RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 KCNJ4P48050 445 aa9.14□□□□□ -0.95
CPSF6-202ENST00000435070 APBB1O00213 710 aa9.13□□□□□ -0.95
CPSF6-202ENST00000435070 HMGN5P82970 282 aaKnown RBP9.13□□□□□ -0.95
CPSF6-202ENST00000435070 HDAC1Q13547 482 aaPredicted RBP9.13□□□□□ -0.95
CPSF6-202ENST00000435070 CDCA8Q53HL2 280 aa9.13□□□□□ -0.95
CPSF6-202ENST00000435070 IBTKQ9P2D0 1353 aaPredicted RBP9.13□□□□□ -0.95
CPSF6-202ENST00000435070 GAPVD1Q14C86 1478 aa9.13□□□□□ -0.95
CPSF6-202ENST00000435070 PAXIP1Q6ZW49 1069 aaPredicted RBP9.13□□□□□ -0.95
CPSF6-202ENST00000435070 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
CPSF6-202ENST00000435070 CARD14Q9BXL6 1004 aa9.12□□□□□ -0.95
CPSF6-202ENST00000435070 NUCB1Q02818 461 aa9.12□□□□□ -0.95
CPSF6-202ENST00000435070 ATF7IPQ6VMQ6 1270 aa9.12□□□□□ -0.95
CPSF6-202ENST00000435070 TSPY26PQ9H489 355 aa9.12□□□□□ -0.95
CPSF6-202ENST00000435070 WDR7Q9Y4E6 1490 aa9.12□□□□□ -0.95
CPSF6-202ENST00000435070 PRIMPOLQ96LW4 560 aa9.11□□□□□ -0.95
CPSF6-202ENST00000435070 TOPBP1Q92547 1522 aa9.11□□□□□ -0.95
CPSF6-202ENST00000435070 BMP2KLQ5H9B9 411 aa9.11□□□□□ -0.95
CPSF6-202ENST00000435070 ZMYM3Q14202 1370 aa9.11□□□□□ -0.95
CPSF6-202ENST00000435070 ERICH4A6NGS2 130 aa9.11□□□□□ -0.95
CPSF6-202ENST00000435070 RIOK3O14730 519 aaKnown RBP9.11□□□□□ -0.95
CPSF6-202ENST00000435070 U2SURPO15042 1029 aaKnown RBP9.11□□□□□ -0.95
CPSF6-202ENST00000435070 PIK3C2GO75747 1445 aa9.11□□□□□ -0.95
CPSF6-202ENST00000435070 PDS5BQ9NTI5 1447 aa9.11□□□□□ -0.95
CPSF6-202ENST00000435070 SPC24Q8NBT2 197 aa9.1□□□□□ -0.95
CPSF6-202ENST00000435070 MTHFSP49914 203 aa9.1□□□□□ -0.95
CPSF6-202ENST00000435070 CERS3Q8IU89 383 aa9.1□□□□□ -0.95
CPSF6-202ENST00000435070 IPO4Q8TEX9 1081 aaKnown RBP9.1□□□□□ -0.95
CPSF6-202ENST00000435070 ZDHHC9Q9Y397 364 aa9.1□□□□□ -0.95
CPSF6-202ENST00000435070 CUL7Q14999 1698 aa9.1□□□□□ -0.95
CPSF6-202ENST00000435070 PIBF1Q8WXW3 757 aa9.1□□□□□ -0.95
CPSF6-202ENST00000435070 CHAF1AQ13111 956 aaPredicted RBP9.1□□□□□ -0.95
CPSF6-202ENST00000435070 ADCY5O95622 1261 aa9.1□□□□□ -0.95
CPSF6-202ENST00000435070 WDR63Q8IWG1 891 aa9.1□□□□□ -0.95
CPSF6-202ENST00000435070 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
CPSF6-202ENST00000435070 A2MP01023 1474 aa9.09□□□□□ -0.95
CPSF6-202ENST00000435070 C9orf84Q5VXU9 1444 aa9.09□□□□□ -0.95
CPSF6-202ENST00000435070 ZBTB40Q9NUA8 1239 aa9.09□□□□□ -0.95
CPSF6-202ENST00000435070 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
CPSF6-202ENST00000435070 GPRASP1Q5JY77 1395 aa9.09□□□□□ -0.95
CPSF6-202ENST00000435070 ELL2O00472 640 aaPredicted RBP9.09□□□□□ -0.95
CPSF6-202ENST00000435070 NAA30Q147X3 362 aaPredicted RBP9.09□□□□□ -0.95
CPSF6-202ENST00000435070 PRDM2Q13029 1718 aa9.09□□□□□ -0.95
CPSF6-202ENST00000435070 CLEC17AQ6ZS10 378 aa9.09□□□□□ -0.95
CPSF6-202ENST00000435070 CC2D2AQ9P2K1 1620 aa9.09□□□□□ -0.95
CPSF6-202ENST00000435070 RABEP1Q15276 862 aa9.09□□□□□ -0.95
CPSF6-202ENST00000435070 ASXL1Q8IXJ9 1541 aa9.08□□□□□ -0.96
CPSF6-202ENST00000435070 CDC45O75419 566 aa9.08□□□□□ -0.96
CPSF6-202ENST00000435070 HCLS1P14317 486 aaPredicted RBP9.08□□□□□ -0.96
CPSF6-202ENST00000435070 AEBP1Q8IUX7 1158 aa9.08□□□□□ -0.96
CPSF6-202ENST00000435070 GADD45BO75293 160 aaPredicted RBP9.08□□□□□ -0.96
CPSF6-202ENST00000435070 GPATCH8Q9UKJ3 1502 aaKnown RBP9.07□□□□□ -0.96
CPSF6-202ENST00000435070 C16orf71Q8IYS4 520 aaPredicted RBP9.07□□□□□ -0.96
CPSF6-202ENST00000435070 KDM5DQ9BY66 1539 aa9.07□□□□□ -0.96
CPSF6-202ENST00000435070 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
CPSF6-202ENST00000435070 CYP2E1P05181 493 aaPredicted RBP9.07□□□□□ -0.96
CPSF6-202ENST00000435070 TAOK2Q9UL54 1235 aa9.07□□□□□ -0.96
CPSF6-202ENST00000435070 PLEKHD1A6NEE1 506 aa9.07□□□□□ -0.96
CPSF6-202ENST00000435070 NPHP1O15259 732 aa9.07□□□□□ -0.96
CPSF6-202ENST00000435070 ST18O60284 1047 aa9.07□□□□□ -0.96
CPSF6-202ENST00000435070 DTNBO60941 627 aa9.06□□□□□ -0.96
CPSF6-202ENST00000435070 IRX5P78411 483 aaPredicted RBP9.06□□□□□ -0.96
CPSF6-202ENST00000435070 PYCARDQ9ULZ3 195 aa9.06□□□□□ -0.96
CPSF6-202ENST00000435070 MBD3O95983 291 aa9.06□□□□□ -0.96
CPSF6-202ENST00000435070 ZBTB9Q96C00 473 aa9.06□□□□□ -0.96
CPSF6-202ENST00000435070 SLC12A5Q9H2X9 1139 aa9.06□□□□□ -0.96
CPSF6-202ENST00000435070 TNNT3P45378 269 aaPredicted RBP9.06□□□□□ -0.96
CPSF6-202ENST00000435070 DIAPH3Q9NSV4 1193 aa9.06□□□□□ -0.96
CPSF6-202ENST00000435070 NEK4P51957 841 aa9.05□□□□□ -0.96
CPSF6-202ENST00000435070 CFAP53Q96M91 514 aa9.05□□□□□ -0.96
CPSF6-202ENST00000435070 TRPM1Q7Z4N2 1603 aa9.05□□□□□ -0.96
CPSF6-202ENST00000435070 WDR62O43379 1518 aa9.05□□□□□ -0.96
CPSF6-202ENST00000435070 CLASP1Q7Z460 1538 aa9.05□□□□□ -0.96
CPSF6-202ENST00000435070 ABCC2Q92887 1545 aa9.05□□□□□ -0.96
CPSF6-202ENST00000435070 FKBP5Q13451 457 aaPredicted RBP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 GSPT1P15170 499 aaKnown RBP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 NCBP3Q53F19 620 aaKnown RBP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 IPO8O15397 1037 aaKnown RBP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 ZNF592Q92610 1267 aa9.05□□□□□ -0.96
CPSF6-202ENST00000435070 TROQ12816 1431 aaPredicted RBP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 OTUD7AQ8TE49 926 aaPredicted RBP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 SYAP1Q96A49 352 aaPredicted RBP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 CWC22Q9HCG8 908 aaKnown RBP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 V9GYY5 206 aaPredicted RBP9.05□□□□□ -0.96
CPSF6-202ENST00000435070 GTF2F1P35269 517 aaKnown RBP eCLIP9.04□□□□□ -0.96
CPSF6-202ENST00000435070 CFAP70Q5T0N1 1121 aa9.04□□□□□ -0.96
CPSF6-202ENST00000435070 C16orf45Q96MC5 204 aaPredicted RBP9.04□□□□□ -0.96
CPSF6-202ENST00000435070 NUP153P49790 1475 aaKnown RBP9.04□□□□□ -0.96
CPSF6-202ENST00000435070 DNMBPQ6XZF7 1577 aa9.04□□□□□ -0.96
CPSF6-202ENST00000435070 SCAPERQ9BY12 1400 aa9.04□□□□□ -0.96
CPSF6-202ENST00000435070 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.04□□□□□ -0.96
CPSF6-202ENST00000435070 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
CPSF6-202ENST00000435070 ZFP91Q96JP5 570 aaPredicted RBP9.04□□□□□ -0.96
CPSF6-202ENST00000435070 USP26Q9BXU7 913 aa9.04□□□□□ -0.96
CPSF6-202ENST00000435070 CEP170Q5SW79 1584 aa9.03□□□□□ -0.96
CPSF6-202ENST00000435070 PLA2R1Q13018 1463 aa9.03□□□□□ -0.96
CPSF6-202ENST00000435070 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
CPSF6-202ENST00000435070 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
CPSF6-202ENST00000435070 OGFRQ9NZT2 677 aa9.03□□□□□ -0.96
CPSF6-202ENST00000435070 ADGRL2O95490 1459 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms