RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 HDGFL2Q7Z4V5 671 aaPredicted RBP19.53■□□□□ 0.72
DHFR-201ENST00000439211 LNPKQ9C0E8 428 aa19.53■□□□□ 0.72
DHFR-201ENST00000439211 MVPQ14764 893 aaKnown RBP19.52■□□□□ 0.72
DHFR-201ENST00000439211 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
DHFR-201ENST00000439211 C22orf23Q9BZE7 217 aa19.52■□□□□ 0.72
DHFR-201ENST00000439211 ESF1Q9H501 851 aaKnown RBP19.52■□□□□ 0.72
DHFR-201ENST00000439211 DYNC1I1O14576 645 aa19.51■□□□□ 0.71
DHFR-201ENST00000439211 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
DHFR-201ENST00000439211 ATP10AO60312 1499 aa19.51■□□□□ 0.71
DHFR-201ENST00000439211 IGSF3O75054 1194 aa19.5■□□□□ 0.71
DHFR-201ENST00000439211 NOB1Q9ULX3 412 aaKnown RBP19.5■□□□□ 0.71
DHFR-201ENST00000439211 DIAPH1O60610 1272 aaKnown RBP19.49■□□□□ 0.71
DHFR-201ENST00000439211 DMTNQ08495 405 aa19.49■□□□□ 0.71
DHFR-201ENST00000439211 CCDC94Q9BW85 323 aaPredicted RBP19.49■□□□□ 0.71
DHFR-201ENST00000439211 APBB1O00213 710 aa19.48■□□□□ 0.71
DHFR-201ENST00000439211 HMOX1P09601 288 aa19.48■□□□□ 0.71
DHFR-201ENST00000439211 IPO4Q8TEX9 1081 aaKnown RBP19.48■□□□□ 0.71
DHFR-201ENST00000439211 CYB5RLQ6IPT4 315 aa19.48■□□□□ 0.71
DHFR-201ENST00000439211 CHMP4AQ9BY43 222 aa19.48■□□□□ 0.71
DHFR-201ENST00000439211 NPC1L1Q9UHC9 1359 aa19.48■□□□□ 0.71
DHFR-201ENST00000439211 ANKRD45Q5TZF3 282 aa19.48■□□□□ 0.71
DHFR-201ENST00000439211 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
DHFR-201ENST00000439211 C14orf93Q9H972 538 aaKnown RBP19.47■□□□□ 0.71
DHFR-201ENST00000439211 NINLQ9Y2I6 1382 aa19.47■□□□□ 0.71
DHFR-201ENST00000439211 POLR3AO14802 1390 aaPredicted RBP19.47■□□□□ 0.71
DHFR-201ENST00000439211 SOX12O15370 315 aa19.47■□□□□ 0.71
DHFR-201ENST00000439211 PTMSP20962 102 aa19.47■□□□□ 0.71
DHFR-201ENST00000439211 TMPOP42166 694 aaKnown RBP19.46■□□□□ 0.71
DHFR-201ENST00000439211 PRAM1Q96QH2 718 aa19.45■□□□□ 0.7
DHFR-201ENST00000439211 UGGT1Q9NYU2 1555 aa19.45■□□□□ 0.7
DHFR-201ENST00000439211 MYO5CQ9NQX4 1742 aa19.45■□□□□ 0.7
DHFR-201ENST00000439211 ATF7IPQ6VMQ6 1270 aa19.45■□□□□ 0.7
DHFR-201ENST00000439211 GAS2L3Q86XJ1 694 aa19.45■□□□□ 0.7
DHFR-201ENST00000439211 E9PCH4 1651 aa19.45■□□□□ 0.7
DHFR-201ENST00000439211 IQGAP3Q86VI3 1631 aa19.44■□□□□ 0.7
DHFR-201ENST00000439211 TRIM27P14373 513 aa19.44■□□□□ 0.7
DHFR-201ENST00000439211 SASS6Q6UVJ0 657 aa19.44■□□□□ 0.7
DHFR-201ENST00000439211 C1orf115Q9H7X2 142 aa19.44■□□□□ 0.7
DHFR-201ENST00000439211 UNC13BO14795 1591 aa19.44■□□□□ 0.7
DHFR-201ENST00000439211 FBLN1P23142 703 aa19.44■□□□□ 0.7
DHFR-201ENST00000439211 TMEM57Q8N5G2 664 aa19.44■□□□□ 0.7
DHFR-201ENST00000439211 ANTXR1Q9H6X2 564 aa19.44■□□□□ 0.7
DHFR-201ENST00000439211 SPDYE4A6NLX3 237 aa19.43■□□□□ 0.7
DHFR-201ENST00000439211 KIF20AO95235 890 aa19.43■□□□□ 0.7
DHFR-201ENST00000439211 CFAP65Q6ZU64 1925 aaKnown RBP19.43■□□□□ 0.7
DHFR-201ENST00000439211 ASXL2Q76L83 1435 aa19.43■□□□□ 0.7
DHFR-201ENST00000439211 LETM1O95202 739 aaPredicted RBP19.43■□□□□ 0.7
DHFR-201ENST00000439211 TERF1P54274 439 aa19.43■□□□□ 0.7
DHFR-201ENST00000439211 KIAA2012Q0VF49 1180 aa19.42■□□□□ 0.7
DHFR-201ENST00000439211 UTP14CQ5TAP6 766 aaKnown RBP19.42■□□□□ 0.7
DHFR-201ENST00000439211 GTPBP4Q9BZE4 634 aaKnown RBP19.42■□□□□ 0.7
DHFR-201ENST00000439211 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
DHFR-201ENST00000439211 ERVK-7P63135 1459 aa19.41■□□□□ 0.7
DHFR-201ENST00000439211 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
DHFR-201ENST00000439211 TBC1D32Q96NH3 1257 aa19.41■□□□□ 0.7
DHFR-201ENST00000439211 CABP1Q9NZU7 370 aa19.4■□□□□ 0.7
DHFR-201ENST00000439211 RTEL1-TNFRSF6BF6WH68 1400 aa19.4■□□□□ 0.7
DHFR-201ENST00000439211 CD109Q6YHK3 1445 aa19.4■□□□□ 0.7
DHFR-201ENST00000439211 AEBP1Q8IUX7 1158 aa19.4■□□□□ 0.7
DHFR-201ENST00000439211 PLCB2Q00722 1185 aa19.39■□□□□ 0.7
DHFR-201ENST00000439211 MPNDQ8N594 471 aa19.39■□□□□ 0.7
DHFR-201ENST00000439211 CHAF1AQ13111 956 aaPredicted RBP19.39■□□□□ 0.69
DHFR-201ENST00000439211 IDI1Q13907 227 aa19.39■□□□□ 0.69
DHFR-201ENST00000439211 TNPO1Q92973 898 aaKnown RBP19.38■□□□□ 0.69
DHFR-201ENST00000439211 KIF16BQ96L93 1317 aa19.38■□□□□ 0.69
DHFR-201ENST00000439211 TAF3Q5VWG9 929 aa19.38■□□□□ 0.69
DHFR-201ENST00000439211 CAVIN1Q6NZI2 390 aaKnown RBP19.38■□□□□ 0.69
DHFR-201ENST00000439211 SYNMO15061 1565 aa19.38■□□□□ 0.69
DHFR-201ENST00000439211 TNNT3P45378 269 aaPredicted RBP19.37■□□□□ 0.69
DHFR-201ENST00000439211 PTPRTO14522 1441 aa19.37■□□□□ 0.69
DHFR-201ENST00000439211 NUTM2FA1L443 756 aa19.37■□□□□ 0.69
DHFR-201ENST00000439211 PLXNC1O60486 1568 aa19.37■□□□□ 0.69
DHFR-201ENST00000439211 ZCCHC11Q5TAX3 1644 aaKnown RBP19.36■□□□□ 0.69
DHFR-201ENST00000439211 TRPM2O94759 1503 aa19.36■□□□□ 0.69
DHFR-201ENST00000439211 KCNJ4P48050 445 aa19.35■□□□□ 0.69
DHFR-201ENST00000439211 TSC1Q92574 1164 aa19.35■□□□□ 0.69
DHFR-201ENST00000439211 TPRNQ4KMQ1 711 aa19.35■□□□□ 0.69
DHFR-201ENST00000439211 RNF214Q8ND24 703 aa19.35■□□□□ 0.69
DHFR-201ENST00000439211 ABCC1P33527 1531 aa19.35■□□□□ 0.69
DHFR-201ENST00000439211 CDK19Q9BWU1 502 aa19.34■□□□□ 0.69
DHFR-201ENST00000439211 USP19O94966 1318 aa19.34■□□□□ 0.69
DHFR-201ENST00000439211 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
DHFR-201ENST00000439211 CCDC39Q9UFE4 941 aa19.34■□□□□ 0.69
DHFR-201ENST00000439211 ATP7AQ04656 1500 aa19.34■□□□□ 0.69
DHFR-201ENST00000439211 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.69
DHFR-201ENST00000439211 FAM177BA6PVY3 158 aa19.33■□□□□ 0.69
DHFR-201ENST00000439211 MADDQ8WXG6 1647 aa19.33■□□□□ 0.68
DHFR-201ENST00000439211 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
DHFR-201ENST00000439211 CLTCL1P53675 1640 aa19.32■□□□□ 0.68
DHFR-201ENST00000439211 FYB1O15117 783 aa19.32■□□□□ 0.68
DHFR-201ENST00000439211 ZSCAN20P17040 1043 aaPredicted RBP19.32■□□□□ 0.68
DHFR-201ENST00000439211 ZBTB22O15209 634 aa19.32■□□□□ 0.68
DHFR-201ENST00000439211 CT47B1P0C2W7 299 aaPredicted RBP19.32■□□□□ 0.68
DHFR-201ENST00000439211 MCTP1Q6DN14 999 aa19.32■□□□□ 0.68
DHFR-201ENST00000439211 PDCL2Q8N4E4 241 aa19.31■□□□□ 0.68
DHFR-201ENST00000439211 FAM69CQ0P6D2 419 aa19.31■□□□□ 0.68
DHFR-201ENST00000439211 HMGN5P82970 282 aaKnown RBP19.3■□□□□ 0.68
DHFR-201ENST00000439211 CHD1LQ86WJ1 897 aa19.3■□□□□ 0.68
DHFR-201ENST00000439211 LAMC1P11047 1609 aa19.3■□□□□ 0.68
DHFR-201ENST00000439211 ANKRD36BQ8N2N9 1353 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms