RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 RGS12O14924 1447 aa26.06■■□□□ 1.76
HMGN1-207ENST00000436324 PPIP5K1Q6PFW1 1433 aa26.06■■□□□ 1.76
HMGN1-207ENST00000436324 UNC5CLQ8IV45 518 aa26.06■■□□□ 1.76
HMGN1-207ENST00000436324 TOPAZ1Q8N9V7 1692 aa26.05■■□□□ 1.76
HMGN1-207ENST00000436324 ALS2Q96Q42 1657 aa26.04■■□□□ 1.76
HMGN1-207ENST00000436324 FAM83GA6ND36 823 aa26.04■■□□□ 1.76
HMGN1-207ENST00000436324 CABP1Q9NZU7 370 aa26.04■■□□□ 1.76
HMGN1-207ENST00000436324 SLIT2O94813 1529 aa26.04■■□□□ 1.76
HMGN1-207ENST00000436324 GJD4Q96KN9 370 aaPredicted RBP26.02■■□□□ 1.76
HMGN1-207ENST00000436324 ABCA3Q99758 1704 aa26.01■■□□□ 1.75
HMGN1-207ENST00000436324 RALGAPBQ86X10 1494 aa26■■□□□ 1.75
HMGN1-207ENST00000436324 ABTB2Q8N961 1025 aa25.99■■□□□ 1.75
HMGN1-207ENST00000436324 UPF1Q92900 1129 aaKnown RBP eCLIP25.99■■□□□ 1.75
HMGN1-207ENST00000436324 CCDC9Q9Y3X0 531 aaKnown RBP25.99■■□□□ 1.75
HMGN1-207ENST00000436324 BTG4Q9NY30 223 aa25.96■■□□□ 1.75
HMGN1-207ENST00000436324 PRDM11Q9NQV5 511 aa25.95■■□□□ 1.74
HMGN1-207ENST00000436324 ZC3H6P61129 1189 aaKnown RBP25.94■■□□□ 1.74
HMGN1-207ENST00000436324 VPS72Q15906 364 aa25.94■■□□□ 1.74
HMGN1-207ENST00000436324 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.93■■□□□ 1.74
HMGN1-207ENST00000436324 PLCH1Q4KWH8 1693 aa25.93■■□□□ 1.74
HMGN1-207ENST00000436324 CHRNA2Q15822 529 aa25.92■■□□□ 1.74
HMGN1-207ENST00000436324 KIAA0232Q92628 1395 aa25.91■■□□□ 1.74
HMGN1-207ENST00000436324 USP6P35125 1406 aa25.9■■□□□ 1.74
HMGN1-207ENST00000436324 GLI3P10071 1580 aa25.9■■□□□ 1.74
HMGN1-207ENST00000436324 CRYBG1Q9Y4K1 1723 aa25.89■■□□□ 1.74
HMGN1-207ENST00000436324 NLRP13Q86W25 1043 aa25.89■■□□□ 1.74
HMGN1-207ENST00000436324 ATAD2Q6PL18 1390 aa25.89■■□□□ 1.74
HMGN1-207ENST00000436324 SBNO2Q9Y2G9 1366 aa25.88■■□□□ 1.73
HMGN1-207ENST00000436324 NWD2Q9ULI1 1742 aa25.88■■□□□ 1.73
HMGN1-207ENST00000436324 COL14A1Q05707 1796 aaKnown RBP25.87■■□□□ 1.73
HMGN1-207ENST00000436324 NLRP6P59044 892 aa25.87■■□□□ 1.73
HMGN1-207ENST00000436324 BRD4O60885 1362 aaPredicted RBP25.86■■□□□ 1.73
HMGN1-207ENST00000436324 ST20-MTHFSA0A0A6YYL1 179 aa25.86■■□□□ 1.73
HMGN1-207ENST00000436324 USP19O94966 1318 aa25.86■■□□□ 1.73
HMGN1-207ENST00000436324 PHRF1Q9P1Y6 1649 aaKnown RBP25.85■■□□□ 1.73
HMGN1-207ENST00000436324 SEPT12Q8IYM1 358 aa25.85■■□□□ 1.73
HMGN1-207ENST00000436324 TMC1Q8TDI8 760 aa25.85■■□□□ 1.73
HMGN1-207ENST00000436324 ZNF692Q9BU19 519 aaPredicted RBP25.85■■□□□ 1.73
HMGN1-207ENST00000436324 A0A0G2JS52 829 aa25.84■■□□□ 1.73
HMGN1-207ENST00000436324 GCP02774 474 aa25.84■■□□□ 1.73
HMGN1-207ENST00000436324 MYT1Q01538 1121 aa25.84■■□□□ 1.73
HMGN1-207ENST00000436324 STRN4Q9NRL3 753 aa25.84■■□□□ 1.73
HMGN1-207ENST00000436324 ZBTB7CA1YPR0 619 aa25.83■■□□□ 1.73
HMGN1-207ENST00000436324 TTC21BQ7Z4L5 1316 aa25.83■■□□□ 1.73
HMGN1-207ENST00000436324 SSH2Q76I76 1423 aa25.82■■□□□ 1.72
HMGN1-207ENST00000436324 FAM98CQ17RN3 349 aaKnown RBP25.82■■□□□ 1.72
HMGN1-207ENST00000436324 NRAPQ86VF7 1730 aa25.82■■□□□ 1.72
HMGN1-207ENST00000436324 CLSPNQ9HAW4 1339 aa25.82■■□□□ 1.72
HMGN1-207ENST00000436324 CCER1Q8TC90 406 aaPredicted RBP25.81■■□□□ 1.72
HMGN1-207ENST00000436324 KTN1Q86UP2 1357 aaKnown RBP25.81■■□□□ 1.72
HMGN1-207ENST00000436324 TESK2Q96S53 571 aa25.8■■□□□ 1.72
HMGN1-207ENST00000436324 NRKQ7Z2Y5 1582 aa25.79■■□□□ 1.72
HMGN1-207ENST00000436324 EVA1CP58658 441 aa25.79■■□□□ 1.72
HMGN1-207ENST00000436324 SLC12A5Q9H2X9 1139 aa25.79■■□□□ 1.72
HMGN1-207ENST00000436324 CPSF1Q10570 1443 aaKnown RBP25.79■■□□□ 1.72
HMGN1-207ENST00000436324 ONECUT3O60422 494 aaPredicted RBP25.78■■□□□ 1.72
HMGN1-207ENST00000436324 SPATA31A5Q5VU36 1347 aa25.78■■□□□ 1.72
HMGN1-207ENST00000436324 SPATA31A7Q8IWB4 1347 aa25.78■■□□□ 1.72
HMGN1-207ENST00000436324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.77■■□□□ 1.72
HMGN1-207ENST00000436324 TIMELESSQ9UNS1 1208 aa25.77■■□□□ 1.72
HMGN1-207ENST00000436324 SOX12O15370 315 aa25.76■■□□□ 1.71
HMGN1-207ENST00000436324 CPDO75976 1380 aa25.76■■□□□ 1.71
HMGN1-207ENST00000436324 USP47Q96K76 1375 aa25.75■■□□□ 1.71
HMGN1-207ENST00000436324 TTC21AQ8NDW8 1320 aa25.75■■□□□ 1.71
HMGN1-207ENST00000436324 HDGFL2Q7Z4V5 671 aaPredicted RBP25.75■■□□□ 1.71
HMGN1-207ENST00000436324 AKAP12Q02952 1782 aa25.74■■□□□ 1.71
HMGN1-207ENST00000436324 KRT27Q7Z3Y8 459 aa25.74■■□□□ 1.71
HMGN1-207ENST00000436324 USP35Q9P2H5 1018 aa25.74■■□□□ 1.71
HMGN1-207ENST00000436324 PIK3C2AO00443 1686 aa25.74■■□□□ 1.71
HMGN1-207ENST00000436324 ZRANB1Q9UGI0 708 aa25.73■■□□□ 1.71
HMGN1-207ENST00000436324 SPATA31A1Q5TZJ5 1347 aa25.72■■□□□ 1.71
HMGN1-207ENST00000436324 LARP1Q6PKG0 1096 aaKnown RBP25.72■■□□□ 1.71
HMGN1-207ENST00000436324 PUS7Q96PZ0 661 aaKnown RBP25.72■■□□□ 1.71
HMGN1-207ENST00000436324 CD163L1Q9NR16 1453 aa25.72■■□□□ 1.71
HMGN1-207ENST00000436324 CAMTA1Q9Y6Y1 1673 aa25.71■■□□□ 1.71
HMGN1-207ENST00000436324 TERF2IPQ9NYB0 399 aa25.71■■□□□ 1.71
HMGN1-207ENST00000436324 SLIT3O75094 1523 aa25.71■■□□□ 1.71
HMGN1-207ENST00000436324 BRWD3Q6RI45 1802 aa25.7■■□□□ 1.71
HMGN1-207ENST00000436324 SLC24A1O60721 1099 aa25.7■■□□□ 1.7
HMGN1-207ENST00000436324 NME9Q86XW9 330 aa25.69■■□□□ 1.7
HMGN1-207ENST00000436324 TMF1P82094 1093 aa25.68■■□□□ 1.7
HMGN1-207ENST00000436324 KCNH5Q8NCM2 988 aa25.68■■□□□ 1.7
HMGN1-207ENST00000436324 A0A1W2PP64 1363 aa25.67■■□□□ 1.7
HMGN1-207ENST00000436324 FAM182BQ5T319 152 aa25.66■■□□□ 1.7
HMGN1-207ENST00000436324 LMO7Q8WWI1 1683 aa25.66■■□□□ 1.7
HMGN1-207ENST00000436324 MON2Q7Z3U7 1717 aa25.66■■□□□ 1.7
HMGN1-207ENST00000436324 CCDC125Q86Z20 511 aa25.65■■□□□ 1.7
HMGN1-207ENST00000436324 AATKQ6ZMQ8 1374 aa25.65■■□□□ 1.7
HMGN1-207ENST00000436324 ARHGEF25Q86VW2 580 aa25.64■■□□□ 1.7
HMGN1-207ENST00000436324 AXIN2Q9Y2T1 843 aa25.63■■□□□ 1.69
HMGN1-207ENST00000436324 COL5A2P05997 1499 aaPredicted RBP25.63■■□□□ 1.69
HMGN1-207ENST00000436324 EDC4Q6P2E9 1401 aaKnown RBP25.63■■□□□ 1.69
HMGN1-207ENST00000436324 TCP11L2Q8N4U5 519 aa25.62■■□□□ 1.69
HMGN1-207ENST00000436324 USP31Q70CQ4 1352 aa25.61■■□□□ 1.69
HMGN1-207ENST00000436324 NINLQ9Y2I6 1382 aa25.6■■□□□ 1.69
HMGN1-207ENST00000436324 SF3B2Q13435 895 aaKnown RBP25.6■■□□□ 1.69
HMGN1-207ENST00000436324 BARGINQ6ZT62 677 aa25.6■■□□□ 1.69
HMGN1-207ENST00000436324 BLMP54132 1417 aaPredicted RBP25.6■■□□□ 1.69
HMGN1-207ENST00000436324 THSD7AQ9UPZ6 1657 aa25.59■■□□□ 1.69
HMGN1-207ENST00000436324 TOM1L2Q6ZVM7 507 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms