RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PNNQ9H307 717 aaKnown RBP13.53□□□□□ -0.24
CPNE1-218ENST00000439806 MYH16Q9H6N6 1097 aa13.53□□□□□ -0.24
CPNE1-218ENST00000439806 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
CPNE1-218ENST00000439806 PPIP5K1Q6PFW1 1433 aa13.53□□□□□ -0.24
CPNE1-218ENST00000439806 C3P01024 1663 aa13.53□□□□□ -0.24
CPNE1-218ENST00000439806 DIAPH1O60610 1272 aaKnown RBP13.52□□□□□ -0.25
CPNE1-218ENST00000439806 BCAR3O75815 825 aa13.52□□□□□ -0.25
CPNE1-218ENST00000439806 PHF23Q9BUL5 403 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-218ENST00000439806 EDC4Q6P2E9 1401 aaKnown RBP13.52□□□□□ -0.25
CPNE1-218ENST00000439806 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
CPNE1-218ENST00000439806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.51□□□□□ -0.25
CPNE1-218ENST00000439806 KDM2BQ8NHM5 1336 aa13.5□□□□□ -0.25
CPNE1-218ENST00000439806 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
CPNE1-218ENST00000439806 CPSF1Q10570 1443 aaKnown RBP13.49□□□□□ -0.25
CPNE1-218ENST00000439806 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
CPNE1-218ENST00000439806 TOPAZ1Q8N9V7 1692 aa13.48□□□□□ -0.25
CPNE1-218ENST00000439806 NEFMP07197 916 aa13.48□□□□□ -0.25
CPNE1-218ENST00000439806 TMPOP42166 694 aaKnown RBP13.48□□□□□ -0.25
CPNE1-218ENST00000439806 NUDT16Q96DE0 195 aaKnown RBP13.48□□□□□ -0.25
CPNE1-218ENST00000439806 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
CPNE1-218ENST00000439806 PNPLA6Q8IY17 1366 aa13.47□□□□□ -0.25
CPNE1-218ENST00000439806 PDE4AP27815 886 aa13.47□□□□□ -0.25
CPNE1-218ENST00000439806 RARSP54136 660 aaKnown RBP13.47□□□□□ -0.25
CPNE1-218ENST00000439806 PLEKHF1Q96S99 279 aa13.47□□□□□ -0.25
CPNE1-218ENST00000439806 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
CPNE1-218ENST00000439806 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-218ENST00000439806 FRAT1Q92837 279 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-218ENST00000439806 CDK12Q9NYV4 1490 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-218ENST00000439806 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-218ENST00000439806 CT47B1P0C2W7 299 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-218ENST00000439806 EID1Q9Y6B2 187 aa13.45□□□□□ -0.26
CPNE1-218ENST00000439806 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
CPNE1-218ENST00000439806 IL16Q14005 1332 aa13.44□□□□□ -0.26
CPNE1-218ENST00000439806 NME9Q86XW9 330 aa13.44□□□□□ -0.26
CPNE1-218ENST00000439806 COG3Q96JB2 828 aa13.44□□□□□ -0.26
CPNE1-218ENST00000439806 BACH2Q9BYV9 841 aa13.44□□□□□ -0.26
CPNE1-218ENST00000439806 POLKQ9UBT6 870 aa13.44□□□□□ -0.26
CPNE1-218ENST00000439806 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
CPNE1-218ENST00000439806 DIP2AQ14689 1571 aa13.44□□□□□ -0.26
CPNE1-218ENST00000439806 NRKQ7Z2Y5 1582 aa13.44□□□□□ -0.26
CPNE1-218ENST00000439806 ROBO2Q9HCK4 1378 aa13.44□□□□□ -0.26
CPNE1-218ENST00000439806 SLIT1O75093 1534 aa13.44□□□□□ -0.26
CPNE1-218ENST00000439806 VIRMAQ69YN4 1812 aaKnown RBP13.43□□□□□ -0.26
CPNE1-218ENST00000439806 FCHSD2O94868 740 aa13.43□□□□□ -0.26
CPNE1-218ENST00000439806 CEBPAP49715 358 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-218ENST00000439806 RIPK4P57078 832 aa13.43□□□□□ -0.26
CPNE1-218ENST00000439806 AAMPQ13685 434 aa13.43□□□□□ -0.26
CPNE1-218ENST00000439806 PANK1Q8TE04 598 aa13.43□□□□□ -0.26
CPNE1-218ENST00000439806 IPO9Q96P70 1041 aaKnown RBP13.43□□□□□ -0.26
CPNE1-218ENST00000439806 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-218ENST00000439806 COG6Q9Y2V7 657 aa13.43□□□□□ -0.26
CPNE1-218ENST00000439806 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
CPNE1-218ENST00000439806 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
CPNE1-218ENST00000439806 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
CPNE1-218ENST00000439806 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
CPNE1-218ENST00000439806 CLUAP1Q96AJ1 413 aa13.42□□□□□ -0.26
CPNE1-218ENST00000439806 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
CPNE1-218ENST00000439806 DLG5Q8TDM6 1919 aa13.42□□□□□ -0.26
CPNE1-218ENST00000439806 PRR36Q9H6K5 1346 aa13.41□□□□□ -0.26
CPNE1-218ENST00000439806 RIMS1Q86UR5 1692 aaKnown RBP13.41□□□□□ -0.26
CPNE1-218ENST00000439806 LTKP29376 864 aa13.41□□□□□ -0.26
CPNE1-218ENST00000439806 PRKAR2BP31323 418 aa13.41□□□□□ -0.26
CPNE1-218ENST00000439806 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
CPNE1-218ENST00000439806 BCL2L13Q9BXK5 485 aa13.41□□□□□ -0.26
CPNE1-218ENST00000439806 RSPH6AQ9H0K4 717 aa13.41□□□□□ -0.26
CPNE1-218ENST00000439806 EXOSC9Q06265 439 aaKnown RBP13.4□□□□□ -0.26
CPNE1-218ENST00000439806 ZKSCAN2Q63HK3 967 aa13.4□□□□□ -0.26
CPNE1-218ENST00000439806 SKAP1Q86WV1 359 aa13.4□□□□□ -0.26
CPNE1-218ENST00000439806 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-218ENST00000439806 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
CPNE1-218ENST00000439806 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
CPNE1-218ENST00000439806 PMFBP1Q8TBY8 1022 aa13.39□□□□□ -0.27
CPNE1-218ENST00000439806 ZRANB1Q9UGI0 708 aa13.39□□□□□ -0.27
CPNE1-218ENST00000439806 NALCNQ8IZF0 1738 aa13.39□□□□□ -0.27
CPNE1-218ENST00000439806 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
CPNE1-218ENST00000439806 FBLN1P23142 703 aa13.38□□□□□ -0.27
CPNE1-218ENST00000439806 RGS3P49796 1198 aa13.38□□□□□ -0.27
CPNE1-218ENST00000439806 CALD1Q05682 793 aaKnown RBP13.38□□□□□ -0.27
CPNE1-218ENST00000439806 NFE2L2Q16236 605 aa13.38□□□□□ -0.27
CPNE1-218ENST00000439806 SMC4Q9NTJ3 1288 aa13.38□□□□□ -0.27
CPNE1-218ENST00000439806 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-218ENST00000439806 XRN1Q8IZH2 1706 aaKnown RBP13.37□□□□□ -0.27
CPNE1-218ENST00000439806 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
CPNE1-218ENST00000439806 HMOX1P09601 288 aa13.37□□□□□ -0.27
CPNE1-218ENST00000439806 IL13P35225 146 aa13.37□□□□□ -0.27
CPNE1-218ENST00000439806 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
CPNE1-218ENST00000439806 FTSJ3Q8IY81 847 aaKnown RBP13.37□□□□□ -0.27
CPNE1-218ENST00000439806 THEMISQ8N1K5 641 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-218ENST00000439806 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
CPNE1-218ENST00000439806 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
CPNE1-218ENST00000439806 TTC21BQ7Z4L5 1316 aa13.37□□□□□ -0.27
CPNE1-218ENST00000439806 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
CPNE1-218ENST00000439806 IGHDP01880 384 aa13.36□□□□□ -0.27
CPNE1-218ENST00000439806 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
CPNE1-218ENST00000439806 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
CPNE1-218ENST00000439806 TNNQ9UQP3 1299 aa13.36□□□□□ -0.27
CPNE1-218ENST00000439806 TBX22Q9Y458 520 aa13.36□□□□□ -0.27
CPNE1-218ENST00000439806 USP6P35125 1406 aa13.36□□□□□ -0.27
CPNE1-218ENST00000439806 ACEP12821 1306 aa13.36□□□□□ -0.27
CPNE1-218ENST00000439806 RLBP1P12271 317 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms