RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 CDK19Q9BWU1 502 aa22■■□□□ 1.11
CSNK1E-208ENST00000431611 ALS2Q96Q42 1657 aa21.99■■□□□ 1.11
CSNK1E-208ENST00000431611 ATP7BP35670 1465 aa21.98■■□□□ 1.11
CSNK1E-208ENST00000431611 FAM98CQ17RN3 349 aaKnown RBP21.98■■□□□ 1.11
CSNK1E-208ENST00000431611 DEFB132Q7Z7B7 95 aa21.97■■□□□ 1.11
CSNK1E-208ENST00000431611 PRDM11Q9NQV5 511 aa21.97■■□□□ 1.11
CSNK1E-208ENST00000431611 ARHGEF28Q8N1W1 1705 aaKnown RBP21.97■■□□□ 1.11
CSNK1E-208ENST00000431611 CCDC61Q9Y6R9 512 aa21.95■■□□□ 1.1
CSNK1E-208ENST00000431611 COL14A1Q05707 1796 aaKnown RBP21.94■■□□□ 1.1
CSNK1E-208ENST00000431611 BRWD3Q6RI45 1802 aa21.94■■□□□ 1.1
CSNK1E-208ENST00000431611 NBPF1Q3BBV0 1214 aa21.94■■□□□ 1.1
CSNK1E-208ENST00000431611 ACEP12821 1306 aa21.93■■□□□ 1.1
CSNK1E-208ENST00000431611 SPATA31A5Q5VU36 1347 aa21.93■■□□□ 1.1
CSNK1E-208ENST00000431611 SPATA31A7Q8IWB4 1347 aa21.93■■□□□ 1.1
CSNK1E-208ENST00000431611 NRAPQ86VF7 1730 aa21.92■■□□□ 1.1
CSNK1E-208ENST00000431611 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
CSNK1E-208ENST00000431611 POLR3AO14802 1390 aaPredicted RBP21.91■■□□□ 1.1
CSNK1E-208ENST00000431611 KIAA0232Q92628 1395 aa21.91■■□□□ 1.1
CSNK1E-208ENST00000431611 PLEKHG3A1L390 1219 aa21.91■■□□□ 1.1
CSNK1E-208ENST00000431611 NUTM2GQ5VZR2 741 aa21.91■■□□□ 1.1
CSNK1E-208ENST00000431611 ITSN1Q15811 1721 aa21.91■■□□□ 1.1
CSNK1E-208ENST00000431611 KIAA1210Q9ULL0 1709 aa21.89■■□□□ 1.1
CSNK1E-208ENST00000431611 CHRNA2Q15822 529 aa21.89■■□□□ 1.09
CSNK1E-208ENST00000431611 ZC3H6P61129 1189 aaKnown RBP21.88■■□□□ 1.09
CSNK1E-208ENST00000431611 CRYBG1Q9Y4K1 1723 aa21.88■■□□□ 1.09
CSNK1E-208ENST00000431611 CENPJQ9HC77 1338 aaPredicted RBP21.87■■□□□ 1.09
CSNK1E-208ENST00000431611 BAG6P46379 1132 aa21.87■■□□□ 1.09
CSNK1E-208ENST00000431611 SRPK2P78362 688 aaKnown RBP21.87■■□□□ 1.09
CSNK1E-208ENST00000431611 STRN4Q9NRL3 753 aa21.87■■□□□ 1.09
CSNK1E-208ENST00000431611 SRCAPQ6ZRS2 3230 aa21.86■■□□□ 1.09
CSNK1E-208ENST00000431611 ABTB2Q8N961 1025 aa21.86■■□□□ 1.09
CSNK1E-208ENST00000431611 SPATA31A1Q5TZJ5 1347 aa21.85■■□□□ 1.09
CSNK1E-208ENST00000431611 FAM182BQ5T319 152 aa21.85■■□□□ 1.09
CSNK1E-208ENST00000431611 TOPAZ1Q8N9V7 1692 aa21.83■■□□□ 1.09
CSNK1E-208ENST00000431611 EVA1CP58658 441 aa21.83■■□□□ 1.09
CSNK1E-208ENST00000431611 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
CSNK1E-208ENST00000431611 PPIP5K1Q6PFW1 1433 aa21.82■■□□□ 1.08
CSNK1E-208ENST00000431611 L3MBTL2Q969R5 705 aa21.82■■□□□ 1.08
CSNK1E-208ENST00000431611 PHRF1Q9P1Y6 1649 aaKnown RBP21.81■■□□□ 1.08
CSNK1E-208ENST00000431611 NLRP13Q86W25 1043 aa21.81■■□□□ 1.08
CSNK1E-208ENST00000431611 USP35Q9P2H5 1018 aa21.8■■□□□ 1.08
CSNK1E-208ENST00000431611 USP19O94966 1318 aa21.8■■□□□ 1.08
CSNK1E-208ENST00000431611 THSD7AQ9UPZ6 1657 aa21.79■■□□□ 1.08
CSNK1E-208ENST00000431611 EN1Q05925 392 aaPredicted RBP21.79■■□□□ 1.08
CSNK1E-208ENST00000431611 CPDO75976 1380 aa21.78■■□□□ 1.08
CSNK1E-208ENST00000431611 CABP1Q9NZU7 370 aa21.78■■□□□ 1.08
CSNK1E-208ENST00000431611 SSH2Q76I76 1423 aa21.78■■□□□ 1.08
CSNK1E-208ENST00000431611 GCP02774 474 aa21.77■■□□□ 1.08
CSNK1E-208ENST00000431611 SIN3AQ96ST3 1273 aa21.77■■□□□ 1.08
CSNK1E-208ENST00000431611 BRD4O60885 1362 aaPredicted RBP21.76■■□□□ 1.07
CSNK1E-208ENST00000431611 PSDA5PKW4 1024 aaPredicted RBP21.76■■□□□ 1.07
CSNK1E-208ENST00000431611 FAM196AQ6ZSG2 479 aa21.76■■□□□ 1.07
CSNK1E-208ENST00000431611 BARGINQ6ZT62 677 aa21.76■■□□□ 1.07
CSNK1E-208ENST00000431611 NRKQ7Z2Y5 1582 aa21.76■■□□□ 1.07
CSNK1E-208ENST00000431611 LARP1Q6PKG0 1096 aaKnown RBP21.75■■□□□ 1.07
CSNK1E-208ENST00000431611 CAMTA1Q9Y6Y1 1673 aa21.75■■□□□ 1.07
CSNK1E-208ENST00000431611 TRIM37O94972 964 aa21.73■■□□□ 1.07
CSNK1E-208ENST00000431611 NLRP6P59044 892 aa21.73■■□□□ 1.07
CSNK1E-208ENST00000431611 PDE3BQ13370 1112 aa21.73■■□□□ 1.07
CSNK1E-208ENST00000431611 NEUROD1Q13562 356 aa21.73■■□□□ 1.07
CSNK1E-208ENST00000431611 TCP11L2Q8N4U5 519 aa21.73■■□□□ 1.07
CSNK1E-208ENST00000431611 EVC2Q86UK5 1308 aa21.73■■□□□ 1.07
CSNK1E-208ENST00000431611 DISP2A7MBM2 1401 aa21.72■■□□□ 1.07
CSNK1E-208ENST00000431611 USP6P35125 1406 aa21.72■■□□□ 1.07
CSNK1E-208ENST00000431611 RGPD1P0DJD0 1748 aa21.72■■□□□ 1.07
CSNK1E-208ENST00000431611 THRAP3Q9Y2W1 955 aaKnown RBP21.71■■□□□ 1.07
CSNK1E-208ENST00000431611 QRICH2Q9H0J4 1663 aa21.71■■□□□ 1.07
CSNK1E-208ENST00000431611 ZBTB7CA1YPR0 619 aa21.7■■□□□ 1.06
CSNK1E-208ENST00000431611 EZH2Q15910 746 aaKnown RBP21.7■■□□□ 1.06
CSNK1E-208ENST00000431611 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
CSNK1E-208ENST00000431611 LMO7Q8WWI1 1683 aa21.69■■□□□ 1.06
CSNK1E-208ENST00000431611 APBA3O96018 575 aa21.68■■□□□ 1.06
CSNK1E-208ENST00000431611 R3HDM1Q15032 1099 aaKnown RBP21.68■■□□□ 1.06
CSNK1E-208ENST00000431611 COL5A2P05997 1499 aaPredicted RBP21.67■■□□□ 1.06
CSNK1E-208ENST00000431611 CAMKK2Q96RR4 588 aa21.67■■□□□ 1.06
CSNK1E-208ENST00000431611 AATKQ6ZMQ8 1374 aa21.66■■□□□ 1.06
CSNK1E-208ENST00000431611 ZNF692Q9BU19 519 aaPredicted RBP21.66■■□□□ 1.06
CSNK1E-208ENST00000431611 TRPM1Q7Z4N2 1603 aa21.66■■□□□ 1.06
CSNK1E-208ENST00000431611 CRB1P82279 1406 aa21.64■■□□□ 1.06
CSNK1E-208ENST00000431611 TNS1Q9HBL0 1735 aaKnown RBP21.64■■□□□ 1.06
CSNK1E-208ENST00000431611 LRP5O75197 1615 aa21.64■■□□□ 1.05
CSNK1E-208ENST00000431611 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
CSNK1E-208ENST00000431611 SLIT3O75094 1523 aa21.63■■□□□ 1.05
CSNK1E-208ENST00000431611 TTC21BQ7Z4L5 1316 aa21.62■■□□□ 1.05
CSNK1E-208ENST00000431611 TOM1L2Q6ZVM7 507 aa21.61■■□□□ 1.05
CSNK1E-208ENST00000431611 C11orf95C9JLR9 678 aaPredicted RBP21.6■■□□□ 1.05
CSNK1E-208ENST00000431611 KCNH5Q8NCM2 988 aa21.6■■□□□ 1.05
CSNK1E-208ENST00000431611 TTC21AQ8NDW8 1320 aa21.59■■□□□ 1.05
CSNK1E-208ENST00000431611 AXIN2Q9Y2T1 843 aa21.59■■□□□ 1.05
CSNK1E-208ENST00000431611 SOX12O15370 315 aa21.58■■□□□ 1.05
CSNK1E-208ENST00000431611 ARHGEF25Q86VW2 580 aa21.58■■□□□ 1.05
CSNK1E-208ENST00000431611 PIK3C2AO00443 1686 aa21.58■■□□□ 1.05
CSNK1E-208ENST00000431611 WDR17Q8IZU2 1322 aa21.57■■□□□ 1.04
CSNK1E-208ENST00000431611 DDB1Q16531 1140 aa21.57■■□□□ 1.04
CSNK1E-208ENST00000431611 CPSF1Q10570 1443 aaKnown RBP21.56■■□□□ 1.04
CSNK1E-208ENST00000431611 NBPF14Q5TI25 921 aa21.56■■□□□ 1.04
CSNK1E-208ENST00000431611 KTN1Q86UP2 1357 aaKnown RBP21.56■■□□□ 1.04
CSNK1E-208ENST00000431611 CARD11Q9BXL7 1154 aa21.55■■□□□ 1.04
CSNK1E-208ENST00000431611 PARP4Q9UKK3 1724 aaKnown RBP21.55■■□□□ 1.04
CSNK1E-208ENST00000431611 OVOS2A0A0G2JMS6 1433 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms