RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PPIP5K1Q6PFW1 1433 aa24.85■■□□□ 1.57
HMGN1-206ENST00000431390 A0A1W2PP64 1363 aa24.85■■□□□ 1.57
HMGN1-206ENST00000431390 PARD3Q8TEW0 1356 aa24.85■■□□□ 1.57
HMGN1-206ENST00000431390 AMER1Q5JTC6 1135 aaPredicted RBP24.84■■□□□ 1.57
HMGN1-206ENST00000431390 CABP1Q9NZU7 370 aa24.84■■□□□ 1.57
HMGN1-206ENST00000431390 NSD3Q9BZ95 1437 aa24.84■■□□□ 1.57
HMGN1-206ENST00000431390 ANKARQ7Z5J8 1434 aa24.84■■□□□ 1.57
HMGN1-206ENST00000431390 C8orf37Q96NL8 207 aa24.84■■□□□ 1.57
HMGN1-206ENST00000431390 PRR36Q9H6K5 1346 aa24.83■■□□□ 1.57
HMGN1-206ENST00000431390 RGS12O14924 1447 aa24.83■■□□□ 1.57
HMGN1-206ENST00000431390 HDGFL2Q7Z4V5 671 aaPredicted RBP24.82■■□□□ 1.56
HMGN1-206ENST00000431390 AKAP12Q02952 1782 aa24.81■■□□□ 1.56
HMGN1-206ENST00000431390 C1orf167Q5SNV9 1468 aa24.8■■□□□ 1.56
HMGN1-206ENST00000431390 CPSF1Q10570 1443 aaKnown RBP24.79■■□□□ 1.56
HMGN1-206ENST00000431390 CC2D1BQ5T0F9 858 aaKnown RBP24.79■■□□□ 1.56
HMGN1-206ENST00000431390 MON2Q7Z3U7 1717 aa24.78■■□□□ 1.56
HMGN1-206ENST00000431390 RGPD8O14715 1765 aaPredicted RBP24.78■■□□□ 1.56
HMGN1-206ENST00000431390 QTRT2Q9H974 415 aaKnown RBP24.78■■□□□ 1.56
HMGN1-206ENST00000431390 CGNL1Q0VF96 1302 aa24.77■■□□□ 1.56
HMGN1-206ENST00000431390 CNGB1Q14028 1251 aaPredicted RBP24.77■■□□□ 1.56
HMGN1-206ENST00000431390 MYBBP1AQ9BQG0 1328 aaKnown RBP24.77■■□□□ 1.56
HMGN1-206ENST00000431390 NSD2O96028 1365 aa24.76■■□□□ 1.55
HMGN1-206ENST00000431390 PLEKHG3A1L390 1219 aa24.76■■□□□ 1.55
HMGN1-206ENST00000431390 RBM6P78332 1123 aaKnown RBP24.76■■□□□ 1.55
HMGN1-206ENST00000431390 ADAMTS2O95450 1211 aa24.75■■□□□ 1.55
HMGN1-206ENST00000431390 ZNF692Q9BU19 519 aaPredicted RBP24.74■■□□□ 1.55
HMGN1-206ENST00000431390 EDC4Q6P2E9 1401 aaKnown RBP24.73■■□□□ 1.55
HMGN1-206ENST00000431390 ANKRD26Q9UPS8 1709 aa24.72■■□□□ 1.55
HMGN1-206ENST00000431390 NUTM2FA1L443 756 aa24.72■■□□□ 1.55
HMGN1-206ENST00000431390 NGLY1Q96IV0 654 aa24.72■■□□□ 1.55
HMGN1-206ENST00000431390 KIF20BQ96Q89 1820 aa24.72■■□□□ 1.55
HMGN1-206ENST00000431390 ORAI2Q96SN7 254 aa24.71■■□□□ 1.55
HMGN1-206ENST00000431390 POLR3AO14802 1390 aaPredicted RBP24.7■■□□□ 1.54
HMGN1-206ENST00000431390 BRD4O60885 1362 aaPredicted RBP24.7■■□□□ 1.54
HMGN1-206ENST00000431390 SOS2Q07890 1332 aaPredicted RBP24.69■■□□□ 1.54
HMGN1-206ENST00000431390 NRKQ7Z2Y5 1582 aa24.69■■□□□ 1.54
HMGN1-206ENST00000431390 COL22A1Q8NFW1 1626 aaPredicted RBP24.69■■□□□ 1.54
HMGN1-206ENST00000431390 ACEP12821 1306 aa24.69■■□□□ 1.54
HMGN1-206ENST00000431390 NLRP13Q86W25 1043 aa24.68■■□□□ 1.54
HMGN1-206ENST00000431390 MRS2Q9HD23 443 aa24.67■■□□□ 1.54
HMGN1-206ENST00000431390 CCDC184Q52MB2 194 aa24.66■■□□□ 1.54
HMGN1-206ENST00000431390 USP6P35125 1406 aa24.66■■□□□ 1.54
HMGN1-206ENST00000431390 MARF1Q9Y4F3 1742 aaKnown RBP24.65■■□□□ 1.54
HMGN1-206ENST00000431390 USP21Q9UK80 565 aa24.65■■□□□ 1.54
HMGN1-206ENST00000431390 FYB1O15117 783 aa24.63■■□□□ 1.53
HMGN1-206ENST00000431390 MORC1Q86VD1 984 aa24.63■■□□□ 1.53
HMGN1-206ENST00000431390 PPP2R1AP30153 589 aa24.63■■□□□ 1.53
HMGN1-206ENST00000431390 NGDNQ8NEJ9 315 aaKnown RBP24.62■■□□□ 1.53
HMGN1-206ENST00000431390 PMFBP1Q8TBY8 1022 aa24.62■■□□□ 1.53
HMGN1-206ENST00000431390 PHF8Q9UPP1 1060 aa24.62■■□□□ 1.53
HMGN1-206ENST00000431390 SSH2Q76I76 1423 aa24.61■■□□□ 1.53
HMGN1-206ENST00000431390 TRPC5Q9UL62 973 aaPredicted RBP24.61■■□□□ 1.53
HMGN1-206ENST00000431390 KIF1AQ12756 1690 aa24.61■■□□□ 1.53
HMGN1-206ENST00000431390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.59■■□□□ 1.53
HMGN1-206ENST00000431390 ATRNO75882 1429 aa24.59■■□□□ 1.53
HMGN1-206ENST00000431390 FNBP4Q8N3X1 1017 aaPredicted RBP24.59■■□□□ 1.53
HMGN1-206ENST00000431390 GGNBP2Q9H3C7 697 aa24.59■■□□□ 1.53
HMGN1-206ENST00000431390 TTC21BQ7Z4L5 1316 aa24.58■■□□□ 1.53
HMGN1-206ENST00000431390 PXDNQ92626 1479 aa24.58■■□□□ 1.52
HMGN1-206ENST00000431390 ESCO1Q5FWF5 840 aa24.57■■□□□ 1.52
HMGN1-206ENST00000431390 TTC21AQ8NDW8 1320 aa24.57■■□□□ 1.52
HMGN1-206ENST00000431390 NPHP3Q7Z494 1330 aa24.55■■□□□ 1.52
HMGN1-206ENST00000431390 XPCQ01831 940 aaPredicted RBP24.54■■□□□ 1.52
HMGN1-206ENST00000431390 NME9Q86XW9 330 aa24.53■■□□□ 1.52
HMGN1-206ENST00000431390 PNISRQ8TF01 805 aaKnown RBP24.52■■□□□ 1.52
HMGN1-206ENST00000431390 YTHDC1Q96MU7 727 aaKnown RBP24.52■■□□□ 1.52
HMGN1-206ENST00000431390 BCL9LQ86UU0 1499 aa24.52■■□□□ 1.52
HMGN1-206ENST00000431390 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.51■■□□□ 1.51
HMGN1-206ENST00000431390 USP54Q70EL1 1684 aa24.51■■□□□ 1.51
HMGN1-206ENST00000431390 FOXO3O43524 673 aa24.5■■□□□ 1.51
HMGN1-206ENST00000431390 COG3Q96JB2 828 aa24.5■■□□□ 1.51
HMGN1-206ENST00000431390 PIK3C2AO00443 1686 aa24.5■■□□□ 1.51
HMGN1-206ENST00000431390 OVOS2A0A0J9YW53 1432 aa24.5■■□□□ 1.51
HMGN1-206ENST00000431390 OVOS2Q6IE36 1432 aa24.5■■□□□ 1.51
HMGN1-206ENST00000431390 TNNT2P45379 298 aaPredicted RBP24.49■■□□□ 1.51
HMGN1-206ENST00000431390 FAM9BQ8IZU0 186 aa24.49■■□□□ 1.51
HMGN1-206ENST00000431390 USP31Q70CQ4 1352 aa24.49■■□□□ 1.51
HMGN1-206ENST00000431390 EP400Q96L91 3159 aa24.49■■□□□ 1.51
HMGN1-206ENST00000431390 PSME1Q06323 249 aa24.46■■□□□ 1.51
HMGN1-206ENST00000431390 AATKQ6ZMQ8 1374 aa24.46■■□□□ 1.51
HMGN1-206ENST00000431390 MAP2P11137 1827 aaKnown RBP24.45■■□□□ 1.51
HMGN1-206ENST00000431390 TRPM3Q9HCF6 1732 aaPredicted RBP24.45■■□□□ 1.5
HMGN1-206ENST00000431390 ZRANB1Q9UGI0 708 aa24.45■■□□□ 1.5
HMGN1-206ENST00000431390 MTHFSP49914 203 aa24.44■■□□□ 1.5
HMGN1-206ENST00000431390 GLI3P10071 1580 aa24.44■■□□□ 1.5
HMGN1-206ENST00000431390 INSRP06213 1382 aa24.43■■□□□ 1.5
HMGN1-206ENST00000431390 BRWD3Q6RI45 1802 aa24.43■■□□□ 1.5
HMGN1-206ENST00000431390 GJD4Q96KN9 370 aaPredicted RBP24.43■■□□□ 1.5
HMGN1-206ENST00000431390 SRCAPQ6ZRS2 3230 aa24.42■■□□□ 1.5
HMGN1-206ENST00000431390 SMG6Q86US8 1419 aaKnown RBP24.42■■□□□ 1.5
HMGN1-206ENST00000431390 CFAP53Q96M91 514 aa24.42■■□□□ 1.5
HMGN1-206ENST00000431390 SLIT2O94813 1529 aa24.4■■□□□ 1.5
HMGN1-206ENST00000431390 PAK3O75914 559 aaPredicted RBP24.39■■□□□ 1.5
HMGN1-206ENST00000431390 KRT28Q7Z3Y7 464 aa24.38■■□□□ 1.49
HMGN1-206ENST00000431390 CCDC125Q86Z20 511 aa24.38■■□□□ 1.49
HMGN1-206ENST00000431390 ABTB2Q8N961 1025 aa24.38■■□□□ 1.49
HMGN1-206ENST00000431390 SPATA31A3Q5VYP0 1347 aa24.38■■□□□ 1.49
HMGN1-206ENST00000431390 POLKQ9UBT6 870 aa24.37■■□□□ 1.49
HMGN1-206ENST00000431390 NLRP6P59044 892 aa24.37■■□□□ 1.49
HMGN1-206ENST00000431390 WDR43Q15061 677 aaKnown RBP eCLIP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms