RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 MAP7D2Q96T17 732 aa14.36□□□□□ -0.11
SMPD4-209ENST00000439886 AEBP1Q8IUX7 1158 aa14.36□□□□□ -0.11
SMPD4-209ENST00000439886 NSD3Q9BZ95 1437 aa14.36□□□□□ -0.11
SMPD4-209ENST00000439886 KIF3BO15066 747 aa14.36□□□□□ -0.11
SMPD4-209ENST00000439886 E9PCH4 1651 aa14.36□□□□□ -0.11
SMPD4-209ENST00000439886 SNX21Q969T3 373 aa14.35□□□□□ -0.11
SMPD4-209ENST00000439886 THUMPD2Q9BTF0 503 aaKnown RBP14.35□□□□□ -0.11
SMPD4-209ENST00000439886 DISP1Q96F81 1524 aa14.35□□□□□ -0.11
SMPD4-209ENST00000439886 KIF16BQ96L93 1317 aa14.34□□□□□ -0.11
SMPD4-209ENST00000439886 IGSF3O75054 1194 aa14.34□□□□□ -0.11
SMPD4-209ENST00000439886 RBM25P49756 843 aaKnown RBP14.34□□□□□ -0.11
SMPD4-209ENST00000439886 SRPK2P78362 688 aaKnown RBP14.34□□□□□ -0.11
SMPD4-209ENST00000439886 HDAC1Q13547 482 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-209ENST00000439886 ZGPATQ8N5A5 531 aaKnown RBP14.34□□□□□ -0.11
SMPD4-209ENST00000439886 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
SMPD4-209ENST00000439886 NUCB2P80303 420 aa14.34□□□□□ -0.11
SMPD4-209ENST00000439886 NUCB1Q02818 461 aa14.34□□□□□ -0.11
SMPD4-209ENST00000439886 ADGBQ8N7X0 1667 aa14.34□□□□□ -0.11
SMPD4-209ENST00000439886 IRX3P78415 501 aaPredicted RBP14.33□□□□□ -0.11
SMPD4-209ENST00000439886 CERS3Q8IU89 383 aa14.33□□□□□ -0.11
SMPD4-209ENST00000439886 CNPY4Q8N129 248 aa14.33□□□□□ -0.11
SMPD4-209ENST00000439886 PLA2R1Q13018 1463 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 ADGRF5Q8IZF2 1346 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 CDC45O75419 566 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 KIAA2012Q0VF49 1180 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 PPP1R9BQ96SB3 815 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 CEP170Q5SW79 1584 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 MAGI1Q96QZ7 1491 aaPredicted RBP14.33□□□□□ -0.12
SMPD4-209ENST00000439886 HOMEZQ8IX15 550 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 AFAP1Q8N556 730 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 GDPD2Q9HCC8 539 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 CABP2Q9NPB3 220 aa14.33□□□□□ -0.12
SMPD4-209ENST00000439886 TRPM1Q7Z4N2 1603 aa14.32□□□□□ -0.12
SMPD4-209ENST00000439886 C14orf37Q86TY3 774 aa14.32□□□□□ -0.12
SMPD4-209ENST00000439886 TMPOP42166 694 aaKnown RBP14.32□□□□□ -0.12
SMPD4-209ENST00000439886 CSPP1Q1MSJ5 1256 aa14.32□□□□□ -0.12
SMPD4-209ENST00000439886 ZBTB22O15209 634 aa14.31□□□□□ -0.12
SMPD4-209ENST00000439886 ST18O60284 1047 aa14.31□□□□□ -0.12
SMPD4-209ENST00000439886 C17orf53Q8N3J3 647 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-209ENST00000439886 ZBTB40Q9NUA8 1239 aa14.31□□□□□ -0.12
SMPD4-209ENST00000439886 CCDC39Q9UFE4 941 aa14.31□□□□□ -0.12
SMPD4-209ENST00000439886 CASC1Q6TDU7 716 aa14.31□□□□□ -0.12
SMPD4-209ENST00000439886 C16orf71Q8IYS4 520 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-209ENST00000439886 ITSN2Q9NZM3 1697 aa14.3□□□□□ -0.12
SMPD4-209ENST00000439886 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
SMPD4-209ENST00000439886 APPP05067 770 aa14.3□□□□□ -0.12
SMPD4-209ENST00000439886 HMOX1P09601 288 aa14.3□□□□□ -0.12
SMPD4-209ENST00000439886 KIAA0556O60303 1618 aa14.3□□□□□ -0.12
SMPD4-209ENST00000439886 BMP2KLQ5H9B9 411 aa14.3□□□□□ -0.12
SMPD4-209ENST00000439886 ZKSCAN5Q9Y2L8 839 aa14.3□□□□□ -0.12
SMPD4-209ENST00000439886 CCDC141Q6ZP82 1450 aa14.3□□□□□ -0.12
SMPD4-209ENST00000439886 SCAF11Q99590 1463 aaKnown RBP14.29□□□□□ -0.12
SMPD4-209ENST00000439886 NOL7Q9UMY1 257 aaKnown RBP14.29□□□□□ -0.12
SMPD4-209ENST00000439886 SMARCA5O60264 1052 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-209ENST00000439886 FBLN1P23142 703 aa14.29□□□□□ -0.12
SMPD4-209ENST00000439886 DMTNQ08495 405 aa14.28□□□□□ -0.12
SMPD4-209ENST00000439886 SASS6Q6UVJ0 657 aa14.28□□□□□ -0.12
SMPD4-209ENST00000439886 CGNQ9P2M7 1197 aaKnown RBP14.28□□□□□ -0.12
SMPD4-209ENST00000439886 NEK4P51957 841 aa14.28□□□□□ -0.12
SMPD4-209ENST00000439886 SPAG9O60271 1321 aaKnown RBP14.28□□□□□ -0.12
SMPD4-209ENST00000439886 PRDM15P57071 1507 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-209ENST00000439886 RABEP1Q15276 862 aa14.28□□□□□ -0.12
SMPD4-209ENST00000439886 KIF2CQ99661 725 aa14.28□□□□□ -0.12
SMPD4-209ENST00000439886 LMBRD1Q9NUN5 540 aa14.28□□□□□ -0.12
SMPD4-209ENST00000439886 AK9Q5TCS8 1911 aa14.27□□□□□ -0.12
SMPD4-209ENST00000439886 ARHGAP5Q13017 1502 aa14.27□□□□□ -0.13
SMPD4-209ENST00000439886 NSFL1CQ9UNZ2 370 aaKnown RBP14.27□□□□□ -0.13
SMPD4-209ENST00000439886 TMEM63CQ9P1W3 806 aa14.26□□□□□ -0.13
SMPD4-209ENST00000439886 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-209ENST00000439886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMPD4-209ENST00000439886 ATAD2Q6PL18 1390 aa14.26□□□□□ -0.13
SMPD4-209ENST00000439886 DYNC1I1O14576 645 aa14.26□□□□□ -0.13
SMPD4-209ENST00000439886 TTC12Q9H892 705 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-209ENST00000439886 ATP10BO94823 1461 aa14.25□□□□□ -0.13
SMPD4-209ENST00000439886 PATL2C9JE40 543 aaKnown RBP14.25□□□□□ -0.13
SMPD4-209ENST00000439886 GPT2Q8TD30 523 aa14.25□□□□□ -0.13
SMPD4-209ENST00000439886 DTNBO60941 627 aa14.25□□□□□ -0.13
SMPD4-209ENST00000439886 EFCAB2Q5VUJ9 269 aa14.25□□□□□ -0.13
SMPD4-209ENST00000439886 USP25Q9UHP3 1055 aa14.25□□□□□ -0.13
SMPD4-209ENST00000439886 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
SMPD4-209ENST00000439886 PBRM1Q86U86 1689 aa14.25□□□□□ -0.13
SMPD4-209ENST00000439886 GCC1Q96CN9 775 aa14.25□□□□□ -0.13
SMPD4-209ENST00000439886 TSPY26PQ9H489 355 aa14.25□□□□□ -0.13
SMPD4-209ENST00000439886 DDIT3P35638 169 aa14.24□□□□□ -0.13
SMPD4-209ENST00000439886 OTUD7AQ8TE49 926 aaPredicted RBP14.24□□□□□ -0.13
SMPD4-209ENST00000439886 ABCC2Q92887 1545 aa14.24□□□□□ -0.13
SMPD4-209ENST00000439886 PTPRGP23470 1445 aa14.24□□□□□ -0.13
SMPD4-209ENST00000439886 SPC24Q8NBT2 197 aa14.24□□□□□ -0.13
SMPD4-209ENST00000439886 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
SMPD4-209ENST00000439886 INTS3Q68E01 1043 aaKnown RBP14.23□□□□□ -0.13
SMPD4-209ENST00000439886 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.23□□□□□ -0.134e-7■□□□□ 10.9
SMPD4-209ENST00000439886 ADAMTS12P58397 1594 aa14.23□□□□□ -0.13
SMPD4-209ENST00000439886 ZNF445P59923 1031 aa14.23□□□□□ -0.13
SMPD4-209ENST00000439886 UTP14CQ5TAP6 766 aaKnown RBP14.23□□□□□ -0.13
SMPD4-209ENST00000439886 GGT6Q6P531 493 aa14.23□□□□□ -0.13
SMPD4-209ENST00000439886 SLC4A10Q6U841 1118 aa14.23□□□□□ -0.13
SMPD4-209ENST00000439886 MTERF4Q7Z6M4 381 aaKnown RBP14.23□□□□□ -0.13
SMPD4-209ENST00000439886 TRIM6-TRIM34B2RNG4 842 aa14.23□□□□□ -0.13
SMPD4-209ENST00000439886 DIAPH1O60610 1272 aaKnown RBP14.23□□□□□ -0.13
SMPD4-209ENST00000439886 PRKAR2BP31323 418 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms