RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 PNPLA6Q8IY17 1366 aa20.55■□□□□ 0.88
CPNE1-215ENST00000437100 MON2Q7Z3U7 1717 aa20.54■□□□□ 0.88
CPNE1-215ENST00000437100 SHPRHQ149N8 1683 aa20.53■□□□□ 0.88
CPNE1-215ENST00000437100 ALS2Q96Q42 1657 aa20.53■□□□□ 0.88
CPNE1-215ENST00000437100 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
CPNE1-215ENST00000437100 TERF2IPQ9NYB0 399 aa20.52■□□□□ 0.88
CPNE1-215ENST00000437100 COL22A1Q8NFW1 1626 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-215ENST00000437100 ARHGEF10O15013 1369 aa20.51■□□□□ 0.87
CPNE1-215ENST00000437100 HDGFL2Q7Z4V5 671 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-215ENST00000437100 EDC4Q6P2E9 1401 aaKnown RBP20.51■□□□□ 0.87
CPNE1-215ENST00000437100 TTC21BQ7Z4L5 1316 aa20.5■□□□□ 0.87
CPNE1-215ENST00000437100 MED1Q15648 1581 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-215ENST00000437100 TTC21AQ8NDW8 1320 aa20.48■□□□□ 0.87
CPNE1-215ENST00000437100 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
CPNE1-215ENST00000437100 CARD14Q9BXL6 1004 aa20.47■□□□□ 0.87
CPNE1-215ENST00000437100 SPATA31A6Q5VVP1 1343 aa20.47■□□□□ 0.87
CPNE1-215ENST00000437100 PIK3C2AO00443 1686 aa20.45■□□□□ 0.86
CPNE1-215ENST00000437100 PAK3O75914 559 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-215ENST00000437100 USP19O94966 1318 aa20.44■□□□□ 0.86
CPNE1-215ENST00000437100 USP31Q70CQ4 1352 aa20.44■□□□□ 0.86
CPNE1-215ENST00000437100 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
CPNE1-215ENST00000437100 LRP6O75581 1613 aa20.43■□□□□ 0.86
CPNE1-215ENST00000437100 USP54Q70EL1 1684 aa20.42■□□□□ 0.86
CPNE1-215ENST00000437100 CRYBG1Q9Y4K1 1723 aa20.42■□□□□ 0.86
CPNE1-215ENST00000437100 PANK3Q9H999 370 aa20.42■□□□□ 0.86
CPNE1-215ENST00000437100 ABTB2Q8N961 1025 aa20.41■□□□□ 0.86
CPNE1-215ENST00000437100 OVOS2A0A0J9YW53 1432 aa20.41■□□□□ 0.86
CPNE1-215ENST00000437100 OVOS2Q6IE36 1432 aa20.41■□□□□ 0.86
CPNE1-215ENST00000437100 SLIT3O75094 1523 aa20.4■□□□□ 0.86
CPNE1-215ENST00000437100 LMOD2Q6P5Q4 547 aa20.4■□□□□ 0.86
CPNE1-215ENST00000437100 NME9Q86XW9 330 aa20.4■□□□□ 0.86
CPNE1-215ENST00000437100 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.4■□□□□ 0.86
CPNE1-215ENST00000437100 ABCA3Q99758 1704 aa20.4■□□□□ 0.86
CPNE1-215ENST00000437100 MARF1Q9Y4F3 1742 aaKnown RBP20.39■□□□□ 0.86
CPNE1-215ENST00000437100 FYB1O15117 783 aa20.37■□□□□ 0.85
CPNE1-215ENST00000437100 PER1O15534 1290 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-215ENST00000437100 NLRP6P59044 892 aa20.37■□□□□ 0.85
CPNE1-215ENST00000437100 NUTM2GQ5VZR2 741 aa20.37■□□□□ 0.85
CPNE1-215ENST00000437100 NLRP13Q86W25 1043 aa20.37■□□□□ 0.85
CPNE1-215ENST00000437100 CABLES1Q8TDN4 633 aa20.37■□□□□ 0.85
CPNE1-215ENST00000437100 PHRF1Q9P1Y6 1649 aaKnown RBP20.37■□□□□ 0.85
CPNE1-215ENST00000437100 ZRANB1Q9UGI0 708 aa20.36■□□□□ 0.85
CPNE1-215ENST00000437100 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.85
CPNE1-215ENST00000437100 NUTM2BA6NNL0 878 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-215ENST00000437100 NUTM2EB1AL46 878 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-215ENST00000437100 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-215ENST00000437100 NUTM2AQ8IVF1 878 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-215ENST00000437100 NFAT5O94916 1531 aa20.32■□□□□ 0.84
CPNE1-215ENST00000437100 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-215ENST00000437100 GCP02774 474 aa20.32■□□□□ 0.84
CPNE1-215ENST00000437100 CPDO75976 1380 aa20.32■□□□□ 0.84
CPNE1-215ENST00000437100 NSD2O96028 1365 aa20.32■□□□□ 0.84
CPNE1-215ENST00000437100 GGNBP2Q9H3C7 697 aa20.31■□□□□ 0.84
CPNE1-215ENST00000437100 KIF20BQ96Q89 1820 aa20.31■□□□□ 0.84
CPNE1-215ENST00000437100 NPC1L1Q9UHC9 1359 aa20.3■□□□□ 0.84
CPNE1-215ENST00000437100 KCNH5Q8NCM2 988 aa20.29■□□□□ 0.84
CPNE1-215ENST00000437100 COG3Q96JB2 828 aa20.29■□□□□ 0.84
CPNE1-215ENST00000437100 KNSTRNQ9Y448 316 aa20.29■□□□□ 0.84
CPNE1-215ENST00000437100 ADAMTS2O95450 1211 aa20.28■□□□□ 0.84
CPNE1-215ENST00000437100 KIAA0232Q92628 1395 aa20.27■□□□□ 0.84
CPNE1-215ENST00000437100 PLEKHG5O94827 1062 aa20.27■□□□□ 0.84
CPNE1-215ENST00000437100 HAP1P54257 671 aaPredicted RBP20.26■□□□□ 0.83
CPNE1-215ENST00000437100 SLIT2O94813 1529 aa20.26■□□□□ 0.83
CPNE1-215ENST00000437100 ARHGEF25Q86VW2 580 aa20.25■□□□□ 0.83
CPNE1-215ENST00000437100 FNBP4Q8N3X1 1017 aaPredicted RBP20.25■□□□□ 0.83
CPNE1-215ENST00000437100 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
CPNE1-215ENST00000437100 FAM83GA6ND36 823 aa20.24■□□□□ 0.83
CPNE1-215ENST00000437100 ZC3H6P61129 1189 aaKnown RBP20.24■□□□□ 0.83
CPNE1-215ENST00000437100 MEX3CQ5U5Q3 659 aaKnown RBP20.24■□□□□ 0.83
CPNE1-215ENST00000437100 ABCC6O95255 1503 aa20.23■□□□□ 0.83
CPNE1-215ENST00000437100 DDX10Q13206 875 aaKnown RBP20.23■□□□□ 0.83
CPNE1-215ENST00000437100 C8orf37Q96NL8 207 aa20.23■□□□□ 0.83
CPNE1-215ENST00000437100 COL14A1Q05707 1796 aaKnown RBP20.23■□□□□ 0.83
CPNE1-215ENST00000437100 LMO7Q8WWI1 1683 aa20.22■□□□□ 0.83
CPNE1-215ENST00000437100 AATKQ6ZMQ8 1374 aa20.22■□□□□ 0.83
CPNE1-215ENST00000437100 PRDM11Q9NQV5 511 aa20.22■□□□□ 0.83
CPNE1-215ENST00000437100 BCL9LQ86UU0 1499 aa20.21■□□□□ 0.83
CPNE1-215ENST00000437100 COL18A1P39060 1754 aa20.21■□□□□ 0.83
CPNE1-215ENST00000437100 SOX12O15370 315 aa20.2■□□□□ 0.82
CPNE1-215ENST00000437100 RGS17Q9UGC6 210 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-215ENST00000437100 AFF2P51816 1311 aa20.2■□□□□ 0.82
CPNE1-215ENST00000437100 CHRNA2Q15822 529 aa20.19■□□□□ 0.82
CPNE1-215ENST00000437100 NGLY1Q96IV0 654 aa20.19■□□□□ 0.82
CPNE1-215ENST00000437100 MAP3K19Q56UN5 1328 aa20.19■□□□□ 0.82
CPNE1-215ENST00000437100 PLCH1Q4KWH8 1693 aa20.19■□□□□ 0.82
CPNE1-215ENST00000437100 FBLN1P23142 703 aa20.18■□□□□ 0.82
CPNE1-215ENST00000437100 CAMTA1Q9Y6Y1 1673 aa20.18■□□□□ 0.82
CPNE1-215ENST00000437100 NWD2Q9ULI1 1742 aa20.18■□□□□ 0.82
CPNE1-215ENST00000437100 NRAPQ86VF7 1730 aa20.17■□□□□ 0.82
CPNE1-215ENST00000437100 CC2D1BQ5T0F9 858 aaKnown RBP20.17■□□□□ 0.82
CPNE1-215ENST00000437100 MORC1Q86VD1 984 aa20.17■□□□□ 0.82
CPNE1-215ENST00000437100 RTL1A6NKG5 1358 aa20.17■□□□□ 0.82
CPNE1-215ENST00000437100 KIF24Q5T7B8 1368 aa20.17■□□□□ 0.82
CPNE1-215ENST00000437100 SMG6Q86US8 1419 aaKnown RBP20.17■□□□□ 0.82
CPNE1-215ENST00000437100 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.16■□□□□ 0.82
CPNE1-215ENST00000437100 RRS1Q15050 365 aaKnown RBP20.15■□□□□ 0.82
CPNE1-215ENST00000437100 BTG4Q9NY30 223 aa20.15■□□□□ 0.82
CPNE1-215ENST00000437100 AXIN2Q9Y2T1 843 aa20.15■□□□□ 0.82
CPNE1-215ENST00000437100 COL5A2P05997 1499 aaPredicted RBP20.15■□□□□ 0.82
CPNE1-215ENST00000437100 LTN1O94822 1766 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms