RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 AKAP12Q02952 1782 aa18.95■□□□□ 0.62
CALD1-207ENST00000430085 TOPAZ1Q8N9V7 1692 aa18.95■□□□□ 0.62
CALD1-207ENST00000430085 MON2Q7Z3U7 1717 aa18.95■□□□□ 0.62
CALD1-207ENST00000430085 PROSER2Q86WR7 435 aaPredicted RBP18.95■□□□□ 0.62
CALD1-207ENST00000430085 CCDC146Q8IYE0 955 aa18.95■□□□□ 0.62
CALD1-207ENST00000430085 NUTM2FA1L443 756 aa18.94■□□□□ 0.62
CALD1-207ENST00000430085 TMEM94Q12767 1356 aa18.92■□□□□ 0.62
CALD1-207ENST00000430085 PLEKHG3A1L390 1219 aa18.92■□□□□ 0.62
CALD1-207ENST00000430085 ACEP12821 1306 aa18.9■□□□□ 0.62
CALD1-207ENST00000430085 NALCNQ8IZF0 1738 aa18.9■□□□□ 0.62
CALD1-207ENST00000430085 NME9Q86XW9 330 aa18.9■□□□□ 0.62
CALD1-207ENST00000430085 APAF1O14727 1248 aa18.89■□□□□ 0.61
CALD1-207ENST00000430085 NGEFQ8N5V2 710 aa18.88■□□□□ 0.61
CALD1-207ENST00000430085 CDCA7LQ96GN5 454 aa18.88■□□□□ 0.61
CALD1-207ENST00000430085 COG3Q96JB2 828 aa18.88■□□□□ 0.61
CALD1-207ENST00000430085 IRX6P78412 446 aaPredicted RBP18.88■□□□□ 0.61
CALD1-207ENST00000430085 CERKQ8TCT0 537 aa18.87■□□□□ 0.61
CALD1-207ENST00000430085 RUNDC1Q96C34 613 aa18.86■□□□□ 0.61
CALD1-207ENST00000430085 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
CALD1-207ENST00000430085 NRKQ7Z2Y5 1582 aa18.86■□□□□ 0.61
CALD1-207ENST00000430085 USP6P35125 1406 aa18.86■□□□□ 0.61
CALD1-207ENST00000430085 U2AF1L5P0DN76 240 aaPredicted RBP18.86■□□□□ 0.61
CALD1-207ENST00000430085 U2AF1Q01081 240 aaKnown RBP eCLIP18.86■□□□□ 0.61
CALD1-207ENST00000430085 C14orf37Q86TY3 774 aa18.86■□□□□ 0.61
CALD1-207ENST00000430085 COL3A1P02461 1466 aaPredicted RBP18.85■□□□□ 0.61
CALD1-207ENST00000430085 TTC21BQ7Z4L5 1316 aa18.85■□□□□ 0.61
CALD1-207ENST00000430085 ZNF521Q96K83 1311 aa18.85■□□□□ 0.61
CALD1-207ENST00000430085 NCOA3Q9Y6Q9 1424 aa18.85■□□□□ 0.61
CALD1-207ENST00000430085 GOLGA2Q08379 1002 aa18.84■□□□□ 0.61
CALD1-207ENST00000430085 FMN2Q9NZ56 1722 aa18.84■□□□□ 0.61
CALD1-207ENST00000430085 ERICH6BQ5W0A0 696 aa18.84■□□□□ 0.61
CALD1-207ENST00000430085 NGDNQ8NEJ9 315 aaKnown RBP18.84■□□□□ 0.61
CALD1-207ENST00000430085 PMFBP1Q8TBY8 1022 aa18.84■□□□□ 0.61
CALD1-207ENST00000430085 RGPD8O14715 1765 aaPredicted RBP18.84■□□□□ 0.61
CALD1-207ENST00000430085 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.61
CALD1-207ENST00000430085 PNPLA6Q8IY17 1366 aa18.83■□□□□ 0.6
CALD1-207ENST00000430085 U2SURPO15042 1029 aaKnown RBP18.83■□□□□ 0.6
CALD1-207ENST00000430085 PPM1GO15355 546 aaPredicted RBP18.83■□□□□ 0.6
CALD1-207ENST00000430085 DIAPH1O60610 1272 aaKnown RBP18.83■□□□□ 0.6
CALD1-207ENST00000430085 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
CALD1-207ENST00000430085 ZRANB1Q9UGI0 708 aa18.83■□□□□ 0.6
CALD1-207ENST00000430085 IQSEC2Q5JU85 1478 aa18.82■□□□□ 0.6
CALD1-207ENST00000430085 AATKQ6ZMQ8 1374 aa18.82■□□□□ 0.6
CALD1-207ENST00000430085 MSH6P52701 1360 aa18.82■□□□□ 0.6
CALD1-207ENST00000430085 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
CALD1-207ENST00000430085 MAP2P11137 1827 aaKnown RBP18.81■□□□□ 0.6
CALD1-207ENST00000430085 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
CALD1-207ENST00000430085 C19orf44Q9H6X5 657 aa18.8■□□□□ 0.6
CALD1-207ENST00000430085 TTC21AQ8NDW8 1320 aa18.8■□□□□ 0.6
CALD1-207ENST00000430085 FBLN1P23142 703 aa18.8■□□□□ 0.6
CALD1-207ENST00000430085 TCP11L2Q8N4U5 519 aa18.8■□□□□ 0.6
CALD1-207ENST00000430085 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
CALD1-207ENST00000430085 SSH2Q76I76 1423 aa18.78■□□□□ 0.6
CALD1-207ENST00000430085 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
CALD1-207ENST00000430085 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
CALD1-207ENST00000430085 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
CALD1-207ENST00000430085 NEUROD2Q15784 382 aa18.77■□□□□ 0.6
CALD1-207ENST00000430085 OVOS2A0A0J9YW53 1432 aa18.77■□□□□ 0.6
CALD1-207ENST00000430085 OVOS2Q6IE36 1432 aa18.77■□□□□ 0.6
CALD1-207ENST00000430085 SLFN5Q08AF3 891 aa18.76■□□□□ 0.59
CALD1-207ENST00000430085 DUSP27Q5VZP5 1158 aa18.76■□□□□ 0.59
CALD1-207ENST00000430085 ATF3P18847 181 aa18.76■□□□□ 0.59
CALD1-207ENST00000430085 WWC1Q8IX03 1113 aa18.76■□□□□ 0.59
CALD1-207ENST00000430085 RRP7AQ9Y3A4 280 aaKnown RBP18.76■□□□□ 0.59
CALD1-207ENST00000430085 MAPK8IP3Q9UPT6 1336 aa18.76■□□□□ 0.59
CALD1-207ENST00000430085 DCCP43146 1447 aa18.76■□□□□ 0.59
CALD1-207ENST00000430085 E9PSI1 815 aa18.75■□□□□ 0.59
CALD1-207ENST00000430085 RRS1Q15050 365 aaKnown RBP18.75■□□□□ 0.59
CALD1-207ENST00000430085 RRP1P56182 461 aaKnown RBP18.74■□□□□ 0.59
CALD1-207ENST00000430085 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
CALD1-207ENST00000430085 UBAP1LF5GYI3 381 aa18.73■□□□□ 0.59
CALD1-207ENST00000430085 CCDC27Q2M243 656 aa18.73■□□□□ 0.59
CALD1-207ENST00000430085 CADPS2Q86UW7 1296 aa18.73■□□□□ 0.59
CALD1-207ENST00000430085 PLEKHF1Q96S99 279 aa18.73■□□□□ 0.59
CALD1-207ENST00000430085 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
CALD1-207ENST00000430085 PHF8Q9UPP1 1060 aa18.73■□□□□ 0.59
CALD1-207ENST00000430085 TRMT2AQ8IZ69 625 aaKnown RBP18.72■□□□□ 0.59
CALD1-207ENST00000430085 USP31Q70CQ4 1352 aa18.72■□□□□ 0.59
CALD1-207ENST00000430085 FCHSD2O94868 740 aa18.72■□□□□ 0.59
CALD1-207ENST00000430085 MST1RQ04912 1400 aa18.71■□□□□ 0.59
CALD1-207ENST00000430085 NEFMP07197 916 aa18.71■□□□□ 0.59
CALD1-207ENST00000430085 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
CALD1-207ENST00000430085 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
CALD1-207ENST00000430085 TOM1O60784 492 aa18.7■□□□□ 0.58
CALD1-207ENST00000430085 IL13P35225 146 aa18.7■□□□□ 0.58
CALD1-207ENST00000430085 WDR63Q8IWG1 891 aa18.7■□□□□ 0.58
CALD1-207ENST00000430085 PIK3C2AO00443 1686 aa18.69■□□□□ 0.58
CALD1-207ENST00000430085 ESCO1Q5FWF5 840 aa18.69■□□□□ 0.58
CALD1-207ENST00000430085 SLAIN2Q9P270 581 aa18.69■□□□□ 0.58
CALD1-207ENST00000430085 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
CALD1-207ENST00000430085 SOX12O15370 315 aa18.68■□□□□ 0.58
CALD1-207ENST00000430085 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
CALD1-207ENST00000430085 TMPOP42166 694 aaKnown RBP18.68■□□□□ 0.58
CALD1-207ENST00000430085 NLRP6P59044 892 aa18.67■□□□□ 0.58
CALD1-207ENST00000430085 PIP4K2BP78356 416 aa18.67■□□□□ 0.58
CALD1-207ENST00000430085 RSPH6AQ9H0K4 717 aa18.67■□□□□ 0.58
CALD1-207ENST00000430085 ROBO1Q9Y6N7 1651 aa18.67■□□□□ 0.58
CALD1-207ENST00000430085 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
CALD1-207ENST00000430085 HMOX1P09601 288 aa18.66■□□□□ 0.58
CALD1-207ENST00000430085 ABTB2Q8N961 1025 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms