RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 TFIP11Q9UBB9 837 aaKnown RBP7.73□□□□□ -1.17
HMGB3P10-201ENST00000434734 OATP04181 439 aa7.72□□□□□ -1.17
HMGB3P10-201ENST00000434734 NCLP19338 710 aaKnown RBP7.72□□□□□ -1.17
HMGB3P10-201ENST00000434734 DNAJB2P25686 324 aa7.72□□□□□ -1.17
HMGB3P10-201ENST00000434734 VAC14Q08AM6 782 aa7.72□□□□□ -1.17
HMGB3P10-201ENST00000434734 NAALADL2Q58DX5 795 aa7.72□□□□□ -1.17
HMGB3P10-201ENST00000434734 ZNF662Q6ZS27 426 aa7.72□□□□□ -1.17
HMGB3P10-201ENST00000434734 CCER1Q8TC90 406 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P10-201ENST00000434734 HIRIP3Q9BW71 556 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P10-201ENST00000434734 ZC3H4Q9UPT8 1303 aaKnown RBP7.72□□□□□ -1.17
HMGB3P10-201ENST00000434734 AP1G2O75843 785 aa7.71□□□□□ -1.18
HMGB3P10-201ENST00000434734 USP17L8P0C7I0 530 aa7.71□□□□□ -1.18
HMGB3P10-201ENST00000434734 GJD4Q96KN9 370 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P10-201ENST00000434734 BRPF3Q9ULD4 1205 aa7.71□□□□□ -1.18
HMGB3P10-201ENST00000434734 RGS20O76081 388 aa7.7□□□□□ -1.18
HMGB3P10-201ENST00000434734 CSPP1Q1MSJ5 1256 aa7.7□□□□□ -1.18
HMGB3P10-201ENST00000434734 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
HMGB3P10-201ENST00000434734 B4GALNT3Q6L9W6 998 aa7.7□□□□□ -1.18
HMGB3P10-201ENST00000434734 RIC3Q7Z5B4 369 aa7.7□□□□□ -1.18
HMGB3P10-201ENST00000434734 ALG2Q9H553 416 aa7.7□□□□□ -1.18
HMGB3P10-201ENST00000434734 TMEM134Q9H6X4 195 aa7.7□□□□□ -1.18
HMGB3P10-201ENST00000434734 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.69□□□□□ -1.18
HMGB3P10-201ENST00000434734 RECKO95980 971 aa7.69□□□□□ -1.18
HMGB3P10-201ENST00000434734 KCNC4Q03721 635 aa7.69□□□□□ -1.18
HMGB3P10-201ENST00000434734 QPCTQ16769 361 aa7.69□□□□□ -1.18
HMGB3P10-201ENST00000434734 NPAS4Q8IUM7 802 aa7.69□□□□□ -1.18
HMGB3P10-201ENST00000434734 PRR14Q9BWN1 585 aa7.69□□□□□ -1.18
HMGB3P10-201ENST00000434734 ZMIZ1Q9ULJ6 1067 aa7.69□□□□□ -1.18
HMGB3P10-201ENST00000434734 MAFBQ9Y5Q3 323 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P10-201ENST00000434734 A0A0G2JS52 829 aa7.68□□□□□ -1.18
HMGB3P10-201ENST00000434734 RNF40O75150 1001 aa7.68□□□□□ -1.18
HMGB3P10-201ENST00000434734 TAGLNQ01995 201 aaKnown RBP7.68□□□□□ -1.18
HMGB3P10-201ENST00000434734 TMEM164Q5U3C3 297 aa7.68□□□□□ -1.18
HMGB3P10-201ENST00000434734 STK32AQ8WU08 396 aa7.68□□□□□ -1.18
HMGB3P10-201ENST00000434734 NDUFB9Q9Y6M9 179 aa7.68□□□□□ -1.18
HMGB3P10-201ENST00000434734 RCCD1A6NED2 376 aa7.67□□□□□ -1.18
HMGB3P10-201ENST00000434734 SOWAHDA6NJG2 315 aa7.67□□□□□ -1.18
HMGB3P10-201ENST00000434734 WASHC4Q2M389 1173 aa7.67□□□□□ -1.18
HMGB3P10-201ENST00000434734 METTL3Q86U44 580 aaKnown RBP7.67□□□□□ -1.18
HMGB3P10-201ENST00000434734 PXYLP1Q8TE99 480 aa7.67□□□□□ -1.18
HMGB3P10-201ENST00000434734 ANKRD33BA6NCL7 494 aa7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 MARCH6O60337 910 aa7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 VAMP1P23763 118 aa7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 MARSP56192 900 aaKnown RBP7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 SF3A1Q15459 793 aaKnown RBP7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 RTL5Q5HYW3 569 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 TMED8Q6PL24 325 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 NOL8Q76FK4 1167 aaKnown RBP7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 PRR7Q8TB68 274 aa7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 SPIRE2Q8WWL2 714 aa7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 SLAIN2Q9P270 581 aa7.66□□□□□ -1.18
HMGB3P10-201ENST00000434734 SERPINB4P48594 390 aa7.65□□□□□ -1.18
HMGB3P10-201ENST00000434734 TBC1D9Q6ZT07 1266 aa7.65□□□□□ -1.18
HMGB3P10-201ENST00000434734 DPH6Q7L8W6 267 aa7.65□□□□□ -1.18
HMGB3P10-201ENST00000434734 SPTLC1O15269 473 aa7.64□□□□□ -1.19
HMGB3P10-201ENST00000434734 APLP1P51693 650 aa7.64□□□□□ -1.19
HMGB3P10-201ENST00000434734 TJAP1Q5JTD0 557 aa7.64□□□□□ -1.19
HMGB3P10-201ENST00000434734 CC2D2BQ6DHV5 1058 aa7.64□□□□□ -1.19
HMGB3P10-201ENST00000434734 PSMD1Q99460 953 aa7.64□□□□□ -1.19
HMGB3P10-201ENST00000434734 IL21Q9HBE4 155 aa7.64□□□□□ -1.19
HMGB3P10-201ENST00000434734 HMX1Q9NP08 348 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P10-201ENST00000434734 DIXDC1Q155Q3 683 aa7.63□□□□□ -1.19
HMGB3P10-201ENST00000434734 TUSC1Q2TAM9 212 aa7.63□□□□□ -1.19
HMGB3P10-201ENST00000434734 RSBN1LQ6PCB5 846 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P10-201ENST00000434734 ZNF526Q8TF50 670 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P10-201ENST00000434734 TRIM34Q9BYJ4 488 aa7.63□□□□□ -1.19
HMGB3P10-201ENST00000434734 LILRB3O75022 631 aa7.62□□□□□ -1.19
HMGB3P10-201ENST00000434734 MTRQ99707 1265 aa7.62□□□□□ -1.19
HMGB3P10-201ENST00000434734 PCDHB15Q9Y5E8 787 aa7.62□□□□□ -1.19
HMGB3P10-201ENST00000434734 MOXD2PA6NHM9 499 aa7.61□□□□□ -1.19
HMGB3P10-201ENST00000434734 SSFA2P28290 1259 aa7.61□□□□□ -1.19
HMGB3P10-201ENST00000434734 ARID4AP29374 1257 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P10-201ENST00000434734 KMT5BQ4FZB7 885 aa7.61□□□□□ -1.19
HMGB3P10-201ENST00000434734 CABLES1Q8TDN4 633 aa7.61□□□□□ -1.19
HMGB3P10-201ENST00000434734 SCNN1AP37088 669 aa7.6□□□□□ -1.19
HMGB3P10-201ENST00000434734 ELOAQ14241 798 aaKnown RBP7.6□□□□□ -1.19
HMGB3P10-201ENST00000434734 TSNAXIP1Q2TAA8 658 aa7.6□□□□□ -1.19
HMGB3P10-201ENST00000434734 ZNF326Q5BKZ1 582 aaKnown RBP7.6□□□□□ -1.19
HMGB3P10-201ENST00000434734 KANK4Q5T7N3 995 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P10-201ENST00000434734 FBXO33Q7Z6M2 555 aa7.6□□□□□ -1.19
HMGB3P10-201ENST00000434734 MICAL1Q8TDZ2 1067 aa7.6□□□□□ -1.19
HMGB3P10-201ENST00000434734 BIN2Q9UBW5 565 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P10-201ENST00000434734 NDUFV2P19404 249 aa7.59□□□□□ -1.19
HMGB3P10-201ENST00000434734 ERCC5P28715 1186 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P10-201ENST00000434734 TICAM2Q86XR7 235 aa7.59□□□□□ -1.19
HMGB3P10-201ENST00000434734 NOVA2Q9UNW9 492 aaKnown RBP7.59□□□□□ -1.19
HMGB3P10-201ENST00000434734 ACTN4O43707 911 aaKnown RBP7.58□□□□□ -1.2
HMGB3P10-201ENST00000434734 RAB11FIP3O75154 756 aa7.58□□□□□ -1.2
HMGB3P10-201ENST00000434734 DNAJC2Q99543 621 aaKnown RBP7.58□□□□□ -1.2
HMGB3P10-201ENST00000434734 PCDHB3Q9Y5E6 796 aa7.58□□□□□ -1.2
HMGB3P10-201ENST00000434734 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P10-201ENST00000434734 ATP9BO43861 1147 aa7.57□□□□□ -1.2
HMGB3P10-201ENST00000434734 CFHP08603 1231 aa7.57□□□□□ -1.2
HMGB3P10-201ENST00000434734 IRX6P78412 446 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P10-201ENST00000434734 TAF7LQ5H9L4 462 aa7.57□□□□□ -1.2
HMGB3P10-201ENST00000434734 C9orf131Q5VYM1 1079 aa7.57□□□□□ -1.2
HMGB3P10-201ENST00000434734 SULF1Q8IWU6 871 aa7.57□□□□□ -1.2
HMGB3P10-201ENST00000434734 GPATCH3Q96I76 525 aa7.57□□□□□ -1.2
HMGB3P10-201ENST00000434734 LNPKQ9C0E8 428 aa7.57□□□□□ -1.2
HMGB3P10-201ENST00000434734 PRDM16Q9HAZ2 1276 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms