RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 SEPT12Q8IYM1 358 aa18.98■□□□□ 0.63
CDCA4P4-201ENST00000435216 BTG4Q9NY30 223 aa18.97■□□□□ 0.63
CDCA4P4-201ENST00000435216 TOPAZ1Q8N9V7 1692 aa18.97■□□□□ 0.63
CDCA4P4-201ENST00000435216 COL14A1Q05707 1796 aaKnown RBP18.96■□□□□ 0.63
CDCA4P4-201ENST00000435216 NUTM2GQ5VZR2 741 aa18.95■□□□□ 0.62
CDCA4P4-201ENST00000435216 SIN3AQ96ST3 1273 aa18.95■□□□□ 0.62
CDCA4P4-201ENST00000435216 L3MBTL2Q969R5 705 aa18.94■□□□□ 0.62
CDCA4P4-201ENST00000435216 ACEP12821 1306 aa18.94■□□□□ 0.62
CDCA4P4-201ENST00000435216 A0A0G2JS52 829 aa18.93■□□□□ 0.62
CDCA4P4-201ENST00000435216 MYT1Q01538 1121 aa18.93■□□□□ 0.62
CDCA4P4-201ENST00000435216 PHRF1Q9P1Y6 1649 aaKnown RBP18.92■□□□□ 0.62
CDCA4P4-201ENST00000435216 FAM98CQ17RN3 349 aaKnown RBP18.92■□□□□ 0.62
CDCA4P4-201ENST00000435216 CCDC61Q9Y6R9 512 aa18.92■□□□□ 0.62
CDCA4P4-201ENST00000435216 QRICH2Q9H0J4 1663 aa18.92■□□□□ 0.62
CDCA4P4-201ENST00000435216 SRPK2P78362 688 aaKnown RBP18.91■□□□□ 0.62
CDCA4P4-201ENST00000435216 NBPF8Q3BBV2 869 aa18.91■□□□□ 0.62
CDCA4P4-201ENST00000435216 PRDM11Q9NQV5 511 aa18.91■□□□□ 0.62
CDCA4P4-201ENST00000435216 CENPJQ9HC77 1338 aaPredicted RBP18.91■□□□□ 0.62
CDCA4P4-201ENST00000435216 POLR3AO14802 1390 aaPredicted RBP18.91■□□□□ 0.62
CDCA4P4-201ENST00000435216 ONECUT3O60422 494 aaPredicted RBP18.9■□□□□ 0.62
CDCA4P4-201ENST00000435216 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
CDCA4P4-201ENST00000435216 CHRNA2Q15822 529 aa18.9■□□□□ 0.62
CDCA4P4-201ENST00000435216 CCDC125Q86Z20 511 aa18.9■□□□□ 0.62
CDCA4P4-201ENST00000435216 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
CDCA4P4-201ENST00000435216 KIAA0232Q92628 1395 aa18.9■□□□□ 0.62
CDCA4P4-201ENST00000435216 KRT27Q7Z3Y8 459 aa18.89■□□□□ 0.61
CDCA4P4-201ENST00000435216 BLMP54132 1417 aaPredicted RBP18.89■□□□□ 0.61
CDCA4P4-201ENST00000435216 PLEKHG3A1L390 1219 aa18.88■□□□□ 0.61
CDCA4P4-201ENST00000435216 ZC3H6P61129 1189 aaKnown RBP18.88■□□□□ 0.61
CDCA4P4-201ENST00000435216 DEFB132Q7Z7B7 95 aa18.88■□□□□ 0.61
CDCA4P4-201ENST00000435216 PPIP5K1Q6PFW1 1433 aa18.88■□□□□ 0.61
CDCA4P4-201ENST00000435216 TRPM1Q7Z4N2 1603 aa18.87■□□□□ 0.61
CDCA4P4-201ENST00000435216 SPATA31A5Q5VU36 1347 aa18.86■□□□□ 0.61
CDCA4P4-201ENST00000435216 SPATA31A7Q8IWB4 1347 aa18.86■□□□□ 0.61
CDCA4P4-201ENST00000435216 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
CDCA4P4-201ENST00000435216 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
CDCA4P4-201ENST00000435216 FAM182BQ5T319 152 aa18.85■□□□□ 0.61
CDCA4P4-201ENST00000435216 ABTB2Q8N961 1025 aa18.85■□□□□ 0.61
CDCA4P4-201ENST00000435216 STRN4Q9NRL3 753 aa18.85■□□□□ 0.61
CDCA4P4-201ENST00000435216 NRKQ7Z2Y5 1582 aa18.85■□□□□ 0.61
CDCA4P4-201ENST00000435216 SF3B2Q13435 895 aaKnown RBP18.83■□□□□ 0.6
CDCA4P4-201ENST00000435216 CABP1Q9NZU7 370 aa18.82■□□□□ 0.6
CDCA4P4-201ENST00000435216 THSD7AQ9UPZ6 1657 aa18.82■□□□□ 0.6
CDCA4P4-201ENST00000435216 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
CDCA4P4-201ENST00000435216 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
CDCA4P4-201ENST00000435216 USP35Q9P2H5 1018 aa18.8■□□□□ 0.6
CDCA4P4-201ENST00000435216 USP19O94966 1318 aa18.79■□□□□ 0.6
CDCA4P4-201ENST00000435216 CAMTA1Q9Y6Y1 1673 aa18.79■□□□□ 0.6
CDCA4P4-201ENST00000435216 EVA1CP58658 441 aa18.78■□□□□ 0.6
CDCA4P4-201ENST00000435216 USP6P35125 1406 aa18.77■□□□□ 0.6
CDCA4P4-201ENST00000435216 SSH2Q76I76 1423 aa18.77■□□□□ 0.6
CDCA4P4-201ENST00000435216 LMO7Q8WWI1 1683 aa18.77■□□□□ 0.6
CDCA4P4-201ENST00000435216 ZBTB7CA1YPR0 619 aa18.77■□□□□ 0.6
CDCA4P4-201ENST00000435216 NLRP13Q86W25 1043 aa18.77■□□□□ 0.6
CDCA4P4-201ENST00000435216 EVC2Q86UK5 1308 aa18.76■□□□□ 0.59
CDCA4P4-201ENST00000435216 GCP02774 474 aa18.76■□□□□ 0.59
CDCA4P4-201ENST00000435216 LARP1Q6PKG0 1096 aaKnown RBP18.76■□□□□ 0.59
CDCA4P4-201ENST00000435216 CPDO75976 1380 aa18.75■□□□□ 0.59
CDCA4P4-201ENST00000435216 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
CDCA4P4-201ENST00000435216 PIK3C2AO00443 1686 aa18.74■□□□□ 0.59
CDCA4P4-201ENST00000435216 NLRP6P59044 892 aa18.74■□□□□ 0.59
CDCA4P4-201ENST00000435216 BAG6P46379 1132 aa18.73■□□□□ 0.59
CDCA4P4-201ENST00000435216 EN1Q05925 392 aaPredicted RBP18.73■□□□□ 0.59
CDCA4P4-201ENST00000435216 TNS1Q9HBL0 1735 aaKnown RBP18.72■□□□□ 0.59
CDCA4P4-201ENST00000435216 BRD4O60885 1362 aaPredicted RBP18.72■□□□□ 0.59
CDCA4P4-201ENST00000435216 SLIT3O75094 1523 aa18.71■□□□□ 0.59
CDCA4P4-201ENST00000435216 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
CDCA4P4-201ENST00000435216 AKAP12Q02952 1782 aa18.7■□□□□ 0.58
CDCA4P4-201ENST00000435216 PSDA5PKW4 1024 aaPredicted RBP18.7■□□□□ 0.58
CDCA4P4-201ENST00000435216 BARGINQ6ZT62 677 aa18.69■□□□□ 0.58
CDCA4P4-201ENST00000435216 TCP11L2Q8N4U5 519 aa18.69■□□□□ 0.58
CDCA4P4-201ENST00000435216 SOX12O15370 315 aa18.68■□□□□ 0.58
CDCA4P4-201ENST00000435216 TRIM37O94972 964 aa18.68■□□□□ 0.58
CDCA4P4-201ENST00000435216 CARD11Q9BXL7 1154 aa18.68■□□□□ 0.58
CDCA4P4-201ENST00000435216 TTC21BQ7Z4L5 1316 aa18.68■□□□□ 0.58
CDCA4P4-201ENST00000435216 PDE3BQ13370 1112 aa18.67■□□□□ 0.58
CDCA4P4-201ENST00000435216 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
CDCA4P4-201ENST00000435216 EZH2Q15910 746 aaKnown RBP18.66■□□□□ 0.58
CDCA4P4-201ENST00000435216 FAM196AQ6ZSG2 479 aa18.66■□□□□ 0.58
CDCA4P4-201ENST00000435216 CRB1P82279 1406 aa18.66■□□□□ 0.58
CDCA4P4-201ENST00000435216 COL18A1P39060 1754 aa18.65■□□□□ 0.58
CDCA4P4-201ENST00000435216 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
CDCA4P4-201ENST00000435216 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
CDCA4P4-201ENST00000435216 KTN1Q86UP2 1357 aaKnown RBP18.65■□□□□ 0.58
CDCA4P4-201ENST00000435216 CPSF1Q10570 1443 aaKnown RBP18.65■□□□□ 0.58
CDCA4P4-201ENST00000435216 AXIN2Q9Y2T1 843 aa18.64■□□□□ 0.57
CDCA4P4-201ENST00000435216 MON2Q7Z3U7 1717 aa18.63■□□□□ 0.57
CDCA4P4-201ENST00000435216 PARP4Q9UKK3 1724 aaKnown RBP18.63■□□□□ 0.57
CDCA4P4-201ENST00000435216 RGPD5Q99666 1765 aa18.63■□□□□ 0.57
CDCA4P4-201ENST00000435216 THRAP3Q9Y2W1 955 aaKnown RBP18.63■□□□□ 0.57
CDCA4P4-201ENST00000435216 DISP2A7MBM2 1401 aa18.63■□□□□ 0.57
CDCA4P4-201ENST00000435216 APBA3O96018 575 aa18.62■□□□□ 0.57
CDCA4P4-201ENST00000435216 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
CDCA4P4-201ENST00000435216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDCA4P4-201ENST00000435216 SBNO2Q9Y2G9 1366 aa18.62■□□□□ 0.57
CDCA4P4-201ENST00000435216 TTC21AQ8NDW8 1320 aa18.61■□□□□ 0.57
CDCA4P4-201ENST00000435216 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
CDCA4P4-201ENST00000435216 TMC1Q8TDI8 760 aa18.61■□□□□ 0.57
CDCA4P4-201ENST00000435216 LRRC37A3O60309 1634 aa18.6■□□□□ 0.57
CDCA4P4-201ENST00000435216 ARHGEF25Q86VW2 580 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms