RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ZBBXA8MT70 800 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 CCNYL3P0C7X3 344 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 KCNH2Q12809 1159 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 PNMA1Q8ND90 353 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 GPKOWQ92917 476 aaPredicted RBP eCLIP5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 STAC3Q96MF2 364 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 SPSB2Q99619 263 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 PRDM9Q9NQV7 894 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 GPSM3Q9Y4H4 160 aa5.87□□□□□ -1.47
HMGB1P27-201ENST00000431429 ZPR1O75312 459 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 ADH1BP00325 375 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 TJAP1Q5JTD0 557 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 PODXL2Q9NZ53 605 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 MYT1LQ9UL68 1186 aa5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 MAFBQ9Y5Q3 323 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P27-201ENST00000431429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 EIF4G2P78344 907 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 PDXDC2PQ6P474 469 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 TBC1D9Q6ZT07 1266 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 NFATC2IPQ8NCF5 419 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 NUDT12Q9BQG2 462 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 TFIP11Q9UBB9 837 aaKnown RBP5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 USTQ9Y2C2 406 aa5.85□□□□□ -1.47
HMGB1P27-201ENST00000431429 ATP9BO43861 1147 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 TLL1O43897 1013 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 ATG7O95352 703 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 COPS2P61201 443 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 SEMA3FQ13275 785 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 MTRQ99707 1265 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 CHIC2Q9UKJ5 165 aa5.84□□□□□ -1.47
HMGB1P27-201ENST00000431429 KANK4Q5T7N3 995 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 SH3BP5LQ7L8J4 393 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 SH3RF1Q7Z6J0 888 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 PHTF2Q8N3S3 785 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 KCTD17Q8N5Z5 321 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 ARMC2Q8NEN0 867 aa5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 KCTD12Q96CX2 325 aaKnown RBP5.83□□□□□ -1.48
HMGB1P27-201ENST00000431429 TMEM88BA6NKF7 163 aa5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 PIK3CDO00329 1044 aa5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 LMOD1P29536 600 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 PTCRAQ6ISU1 281 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 PLEKHM2Q8IWE5 1019 aa5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 IL21Q9HBE4 155 aa5.82□□□□□ -1.48
HMGB1P27-201ENST00000431429 MCCD1P59942 119 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 ELOAQ14241 798 aaKnown RBP5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 NBPF14Q5TI25 921 aa5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 FAM174AQ8TBP5 190 aa5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 ZNF516Q92618 1163 aa5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 UNC93B1Q9H1C4 597 aa5.81□□□□□ -1.48
HMGB1P27-201ENST00000431429 ACIN1Q9UKV3 1341 aaKnown RBP5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 RFX1P22670 979 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 CTHP32929 405 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 PTK2Q05397 1052 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 PDE4CQ08493 712 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 CEP126Q9P2H0 1117 aa5.8□□□□□ -1.48
HMGB1P27-201ENST00000431429 SLC6A16Q9GZN6 736 aa5.79□□□□□ -1.48
HMGB1P27-201ENST00000431429 ZBTB7CA1YPR0 619 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L3A6NCW0 530 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L4A6NCW7 530 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 TRAF7Q6Q0C0 670 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L2Q6R6M4 530 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L1Q7RTZ2 530 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 CDAN1Q8IWY9 1227 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 ADAM32Q8TC27 787 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 ZNF592Q92610 1267 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 C1QTNF2Q9BXJ5 285 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 ZMIZ1Q9ULJ6 1067 aa5.78□□□□□ -1.48
HMGB1P27-201ENST00000431429 USP17L5A8MUK1 530 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 BRD1O95696 1058 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 ITGBL1O95965 494 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 POTEGQ6S5H5 508 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 NKX2-3Q8TAU0 364 aa5.77□□□□□ -1.49
HMGB1P27-201ENST00000431429 FAM196BA6NMK8 535 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 LZTS3O60299 673 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 S1PR4O95977 384 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 CSB-PGBD3P0DP91 1061 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 ARHGAP9Q9BRR9 750 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 VRTNQ9H8Y1 702 aa5.76□□□□□ -1.49
HMGB1P27-201ENST00000431429 DKK1O94907 266 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 SKIP12755 728 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 PTPN5P54829 565 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 KCNA1Q09470 495 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 ERFEQ4G0M1 354 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 TRMT44Q8IYL2 757 aaKnown RBP5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 ZNF511Q8NB15 262 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 PLPP7Q8NBV4 271 aa5.75□□□□□ -1.49
HMGB1P27-201ENST00000431429 CARNS1A5YM72 827 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 ESPNB1AK53 854 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 FAM69CQ0P6D2 419 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 PTK7Q13308 1070 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 MAP7D1Q3KQU3 841 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 CRTC2Q53ET0 693 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 BAP1Q92560 729 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 FCF1Q9Y324 198 aaKnown RBP5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 PCDHB9Q9Y5E1 797 aa5.74□□□□□ -1.49
HMGB1P27-201ENST00000431429 USP17L15C9J2P7 530 aa5.73□□□□□ -1.49
HMGB1P27-201ENST00000431429 PATL2C9JE40 543 aaKnown RBP5.73□□□□□ -1.49
HMGB1P27-201ENST00000431429 USP17L10C9JJH3 530 aa5.73□□□□□ -1.49
HMGB1P27-201ENST00000431429 USP17L13C9JLJ4 530 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms