RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TTLL12Q14166 644 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P12-201ENST00000438594 ARID5BQ14865 1188 aa6.85□□□□□ -1.31
HMGB1P12-201ENST00000438594 ZNF511Q8NB15 262 aa6.85□□□□□ -1.31
HMGB1P12-201ENST00000438594 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
HMGB1P12-201ENST00000438594 MOXD2PA6NHM9 499 aa6.84□□□□□ -1.31
HMGB1P12-201ENST00000438594 KDM2AQ9Y2K7 1162 aa6.84□□□□□ -1.31
HMGB1P12-201ENST00000438594 ADH1CP00326 375 aa6.83□□□□□ -1.32
HMGB1P12-201ENST00000438594 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P12-201ENST00000438594 MTMR2Q13614 643 aa6.83□□□□□ -1.32
HMGB1P12-201ENST00000438594 C6orf118Q5T5N4 469 aa6.83□□□□□ -1.32
HMGB1P12-201ENST00000438594 TIMP2P16035 220 aa6.82□□□□□ -1.32
HMGB1P12-201ENST00000438594 AGERQ15109 404 aa6.82□□□□□ -1.32
HMGB1P12-201ENST00000438594 FAM174AQ8TBP5 190 aa6.82□□□□□ -1.32
HMGB1P12-201ENST00000438594 MAN1A2O60476 641 aa6.81□□□□□ -1.32
HMGB1P12-201ENST00000438594 ARXQ96QS3 562 aa6.81□□□□□ -1.32
HMGB1P12-201ENST00000438594 ZIC2O95409 532 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P12-201ENST00000438594 SPDYE5A6NIY4 337 aa6.79□□□□□ -1.32
HMGB1P12-201ENST00000438594 FOXJ1Q92949 421 aa6.79□□□□□ -1.32
HMGB1P12-201ENST00000438594 ZFAND3Q9H8U3 227 aa6.79□□□□□ -1.32
HMGB1P12-201ENST00000438594 UPP2O95045 317 aa6.78□□□□□ -1.32
HMGB1P12-201ENST00000438594 BMP2P12643 396 aa6.78□□□□□ -1.32
HMGB1P12-201ENST00000438594 TSC1Q92574 1164 aa6.78□□□□□ -1.32
HMGB1P12-201ENST00000438594 DESI1Q6ICB0 168 aa6.77□□□□□ -1.33
HMGB1P12-201ENST00000438594 MPNDQ8N594 471 aa6.77□□□□□ -1.33
HMGB1P12-201ENST00000438594 ITPKCQ96DU7 683 aa6.77□□□□□ -1.33
HMGB1P12-201ENST00000438594 BEGAINQ9BUH8 593 aa6.77□□□□□ -1.33
HMGB1P12-201ENST00000438594 MAP10Q9P2G4 905 aa6.77□□□□□ -1.33
HMGB1P12-201ENST00000438594 CSPP1Q1MSJ5 1256 aa6.76□□□□□ -1.33
HMGB1P12-201ENST00000438594 LYPD8Q6UX82 237 aa6.76□□□□□ -1.33
HMGB1P12-201ENST00000438594 GIGYF2Q6Y7W6 1299 aaKnown RBP6.76□□□□□ -1.33
HMGB1P12-201ENST00000438594 TIMELESSQ9UNS1 1208 aa6.76□□□□□ -1.33
HMGB1P12-201ENST00000438594 BCANQ96GW7 911 aa6.75□□□□□ -1.33
HMGB1P12-201ENST00000438594 TBC1D2Q9BYX2 928 aa6.75□□□□□ -1.33
HMGB1P12-201ENST00000438594 PCDHB15Q9Y5E8 787 aa6.75□□□□□ -1.33
HMGB1P12-201ENST00000438594 CFAP99D6REC4 459 aa6.74□□□□□ -1.33
HMGB1P12-201ENST00000438594 PPFIA3O75145 1194 aa6.74□□□□□ -1.33
HMGB1P12-201ENST00000438594 KLF16Q9BXK1 252 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P12-201ENST00000438594 NR3C2P08235 984 aa6.73□□□□□ -1.33
HMGB1P12-201ENST00000438594 VSIG8P0DPA2 414 aa6.73□□□□□ -1.33
HMGB1P12-201ENST00000438594 HRCP23327 699 aa6.73□□□□□ -1.33
HMGB1P12-201ENST00000438594 NR5A1Q13285 461 aa6.73□□□□□ -1.33
HMGB1P12-201ENST00000438594 RSBN1LQ6PCB5 846 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P12-201ENST00000438594 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMGB1P12-201ENST00000438594 LINC00528Q8N1L1 170 aa6.73□□□□□ -1.33
HMGB1P12-201ENST00000438594 CDK15Q96Q40 435 aa6.73□□□□□ -1.33
HMGB1P12-201ENST00000438594 ZBTB3Q9H5J0 574 aa6.73□□□□□ -1.33
HMGB1P12-201ENST00000438594 DIXDC1Q155Q3 683 aa6.72□□□□□ -1.33
HMGB1P12-201ENST00000438594 BPHLQ86WA6 291 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P12-201ENST00000438594 KCTD17Q8N5Z5 321 aa6.72□□□□□ -1.33
HMGB1P12-201ENST00000438594 CABLES1Q8TDN4 633 aa6.72□□□□□ -1.33
HMGB1P12-201ENST00000438594 SPTLC1O15269 473 aa6.71□□□□□ -1.34
HMGB1P12-201ENST00000438594 FSHRP23945 695 aa6.71□□□□□ -1.34
HMGB1P12-201ENST00000438594 AMHR2Q16671 573 aa6.71□□□□□ -1.34
HMGB1P12-201ENST00000438594 VSIG10Q8N0Z9 540 aa6.71□□□□□ -1.34
HMGB1P12-201ENST00000438594 NUTM2BA6NNL0 878 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 NUTM2EB1AL46 878 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 F12P00748 615 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 NUTM2DQ5VT03 806 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 BARGINQ6ZT62 677 aa6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 VASH1Q7L8A9 365 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 RIC3Q7Z5B4 369 aa6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 NUTM2AQ8IVF1 878 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 CNTNAP3BQ96NU0 1288 aa6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 CNTNAP3Q9BZ76 1288 aa6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 DNMT3LQ9UJW3 386 aa6.7□□□□□ -1.34
HMGB1P12-201ENST00000438594 MAGEB6P1A0A0J9YX57 407 aa6.69□□□□□ -1.34
HMGB1P12-201ENST00000438594 PER1O15534 1290 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P12-201ENST00000438594 GJA5P36382 358 aa6.69□□□□□ -1.34
HMGB1P12-201ENST00000438594 GRM5P41594 1212 aa6.69□□□□□ -1.34
HMGB1P12-201ENST00000438594 SUZ12Q15022 739 aaKnown RBP6.69□□□□□ -1.34
HMGB1P12-201ENST00000438594 MEIOBQ8N635 442 aa6.69□□□□□ -1.34
HMGB1P12-201ENST00000438594 FIGNL2A6NMB9 653 aa6.68□□□□□ -1.34
HMGB1P12-201ENST00000438594 KCNMA1Q12791 1236 aa6.68□□□□□ -1.34
HMGB1P12-201ENST00000438594 TMEM151AQ8N4L1 468 aa6.68□□□□□ -1.34
HMGB1P12-201ENST00000438594 CARD14Q9BXL6 1004 aa6.68□□□□□ -1.34
HMGB1P12-201ENST00000438594 SOS2Q07890 1332 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P12-201ENST00000438594 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
HMGB1P12-201ENST00000438594 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.67□□□□□ -1.34
HMGB1P12-201ENST00000438594 ARMC2Q8NEN0 867 aa6.67□□□□□ -1.34
HMGB1P12-201ENST00000438594 TSEN34Q9BSV6 310 aaKnown RBP6.67□□□□□ -1.34
HMGB1P12-201ENST00000438594 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
HMGB1P12-201ENST00000438594 TTLL8A6PVC2 850 aa6.66□□□□□ -1.34
HMGB1P12-201ENST00000438594 ZMYND10O75800 440 aa6.66□□□□□ -1.34
HMGB1P12-201ENST00000438594 GDF11O95390 407 aa6.66□□□□□ -1.34
HMGB1P12-201ENST00000438594 TPRNQ4KMQ1 711 aa6.66□□□□□ -1.34
HMGB1P12-201ENST00000438594 PRPF38BQ5VTL8 546 aaKnown RBP6.66□□□□□ -1.34
HMGB1P12-201ENST00000438594 PARP9Q8IXQ6 854 aa6.66□□□□□ -1.34
HMGB1P12-201ENST00000438594 CCDC116Q8IYX3 515 aa6.66□□□□□ -1.34
HMGB1P12-201ENST00000438594 GPR161Q8N6U8 529 aaKnown RBP6.66□□□□□ -1.34
HMGB1P12-201ENST00000438594 RNF225M0QZC1 329 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P12-201ENST00000438594 PTSQ03393 145 aa6.65□□□□□ -1.34
HMGB1P12-201ENST00000438594 NBPF14Q5TI25 921 aa6.65□□□□□ -1.34
HMGB1P12-201ENST00000438594 ZC3H15Q8WU90 426 aaKnown RBP6.65□□□□□ -1.34
HMGB1P12-201ENST00000438594 EMILIN1Q9Y6C2 1016 aa6.65□□□□□ -1.34
HMGB1P12-201ENST00000438594 KRT76Q01546 638 aa6.64□□□□□ -1.35
HMGB1P12-201ENST00000438594 RASSF7Q02833 373 aa6.64□□□□□ -1.35
HMGB1P12-201ENST00000438594 SVOPQ8N4V2 548 aa6.64□□□□□ -1.35
HMGB1P12-201ENST00000438594 COL25A1Q9BXS0 654 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P12-201ENST00000438594 ADAMTS8Q9UP79 889 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms