RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 ALS2Q96Q42 1657 aa25.31■■□□□ 1.64
HDAC6-208ENST00000438518 FBXO41Q8TF61 875 aa25.3■■□□□ 1.64
HDAC6-208ENST00000438518 KIF20BQ96Q89 1820 aa25.3■■□□□ 1.64
HDAC6-208ENST00000438518 USP54Q70EL1 1684 aa25.29■■□□□ 1.64
HDAC6-208ENST00000438518 TNS3Q68CZ2 1445 aa25.29■■□□□ 1.64
HDAC6-208ENST00000438518 NSD3Q9BZ95 1437 aa25.29■■□□□ 1.64
HDAC6-208ENST00000438518 TTC21BQ7Z4L5 1316 aa25.27■■□□□ 1.64
HDAC6-208ENST00000438518 LRRC59Q96AG4 307 aaKnown RBP25.26■■□□□ 1.63
HDAC6-208ENST00000438518 ARHGEF10O15013 1369 aa25.26■■□□□ 1.63
HDAC6-208ENST00000438518 PIK3C2AO00443 1686 aa25.26■■□□□ 1.63
HDAC6-208ENST00000438518 SPATA31A3Q5VYP0 1347 aa25.25■■□□□ 1.63
HDAC6-208ENST00000438518 NSD2O96028 1365 aa25.25■■□□□ 1.63
HDAC6-208ENST00000438518 ANKRD26Q9UPS8 1709 aa25.25■■□□□ 1.63
HDAC6-208ENST00000438518 CGNL1Q0VF96 1302 aa25.24■■□□□ 1.63
HDAC6-208ENST00000438518 DDX10Q13206 875 aaKnown RBP25.24■■□□□ 1.63
HDAC6-208ENST00000438518 DDX17Q92841 729 aaKnown RBP25.24■■□□□ 1.63
HDAC6-208ENST00000438518 CARD14Q9BXL6 1004 aa25.24■■□□□ 1.63
HDAC6-208ENST00000438518 KNSTRNQ9Y448 316 aa25.24■■□□□ 1.63
HDAC6-208ENST00000438518 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
HDAC6-208ENST00000438518 COL22A1Q8NFW1 1626 aaPredicted RBP25.23■■□□□ 1.63
HDAC6-208ENST00000438518 PER1O15534 1290 aaPredicted RBP25.23■■□□□ 1.63
HDAC6-208ENST00000438518 MED1Q15648 1581 aaPredicted RBP25.22■■□□□ 1.63
HDAC6-208ENST00000438518 NPC1L1Q9UHC9 1359 aa25.22■■□□□ 1.63
HDAC6-208ENST00000438518 PAK3O75914 559 aaPredicted RBP25.22■■□□□ 1.63
HDAC6-208ENST00000438518 XPCQ01831 940 aaPredicted RBP25.22■■□□□ 1.63
HDAC6-208ENST00000438518 USP31Q70CQ4 1352 aa25.2■■□□□ 1.63
HDAC6-208ENST00000438518 ABTB2Q8N961 1025 aa25.19■■□□□ 1.62
HDAC6-208ENST00000438518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.18■■□□□ 1.62
HDAC6-208ENST00000438518 MARF1Q9Y4F3 1742 aaKnown RBP25.17■■□□□ 1.62
HDAC6-208ENST00000438518 OVOS2A0A0J9YW53 1432 aa25.17■■□□□ 1.62
HDAC6-208ENST00000438518 OVOS2Q6IE36 1432 aa25.17■■□□□ 1.62
HDAC6-208ENST00000438518 CRYBG1Q9Y4K1 1723 aa25.17■■□□□ 1.62
HDAC6-208ENST00000438518 JCADQ9P266 1359 aa25.17■■□□□ 1.62
HDAC6-208ENST00000438518 NLRP13Q86W25 1043 aa25.16■■□□□ 1.62
HDAC6-208ENST00000438518 FYB1O15117 783 aa25.15■■□□□ 1.62
HDAC6-208ENST00000438518 HSPA1LP34931 641 aa25.15■■□□□ 1.62
HDAC6-208ENST00000438518 PHRF1Q9P1Y6 1649 aaKnown RBP25.15■■□□□ 1.62
HDAC6-208ENST00000438518 ABCA3Q99758 1704 aa25.15■■□□□ 1.62
HDAC6-208ENST00000438518 AMER1Q5JTC6 1135 aaPredicted RBP25.14■■□□□ 1.62
HDAC6-208ENST00000438518 PNPLA6Q8IY17 1366 aa25.14■■□□□ 1.61
HDAC6-208ENST00000438518 SLIT3O75094 1523 aa25.13■■□□□ 1.61
HDAC6-208ENST00000438518 LMOD2Q6P5Q4 547 aa25.13■■□□□ 1.61
HDAC6-208ENST00000438518 NME9Q86XW9 330 aa25.13■■□□□ 1.61
HDAC6-208ENST00000438518 COG3Q96JB2 828 aa25.13■■□□□ 1.61
HDAC6-208ENST00000438518 NLRP6P59044 892 aa25.12■■□□□ 1.61
HDAC6-208ENST00000438518 USP19O94966 1318 aa25.12■■□□□ 1.61
HDAC6-208ENST00000438518 KCNH5Q8NCM2 988 aa25.09■■□□□ 1.61
HDAC6-208ENST00000438518 GGNBP2Q9H3C7 697 aa25.08■■□□□ 1.61
HDAC6-208ENST00000438518 SPATA31A6Q5VVP1 1343 aa25.08■■□□□ 1.6
HDAC6-208ENST00000438518 NFAT5O94916 1531 aa25.03■■□□□ 1.6
HDAC6-208ENST00000438518 NUTM2GQ5VZR2 741 aa25.03■■□□□ 1.6
HDAC6-208ENST00000438518 AATKQ6ZMQ8 1374 aa25.03■■□□□ 1.6
HDAC6-208ENST00000438518 CC2D1BQ5T0F9 858 aaKnown RBP25.02■■□□□ 1.6
HDAC6-208ENST00000438518 MORC1Q86VD1 984 aa25.02■■□□□ 1.6
HDAC6-208ENST00000438518 GCP02774 474 aa25.01■■□□□ 1.59
HDAC6-208ENST00000438518 HAP1P54257 671 aaPredicted RBP25.01■■□□□ 1.59
HDAC6-208ENST00000438518 ZRANB1Q9UGI0 708 aa25.01■■□□□ 1.59
HDAC6-208ENST00000438518 PARD3Q8TEW0 1356 aa25.01■■□□□ 1.59
HDAC6-208ENST00000438518 ABCC6O95255 1503 aa25.01■■□□□ 1.59
HDAC6-208ENST00000438518 RALBP1Q15311 655 aa25■■□□□ 1.59
HDAC6-208ENST00000438518 LTN1O94822 1766 aa25■■□□□ 1.59
HDAC6-208ENST00000438518 CPDO75976 1380 aa24.99■■□□□ 1.59
HDAC6-208ENST00000438518 KIF24Q5T7B8 1368 aa24.99■■□□□ 1.59
HDAC6-208ENST00000438518 MAP2P11137 1827 aaKnown RBP24.98■■□□□ 1.59
HDAC6-208ENST00000438518 ANP32CO43423 234 aa24.95■■□□□ 1.58
HDAC6-208ENST00000438518 CABLES1Q8TDN4 633 aa24.95■■□□□ 1.58
HDAC6-208ENST00000438518 COL14A1Q05707 1796 aaKnown RBP24.95■■□□□ 1.58
HDAC6-208ENST00000438518 SMG6Q86US8 1419 aaKnown RBP24.95■■□□□ 1.58
HDAC6-208ENST00000438518 PRKRIP1Q9H875 184 aaPredicted RBP24.94■■□□□ 1.58
HDAC6-208ENST00000438518 RTL1A6NKG5 1358 aa24.93■■□□□ 1.58
HDAC6-208ENST00000438518 DIEXFQ68CQ4 756 aaKnown RBP24.93■■□□□ 1.58
HDAC6-208ENST00000438518 ARHGEF25Q86VW2 580 aa24.91■■□□□ 1.58
HDAC6-208ENST00000438518 LRP6O75581 1613 aa24.9■■□□□ 1.58
HDAC6-208ENST00000438518 KIAA0232Q92628 1395 aa24.9■■□□□ 1.58
HDAC6-208ENST00000438518 NWD2Q9ULI1 1742 aa24.89■■□□□ 1.58
HDAC6-208ENST00000438518 LMO7Q8WWI1 1683 aa24.89■■□□□ 1.58
HDAC6-208ENST00000438518 SOX12O15370 315 aa24.89■■□□□ 1.58
HDAC6-208ENST00000438518 COL18A1P39060 1754 aa24.89■■□□□ 1.57
HDAC6-208ENST00000438518 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.57
HDAC6-208ENST00000438518 MYBBP1AQ9BQG0 1328 aaKnown RBP24.88■■□□□ 1.57
HDAC6-208ENST00000438518 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
HDAC6-208ENST00000438518 NUTM2BA6NNL0 878 aaPredicted RBP24.88■■□□□ 1.57
HDAC6-208ENST00000438518 NUTM2EB1AL46 878 aaPredicted RBP24.88■■□□□ 1.57
HDAC6-208ENST00000438518 PLEKHG5O94827 1062 aa24.88■■□□□ 1.57
HDAC6-208ENST00000438518 NUTM2AQ8IVF1 878 aaPredicted RBP24.88■■□□□ 1.57
HDAC6-208ENST00000438518 FLT4P35916 1363 aa24.88■■□□□ 1.57
HDAC6-208ENST00000438518 PLCH1Q4KWH8 1693 aa24.88■■□□□ 1.57
HDAC6-208ENST00000438518 MAP3K19Q56UN5 1328 aa24.87■■□□□ 1.57
HDAC6-208ENST00000438518 TNNT2P45379 298 aaPredicted RBP24.87■■□□□ 1.57
HDAC6-208ENST00000438518 ZC3H6P61129 1189 aaKnown RBP24.87■■□□□ 1.57
HDAC6-208ENST00000438518 CNGB1Q14028 1251 aaPredicted RBP24.87■■□□□ 1.57
HDAC6-208ENST00000438518 PRDM11Q9NQV5 511 aa24.87■■□□□ 1.57
HDAC6-208ENST00000438518 PPP2R1AP30153 589 aa24.86■■□□□ 1.57
HDAC6-208ENST00000438518 ILDR1Q86SU0 546 aaPredicted RBP24.86■■□□□ 1.57
HDAC6-208ENST00000438518 POLKQ9UBT6 870 aa24.86■■□□□ 1.57
HDAC6-208ENST00000438518 PEAK1Q9H792 1746 aa24.86■■□□□ 1.57
HDAC6-208ENST00000438518 RRS1Q15050 365 aaKnown RBP24.85■■□□□ 1.57
HDAC6-208ENST00000438518 FAM208AQ9UK61 1670 aaKnown RBP24.85■■□□□ 1.57
HDAC6-208ENST00000438518 AMPHP49418 695 aa24.84■■□□□ 1.57
HDAC6-208ENST00000438518 ADAMTS2O95450 1211 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms