RNA–Protein interactions for RNA: ENST00000435883.1

AC003958.1-201, humanhuman

BASIC

Gene AC003958.1, Length 421 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003958.1-201ENST00000435883 XRN1Q8IZH2 1706 aaKnown RBP17.35■□□□□ 0.37
AC003958.1-201ENST00000435883 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
AC003958.1-201ENST00000435883 PDE3AQ14432 1141 aa17.34■□□□□ 0.37
AC003958.1-201ENST00000435883 NUTM2DQ5VT03 806 aaPredicted RBP17.34■□□□□ 0.37
AC003958.1-201ENST00000435883 RPGRIP1LQ68CZ1 1315 aa17.34■□□□□ 0.37
AC003958.1-201ENST00000435883 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
AC003958.1-201ENST00000435883 SHPRHQ149N8 1683 aa17.33■□□□□ 0.37
AC003958.1-201ENST00000435883 PIK3R4Q99570 1358 aa17.33■□□□□ 0.36
AC003958.1-201ENST00000435883 VIRMAQ69YN4 1812 aaKnown RBP17.31■□□□□ 0.36
AC003958.1-201ENST00000435883 DAXXQ9UER7 740 aaPredicted RBP17.31■□□□□ 0.36
AC003958.1-201ENST00000435883 PPLO60437 1756 aa17.3■□□□□ 0.36
AC003958.1-201ENST00000435883 CHGAP10645 457 aaKnown RBP17.3■□□□□ 0.36
AC003958.1-201ENST00000435883 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.3■□□□□ 0.36
AC003958.1-201ENST00000435883 NSD2O96028 1365 aa17.29■□□□□ 0.36
AC003958.1-201ENST00000435883 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
AC003958.1-201ENST00000435883 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
AC003958.1-201ENST00000435883 HDGFP51858 240 aaKnown RBP17.28■□□□□ 0.36
AC003958.1-201ENST00000435883 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
AC003958.1-201ENST00000435883 QRICH2Q9H0J4 1663 aa17.27■□□□□ 0.36
AC003958.1-201ENST00000435883 APAF1O14727 1248 aa17.27■□□□□ 0.36
AC003958.1-201ENST00000435883 NEFMP07197 916 aa17.27■□□□□ 0.36
AC003958.1-201ENST00000435883 CFAP70Q5T0N1 1121 aa17.27■□□□□ 0.36
AC003958.1-201ENST00000435883 NHSL1Q5SYE7 1610 aa17.26■□□□□ 0.35
AC003958.1-201ENST00000435883 DCCP43146 1447 aa17.26■□□□□ 0.35
AC003958.1-201ENST00000435883 NEXMIFQ5QGS0 1516 aa17.26■□□□□ 0.35
AC003958.1-201ENST00000435883 SPATA31A6Q5VVP1 1343 aa17.25■□□□□ 0.35
AC003958.1-201ENST00000435883 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
AC003958.1-201ENST00000435883 MST1RQ04912 1400 aa17.25■□□□□ 0.35
AC003958.1-201ENST00000435883 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
AC003958.1-201ENST00000435883 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
AC003958.1-201ENST00000435883 CCDC27Q2M243 656 aa17.24■□□□□ 0.35
AC003958.1-201ENST00000435883 BRINP3Q76B58 766 aa17.24■□□□□ 0.35
AC003958.1-201ENST00000435883 CADPS2Q86UW7 1296 aa17.24■□□□□ 0.35
AC003958.1-201ENST00000435883 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
AC003958.1-201ENST00000435883 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
AC003958.1-201ENST00000435883 C14orf93Q9H972 538 aaKnown RBP17.24■□□□□ 0.35
AC003958.1-201ENST00000435883 AMOTL2Q9Y2J4 779 aa17.24■□□□□ 0.35
AC003958.1-201ENST00000435883 METP08581 1390 aa17.24■□□□□ 0.35
AC003958.1-201ENST00000435883 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
AC003958.1-201ENST00000435883 C8orf34Q49A92 452 aa17.23■□□□□ 0.35
AC003958.1-201ENST00000435883 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
AC003958.1-201ENST00000435883 RUNDC1Q96C34 613 aa17.23■□□□□ 0.35
AC003958.1-201ENST00000435883 CARD14Q9BXL6 1004 aa17.23■□□□□ 0.35
AC003958.1-201ENST00000435883 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.35
AC003958.1-201ENST00000435883 CT47B1P0C2W7 299 aaPredicted RBP17.21■□□□□ 0.35
AC003958.1-201ENST00000435883 MORC1Q86VD1 984 aa17.21■□□□□ 0.35
AC003958.1-201ENST00000435883 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
AC003958.1-201ENST00000435883 ATF3P18847 181 aa17.2■□□□□ 0.34
AC003958.1-201ENST00000435883 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
AC003958.1-201ENST00000435883 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
AC003958.1-201ENST00000435883 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
AC003958.1-201ENST00000435883 ADGRL3Q9HAR2 1447 aa17.19■□□□□ 0.34
AC003958.1-201ENST00000435883 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
AC003958.1-201ENST00000435883 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
AC003958.1-201ENST00000435883 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
AC003958.1-201ENST00000435883 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
AC003958.1-201ENST00000435883 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
AC003958.1-201ENST00000435883 BECN1Q14457 450 aa17.15■□□□□ 0.34
AC003958.1-201ENST00000435883 ADGRB2O60241 1585 aa17.15■□□□□ 0.34
AC003958.1-201ENST00000435883 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
AC003958.1-201ENST00000435883 ARHGEF28Q8N1W1 1705 aaKnown RBP17.14■□□□□ 0.33
AC003958.1-201ENST00000435883 MEX3CQ5U5Q3 659 aaKnown RBP17.14■□□□□ 0.33
AC003958.1-201ENST00000435883 ZNF772Q68DY9 489 aaPredicted RBP17.14■□□□□ 0.33
AC003958.1-201ENST00000435883 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
AC003958.1-201ENST00000435883 PNPLA6Q8IY17 1366 aa17.14■□□□□ 0.33
AC003958.1-201ENST00000435883 VGFO15240 615 aaPredicted RBP17.13■□□□□ 0.33
AC003958.1-201ENST00000435883 BCAR3O75815 825 aa17.13■□□□□ 0.33
AC003958.1-201ENST00000435883 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
AC003958.1-201ENST00000435883 PTCH1Q13635 1447 aa17.13■□□□□ 0.33
AC003958.1-201ENST00000435883 NFKBIBQ15653 356 aa17.12■□□□□ 0.33
AC003958.1-201ENST00000435883 UPF1Q92900 1129 aaKnown RBP eCLIP17.12■□□□□ 0.33
AC003958.1-201ENST00000435883 ABCC11Q96J66 1382 aa17.12■□□□□ 0.33
AC003958.1-201ENST00000435883 RARSP54136 660 aaKnown RBP17.11■□□□□ 0.33
AC003958.1-201ENST00000435883 GSE1Q14687 1217 aa17.11■□□□□ 0.33
AC003958.1-201ENST00000435883 C1orf167Q5SNV9 1468 aa17.11■□□□□ 0.33
AC003958.1-201ENST00000435883 NUTM2BA6NNL0 878 aaPredicted RBP17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 NUTM2EB1AL46 878 aaPredicted RBP17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 RGS3P49796 1198 aa17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 NUTM2AQ8IVF1 878 aaPredicted RBP17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 UPF2Q9HAU5 1272 aaKnown RBP17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 AFF2P51816 1311 aa17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 RGS12O14924 1447 aa17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 ANKRD26Q9UPS8 1709 aa17.1■□□□□ 0.33
AC003958.1-201ENST00000435883 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
AC003958.1-201ENST00000435883 TULP4Q9NRJ4 1543 aa17.08■□□□□ 0.32
AC003958.1-201ENST00000435883 IL16Q14005 1332 aa17.08■□□□□ 0.32
AC003958.1-201ENST00000435883 PNNQ9H307 717 aaKnown RBP17.08■□□□□ 0.32
AC003958.1-201ENST00000435883 ATAD2Q6PL18 1390 aa17.07■□□□□ 0.32
AC003958.1-201ENST00000435883 TRAK1Q9UPV9 953 aa17.07■□□□□ 0.32
AC003958.1-201ENST00000435883 IGHDP01880 384 aa17.06■□□□□ 0.32
AC003958.1-201ENST00000435883 RXRBP28702 533 aa17.06■□□□□ 0.32
AC003958.1-201ENST00000435883 MTHFSP49914 203 aa17.05■□□□□ 0.32
AC003958.1-201ENST00000435883 SKAP1Q86WV1 359 aa17.05■□□□□ 0.32
AC003958.1-201ENST00000435883 SLC12A5Q9H2X9 1139 aa17.05■□□□□ 0.32
AC003958.1-201ENST00000435883 COG6Q9Y2V7 657 aa17.05■□□□□ 0.32
AC003958.1-201ENST00000435883 COL22A1Q8NFW1 1626 aaPredicted RBP17.04■□□□□ 0.32
AC003958.1-201ENST00000435883 LRRC59Q96AG4 307 aaKnown RBP17.04■□□□□ 0.32
AC003958.1-201ENST00000435883 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms