGFB-203ENST00000440375 A0A0G2JS52 829 aa17.08■□□□□ 0.32
PDGFB-203ENST00000440375 MYT1Q01538 1121 aa17.08■□□□□ 0.32
PDGFB-203ENST00000440375 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
PDGFB-203ENST00000440375 SSH2Q76I76 1423 aa17.07■□□□□ 0.32
PDGFB-203ENST00000440375 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
PDGFB-203ENST00000440375 KRT27Q7Z3Y8 459 aa17.07■□□□□ 0.32
PDGFB-203ENST00000440375 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
PDGFB-203ENST00000440375 LMO7Q8WWI1 1683 aa17.07■□□□□ 0.32
PDGFB-203ENST00000440375 CAMTA1Q9Y6Y1 1673 aa17.06■□□□□ 0.32
PDGFB-203ENST00000440375 CPDO75976 1380 aa17.05■□□□□ 0.32
PDGFB-203ENST00000440375 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
PDGFB-203ENST00000440375 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
PDGFB-203ENST00000440375 SPATA31A1Q5TZJ5 1347 aa17.04■□□□□ 0.32
PDGFB-203ENST00000440375 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
PDGFB-203ENST00000440375 CARD11Q9BXL7 1154 aa17.04■□□□□ 0.32
PDGFB-203ENST00000440375 SLIT3O75094 1523 aa17.04■□□□□ 0.32
PDGFB-203ENST00000440375 SBNO2Q9Y2G9 1366 aa17.03■□□□□ 0.32
PDGFB-203ENST00000440375 GCP02774 474 aa17.03■□□□□ 0.32
PDGFB-203ENST00000440375 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
PDGFB-203ENST00000440375 AKAP12Q02952 1782 aa17.02■□□□□ 0.32
PDGFB-203ENST00000440375 FAM182BQ5T319 152 aa17.02■□□□□ 0.32
PDGFB-203ENST00000440375 DEFB132Q7Z7B7 95 aa17.02■□□□□ 0.32
PDGFB-203ENST00000440375 NLRP6P59044 892 aa17.01■□□□□ 0.31
PDGFB-203ENST00000440375 LARP1Q6PKG0 1096 aaKnown RBP17.01■□□□□ 0.31
PDGFB-203ENST00000440375 CPSF1Q10570 1443 aaKnown RBP17.01■□□□□ 0.31
PDGFB-203ENST00000440375 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
PDGFB-203ENST00000440375 USP35Q9P2H5 1018 aa17■□□□□ 0.31
PDGFB-203ENST00000440375 TTC21BQ7Z4L5 1316 aa16.99■□□□□ 0.31
PDGFB-203ENST00000440375 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
PDGFB-203ENST00000440375 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
PDGFB-203ENST00000440375 MON2Q7Z3U7 1717 aa16.98■□□□□ 0.31
PDGFB-203ENST00000440375 EVA1CP58658 441 aa16.97■□□□□ 0.31
PDGFB-203ENST00000440375 KTN1Q86UP2 1357 aaKnown RBP16.97■□□□□ 0.31
PDGFB-203ENST00000440375 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.31
PDGFB-203ENST00000440375 NFAT5O94916 1531 aa16.96■□□□□ 0.3
PDGFB-203ENST00000440375 COL18A1P39060 1754 aa16.95■□□□□ 0.3
PDGFB-203ENST00000440375 AATKQ6ZMQ8 1374 aa16.95■□□□□ 0.3
PDGFB-203ENST00000440375 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
PDGFB-203ENST00000440375 ZRANB1Q9UGI0 708 aa16.95■□□□□ 0.3
PDGFB-203ENST00000440375 TNS1Q9HBL0 1735 aaKnown RBP16.95■□□□□ 0.3
PDGFB-203ENST00000440375 SOX12O15370 315 aa16.94■□□□□ 0.3
PDGFB-203ENST00000440375 BARGINQ6ZT62 677 aa16.94■□□□□ 0.3
PDGFB-203ENST00000440375 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
PDGFB-203ENST00000440375 TTC21AQ8NDW8 1320 aa16.94■□□□□ 0.3
PDGFB-203ENST00000440375 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
PDGFB-203ENST00000440375 CRB1P82279 1406 aa16.93■□□□□ 0.3
PDGFB-203ENST00000440375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDGFB-203ENST00000440375 TESK2Q96S53 571 aa16.92■□□□□ 0.3
PDGFB-203ENST00000440375 AXIN2Q9Y2T1 843 aa16.92■□□□□ 0.3
PDGFB-203ENST00000440375 ST20-MTHFSA0A0A6YYL1 179 aa16.91■□□□□ 0.3
PDGFB-203ENST00000440375 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
PDGFB-203ENST00000440375 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
PDGFB-203ENST00000440375 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
PDGFB-203ENST00000440375 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
PDGFB-203ENST00000440375 A0A1W2PP64 1363 aa16.9■□□□□ 0.3
PDGFB-203ENST00000440375 PARP4Q9UKK3 1724 aaKnown RBP16.9■□□□□ 0.3
PDGFB-203ENST00000440375 BAG6P46379 1132 aa16.9■□□□□ 0.3
PDGFB-203ENST00000440375 NME9Q86XW9 330 aa16.9■□□□□ 0.3
PDGFB-203ENST00000440375 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
PDGFB-203ENST00000440375 DISP2A7MBM2 1401 aa16.89■□□□□ 0.29
PDGFB-203ENST00000440375 EN1Q05925 392 aaPredicted RBP16.89■□□□□ 0.29
PDGFB-203ENST00000440375 USP31Q70CQ4 1352 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms