RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SRPK2P78362 688 aaKnown RBP25.03■■□□□ 1.6
CCDC188-201ENST00000439765 GLI3P10071 1580 aa25.02■■□□□ 1.6
CCDC188-201ENST00000439765 CABP2Q9NPB3 220 aa25.01■■□□□ 1.59
CCDC188-201ENST00000439765 SBNO2Q9Y2G9 1366 aa25■■□□□ 1.59
CCDC188-201ENST00000439765 EVC2Q86UK5 1308 aa25■■□□□ 1.59
CCDC188-201ENST00000439765 UNC5CLQ8IV45 518 aa24.99■■□□□ 1.59
CCDC188-201ENST00000439765 CABLES1Q8TDN4 633 aa24.99■■□□□ 1.59
CCDC188-201ENST00000439765 BRWD3Q6RI45 1802 aa24.99■■□□□ 1.59
CCDC188-201ENST00000439765 NRAPQ86VF7 1730 aa24.99■■□□□ 1.59
CCDC188-201ENST00000439765 USP47Q96K76 1375 aa24.98■■□□□ 1.59
CCDC188-201ENST00000439765 HAP1P54257 671 aaPredicted RBP24.98■■□□□ 1.59
CCDC188-201ENST00000439765 PPIP5K1Q6PFW1 1433 aa24.98■■□□□ 1.59
CCDC188-201ENST00000439765 GJD4Q96KN9 370 aaPredicted RBP24.98■■□□□ 1.59
CCDC188-201ENST00000439765 ATAD2Q6PL18 1390 aa24.98■■□□□ 1.59
CCDC188-201ENST00000439765 ZEB1P37275 1124 aaPredicted RBP24.97■■□□□ 1.59
CCDC188-201ENST00000439765 LMOD2Q6P5Q4 547 aa24.97■■□□□ 1.59
CCDC188-201ENST00000439765 NGDNQ8NEJ9 315 aaKnown RBP24.96■■□□□ 1.59
CCDC188-201ENST00000439765 COL14A1Q05707 1796 aaKnown RBP24.96■■□□□ 1.59
CCDC188-201ENST00000439765 CCDC61Q9Y6R9 512 aa24.96■■□□□ 1.59
CCDC188-201ENST00000439765 EP400Q96L91 3159 aa24.95■■□□□ 1.58
CCDC188-201ENST00000439765 PHRF1Q9P1Y6 1649 aaKnown RBP24.93■■□□□ 1.58
CCDC188-201ENST00000439765 AKAP12Q02952 1782 aa24.93■■□□□ 1.58
CCDC188-201ENST00000439765 ST20-MTHFSA0A0A6YYL1 179 aa24.93■■□□□ 1.58
CCDC188-201ENST00000439765 POLR3AO14802 1390 aaPredicted RBP24.92■■□□□ 1.58
CCDC188-201ENST00000439765 ACEP12821 1306 aa24.91■■□□□ 1.58
CCDC188-201ENST00000439765 PLEKHG5O94827 1062 aa24.89■■□□□ 1.57
CCDC188-201ENST00000439765 VPS72Q15906 364 aa24.89■■□□□ 1.57
CCDC188-201ENST00000439765 PLEKHG3A1L390 1219 aa24.88■■□□□ 1.57
CCDC188-201ENST00000439765 TESK2Q96S53 571 aa24.88■■□□□ 1.57
CCDC188-201ENST00000439765 FAM83GA6ND36 823 aa24.87■■□□□ 1.57
CCDC188-201ENST00000439765 CABP1Q9NZU7 370 aa24.87■■□□□ 1.57
CCDC188-201ENST00000439765 MON2Q7Z3U7 1717 aa24.87■■□□□ 1.57
CCDC188-201ENST00000439765 PAK3O75914 559 aaPredicted RBP24.86■■□□□ 1.57
CCDC188-201ENST00000439765 NRKQ7Z2Y5 1582 aa24.86■■□□□ 1.57
CCDC188-201ENST00000439765 USP6P35125 1406 aa24.83■■□□□ 1.56
CCDC188-201ENST00000439765 ONECUT3O60422 494 aaPredicted RBP24.82■■□□□ 1.56
CCDC188-201ENST00000439765 PIK3C2AO00443 1686 aa24.81■■□□□ 1.56
CCDC188-201ENST00000439765 BTG4Q9NY30 223 aa24.8■■□□□ 1.56
CCDC188-201ENST00000439765 CCDC125Q86Z20 511 aa24.79■■□□□ 1.56
CCDC188-201ENST00000439765 SEPT12Q8IYM1 358 aa24.77■■□□□ 1.56
CCDC188-201ENST00000439765 CCDC9Q9Y3X0 531 aaKnown RBP24.77■■□□□ 1.56
CCDC188-201ENST00000439765 MYOM1P52179 1685 aa24.77■■□□□ 1.56
CCDC188-201ENST00000439765 CD163L1Q9NR16 1453 aa24.77■■□□□ 1.56
CCDC188-201ENST00000439765 BRD4O60885 1362 aaPredicted RBP24.77■■□□□ 1.56
CCDC188-201ENST00000439765 TMC1Q8TDI8 760 aa24.77■■□□□ 1.56
CCDC188-201ENST00000439765 PRDM11Q9NQV5 511 aa24.77■■□□□ 1.56
CCDC188-201ENST00000439765 CPSF1Q10570 1443 aaKnown RBP24.76■■□□□ 1.55
CCDC188-201ENST00000439765 TMF1P82094 1093 aa24.76■■□□□ 1.55
CCDC188-201ENST00000439765 NUTM2GQ5VZR2 741 aa24.76■■□□□ 1.55
CCDC188-201ENST00000439765 THSD7AQ9UPZ6 1657 aa24.75■■□□□ 1.55
CCDC188-201ENST00000439765 KIAA0232Q92628 1395 aa24.75■■□□□ 1.55
CCDC188-201ENST00000439765 LMO7Q8WWI1 1683 aa24.74■■□□□ 1.55
CCDC188-201ENST00000439765 KTN1Q86UP2 1357 aaKnown RBP24.74■■□□□ 1.55
CCDC188-201ENST00000439765 BLMP54132 1417 aaPredicted RBP24.73■■□□□ 1.55
CCDC188-201ENST00000439765 SLC24A1O60721 1099 aa24.73■■□□□ 1.55
CCDC188-201ENST00000439765 USP19O94966 1318 aa24.73■■□□□ 1.55
CCDC188-201ENST00000439765 SSH2Q76I76 1423 aa24.73■■□□□ 1.55
CCDC188-201ENST00000439765 EIF4G2P78344 907 aaKnown RBP eCLIP24.72■■□□□ 1.55
CCDC188-201ENST00000439765 ABTB2Q8N961 1025 aa24.72■■□□□ 1.55
CCDC188-201ENST00000439765 SLC12A5Q9H2X9 1139 aa24.72■■□□□ 1.55
CCDC188-201ENST00000439765 SPATA31A5Q5VU36 1347 aa24.71■■□□□ 1.55
CCDC188-201ENST00000439765 SPATA31A7Q8IWB4 1347 aa24.71■■□□□ 1.55
CCDC188-201ENST00000439765 HSPA5P11021 654 aaKnown RBP24.7■■□□□ 1.55
CCDC188-201ENST00000439765 PUS7Q96PZ0 661 aaKnown RBP24.7■■□□□ 1.55
CCDC188-201ENST00000439765 A0A1W2PP64 1363 aa24.7■■□□□ 1.55
CCDC188-201ENST00000439765 CPDO75976 1380 aa24.7■■□□□ 1.54
CCDC188-201ENST00000439765 NINLQ9Y2I6 1382 aa24.7■■□□□ 1.54
CCDC188-201ENST00000439765 KRT27Q7Z3Y8 459 aa24.69■■□□□ 1.54
CCDC188-201ENST00000439765 FAM98CQ17RN3 349 aaKnown RBP24.68■■□□□ 1.54
CCDC188-201ENST00000439765 ZNF692Q9BU19 519 aaPredicted RBP24.68■■□□□ 1.54
CCDC188-201ENST00000439765 CAMTA1Q9Y6Y1 1673 aa24.67■■□□□ 1.54
CCDC188-201ENST00000439765 SLIT3O75094 1523 aa24.67■■□□□ 1.54
CCDC188-201ENST00000439765 TTC21BQ7Z4L5 1316 aa24.66■■□□□ 1.54
CCDC188-201ENST00000439765 RGPD1P0DJD0 1748 aa24.66■■□□□ 1.54
CCDC188-201ENST00000439765 ZC3H6P61129 1189 aaKnown RBP24.66■■□□□ 1.54
CCDC188-201ENST00000439765 CHRNA2Q15822 529 aa24.66■■□□□ 1.54
CCDC188-201ENST00000439765 NLRP13Q86W25 1043 aa24.66■■□□□ 1.54
CCDC188-201ENST00000439765 USP54Q70EL1 1684 aa24.66■■□□□ 1.54
CCDC188-201ENST00000439765 HDGFL2Q7Z4V5 671 aaPredicted RBP24.65■■□□□ 1.54
CCDC188-201ENST00000439765 TERF2IPQ9NYB0 399 aa24.65■■□□□ 1.54
CCDC188-201ENST00000439765 CDCA8Q53HL2 280 aa24.64■■□□□ 1.54
CCDC188-201ENST00000439765 EDC4Q6P2E9 1401 aaKnown RBP24.64■■□□□ 1.54
CCDC188-201ENST00000439765 SPATA31A1Q5TZJ5 1347 aa24.64■■□□□ 1.53
CCDC188-201ENST00000439765 A0A0G2JS52 829 aa24.64■■□□□ 1.53
CCDC188-201ENST00000439765 MYT1Q01538 1121 aa24.64■■□□□ 1.53
CCDC188-201ENST00000439765 TTC21AQ8NDW8 1320 aa24.63■■□□□ 1.53
CCDC188-201ENST00000439765 NLRP6P59044 892 aa24.63■■□□□ 1.53
CCDC188-201ENST00000439765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.63■■□□□ 1.53
CCDC188-201ENST00000439765 ANKRD36BQ8N2N9 1353 aa24.62■■□□□ 1.53
CCDC188-201ENST00000439765 KIF20BQ96Q89 1820 aa24.62■■□□□ 1.53
CCDC188-201ENST00000439765 COL18A1P39060 1754 aa24.61■■□□□ 1.53
CCDC188-201ENST00000439765 GCP02774 474 aa24.61■■□□□ 1.53
CCDC188-201ENST00000439765 TNS1Q9HBL0 1735 aaKnown RBP24.6■■□□□ 1.53
CCDC188-201ENST00000439765 POLR3GLQ9BT43 218 aa24.6■■□□□ 1.53
CCDC188-201ENST00000439765 STRN4Q9NRL3 753 aa24.6■■□□□ 1.53
CCDC188-201ENST00000439765 LTN1O94822 1766 aa24.58■■□□□ 1.52
CCDC188-201ENST00000439765 RGPD5Q99666 1765 aa24.58■■□□□ 1.52
CCDC188-201ENST00000439765 COL5A2P05997 1499 aaPredicted RBP24.58■■□□□ 1.52
CCDC188-201ENST00000439765 SF3B2Q13435 895 aaKnown RBP24.58■■□□□ 1.52
CCDC188-201ENST00000439765 NME9Q86XW9 330 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms