RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ARHGAP23Q9P227 1491 aa19.76■□□□□ 0.75
CPSF7-205ENST00000439958 SLIT1O75093 1534 aa19.76■□□□□ 0.75
CPSF7-205ENST00000439958 POLKQ9UBT6 870 aa19.76■□□□□ 0.75
CPSF7-205ENST00000439958 NLRP6P59044 892 aa19.75■□□□□ 0.75
CPSF7-205ENST00000439958 TTC21BQ7Z4L5 1316 aa19.74■□□□□ 0.75
CPSF7-205ENST00000439958 TECPR2O15040 1411 aa19.74■□□□□ 0.75
CPSF7-205ENST00000439958 BLMP54132 1417 aaPredicted RBP19.74■□□□□ 0.75
CPSF7-205ENST00000439958 SETD1AO15047 1707 aaKnown RBP19.74■□□□□ 0.75
CPSF7-205ENST00000439958 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
CPSF7-205ENST00000439958 LAS1LQ9Y4W2 734 aaKnown RBP19.73■□□□□ 0.75
CPSF7-205ENST00000439958 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
CPSF7-205ENST00000439958 SETD1BQ9UPS6 1966 aaKnown RBP19.73■□□□□ 0.75
CPSF7-205ENST00000439958 ABTB2Q8N961 1025 aa19.72■□□□□ 0.75
CPSF7-205ENST00000439958 LTV1Q96GA3 475 aaPredicted RBP19.72■□□□□ 0.75
CPSF7-205ENST00000439958 PSME1Q06323 249 aa19.72■□□□□ 0.75
CPSF7-205ENST00000439958 FOXO3O43524 673 aa19.71■□□□□ 0.75
CPSF7-205ENST00000439958 EDC4Q6P2E9 1401 aaKnown RBP19.71■□□□□ 0.75
CPSF7-205ENST00000439958 ATP7BP35670 1465 aa19.7■□□□□ 0.74
CPSF7-205ENST00000439958 NPHP4O75161 1426 aaPredicted RBP19.7■□□□□ 0.74
CPSF7-205ENST00000439958 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
CPSF7-205ENST00000439958 PRKAR2BP31323 418 aa19.7■□□□□ 0.74
CPSF7-205ENST00000439958 WWC1Q8IX03 1113 aa19.69■□□□□ 0.74
CPSF7-205ENST00000439958 AMPHP49418 695 aa19.69■□□□□ 0.74
CPSF7-205ENST00000439958 PHF8Q9UPP1 1060 aa19.69■□□□□ 0.74
CPSF7-205ENST00000439958 CCDC136Q96JN2 1154 aa19.68■□□□□ 0.74
CPSF7-205ENST00000439958 CPS1P31327 1500 aa19.68■□□□□ 0.74
CPSF7-205ENST00000439958 MED14O60244 1454 aa19.68■□□□□ 0.74
CPSF7-205ENST00000439958 RRP1P56182 461 aaKnown RBP19.67■□□□□ 0.74
CPSF7-205ENST00000439958 ORAI2Q96SN7 254 aa19.67■□□□□ 0.74
CPSF7-205ENST00000439958 BCL2L13Q9BXK5 485 aa19.67■□□□□ 0.74
CPSF7-205ENST00000439958 ADAMTSL3P82987 1691 aa19.67■□□□□ 0.74
CPSF7-205ENST00000439958 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.67■□□□□ 0.74
CPSF7-205ENST00000439958 PLEKHG3A1L390 1219 aa19.67■□□□□ 0.74
CPSF7-205ENST00000439958 RIPK4P57078 832 aa19.66■□□□□ 0.74
CPSF7-205ENST00000439958 HSP90AB2PQ58FF8 381 aa19.65■□□□□ 0.74
CPSF7-205ENST00000439958 DUSP27Q5VZP5 1158 aa19.65■□□□□ 0.74
CPSF7-205ENST00000439958 PPP4R2Q9NY27 417 aa19.65■□□□□ 0.74
CPSF7-205ENST00000439958 CPSF1Q10570 1443 aaKnown RBP19.65■□□□□ 0.74
CPSF7-205ENST00000439958 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
CPSF7-205ENST00000439958 E9PSI1 815 aa19.64■□□□□ 0.73
CPSF7-205ENST00000439958 SLFN5Q08AF3 891 aa19.64■□□□□ 0.73
CPSF7-205ENST00000439958 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
CPSF7-205ENST00000439958 TSR2Q969E8 191 aaKnown RBP19.63■□□□□ 0.73
CPSF7-205ENST00000439958 ATF3P18847 181 aa19.63■□□□□ 0.73
CPSF7-205ENST00000439958 THUMPD2Q9BTF0 503 aaKnown RBP19.63■□□□□ 0.73
CPSF7-205ENST00000439958 PTCH1Q13635 1447 aa19.62■□□□□ 0.73
CPSF7-205ENST00000439958 SULT6B1Q6IMI4 303 aa19.62■□□□□ 0.73
CPSF7-205ENST00000439958 NKTRP30414 1462 aaKnown RBP19.62■□□□□ 0.73
CPSF7-205ENST00000439958 USP6P35125 1406 aa19.62■□□□□ 0.73
CPSF7-205ENST00000439958 TMPOP42166 694 aaKnown RBP19.61■□□□□ 0.73
CPSF7-205ENST00000439958 DDX17Q92841 729 aaKnown RBP19.61■□□□□ 0.73
CPSF7-205ENST00000439958 KDM4FA0A1W2PPD8 638 aa19.6■□□□□ 0.73
CPSF7-205ENST00000439958 AEBP1Q8IUX7 1158 aa19.6■□□□□ 0.73
CPSF7-205ENST00000439958 BCAR3O75815 825 aa19.6■□□□□ 0.73
CPSF7-205ENST00000439958 PHACTR3Q96KR7 559 aa19.6■□□□□ 0.73
CPSF7-205ENST00000439958 PIK3R4Q99570 1358 aa19.59■□□□□ 0.73
CPSF7-205ENST00000439958 DIP2AQ14689 1571 aa19.59■□□□□ 0.73
CPSF7-205ENST00000439958 PNNQ9H307 717 aaKnown RBP19.59■□□□□ 0.73
CPSF7-205ENST00000439958 CDC42BPGQ6DT37 1551 aa19.59■□□□□ 0.73
CPSF7-205ENST00000439958 C20orf194Q5TEA3 1177 aa19.58■□□□□ 0.73
CPSF7-205ENST00000439958 MAP3K19Q56UN5 1328 aa19.57■□□□□ 0.72
CPSF7-205ENST00000439958 KNDC1Q76NI1 1749 aa19.57■□□□□ 0.72
CPSF7-205ENST00000439958 ELL2O00472 640 aaPredicted RBP19.56■□□□□ 0.72
CPSF7-205ENST00000439958 EIF4A2Q14240 407 aaKnown RBP19.56■□□□□ 0.72
CPSF7-205ENST00000439958 ZNF521Q96K83 1311 aa19.56■□□□□ 0.72
CPSF7-205ENST00000439958 FCHSD2O94868 740 aa19.56■□□□□ 0.72
CPSF7-205ENST00000439958 DCTN1Q14203 1278 aa19.56■□□□□ 0.72
CPSF7-205ENST00000439958 CRBNQ96SW2 442 aa19.55■□□□□ 0.72
CPSF7-205ENST00000439958 IL13P35225 146 aa19.55■□□□□ 0.72
CPSF7-205ENST00000439958 USP32Q8NFA0 1604 aa19.55■□□□□ 0.72
CPSF7-205ENST00000439958 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.54■□□□□ 0.72
CPSF7-205ENST00000439958 CLUAP1Q96AJ1 413 aa19.54■□□□□ 0.72
CPSF7-205ENST00000439958 MYH16Q9H6N6 1097 aa19.54■□□□□ 0.72
CPSF7-205ENST00000439958 C19orf44Q9H6X5 657 aa19.54■□□□□ 0.72
CPSF7-205ENST00000439958 INSRP06213 1382 aa19.53■□□□□ 0.72
CPSF7-205ENST00000439958 TTC21AQ8NDW8 1320 aa19.53■□□□□ 0.72
CPSF7-205ENST00000439958 FAM83GA6ND36 823 aa19.53■□□□□ 0.72
CPSF7-205ENST00000439958 RSPH6AQ9H0K4 717 aa19.53■□□□□ 0.72
CPSF7-205ENST00000439958 TMEM94Q12767 1356 aa19.53■□□□□ 0.72
CPSF7-205ENST00000439958 USHBP1Q8N6Y0 703 aa19.53■□□□□ 0.72
CPSF7-205ENST00000439958 PLEKHF1Q96S99 279 aa19.52■□□□□ 0.72
CPSF7-205ENST00000439958 TCERG1O14776 1098 aaKnown RBP19.52■□□□□ 0.71
CPSF7-205ENST00000439958 RGPD8O14715 1765 aaPredicted RBP19.51■□□□□ 0.71
CPSF7-205ENST00000439958 KIF20BQ96Q89 1820 aa19.51■□□□□ 0.71
CPSF7-205ENST00000439958 EXOSC9Q06265 439 aaKnown RBP19.5■□□□□ 0.71
CPSF7-205ENST00000439958 NGEFQ8N5V2 710 aa19.5■□□□□ 0.71
CPSF7-205ENST00000439958 ITSN1Q15811 1721 aa19.5■□□□□ 0.71
CPSF7-205ENST00000439958 MAP2P11137 1827 aaKnown RBP19.5■□□□□ 0.71
CPSF7-205ENST00000439958 ZC3H6P61129 1189 aaKnown RBP19.5■□□□□ 0.71
CPSF7-205ENST00000439958 KRT28Q7Z3Y7 464 aa19.5■□□□□ 0.71
CPSF7-205ENST00000439958 TRIM35Q9UPQ4 493 aa19.5■□□□□ 0.71
CPSF7-205ENST00000439958 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
CPSF7-205ENST00000439958 WDR63Q8IWG1 891 aa19.48■□□□□ 0.71
CPSF7-205ENST00000439958 ZNF335Q9H4Z2 1342 aaPredicted RBP19.48■□□□□ 0.71
CPSF7-205ENST00000439958 NFE2L2Q16236 605 aa19.47■□□□□ 0.71
CPSF7-205ENST00000439958 SHPRHQ149N8 1683 aa19.47■□□□□ 0.71
CPSF7-205ENST00000439958 ERICH6BQ5W0A0 696 aa19.47■□□□□ 0.71
CPSF7-205ENST00000439958 PNPLA6Q8IY17 1366 aa19.47■□□□□ 0.71
CPSF7-205ENST00000439958 CABLES1Q8TDN4 633 aa19.47■□□□□ 0.71
CPSF7-205ENST00000439958 MCM10Q7L590 875 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms