RNA–Protein interactions for RNA: ENST00000429907.5

RPE-205, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-205ENST00000429907 ESCO1Q5FWF5 840 aa11.32□□□□□ -0.6
RPE-205ENST00000429907 COL22A1Q8NFW1 1626 aaPredicted RBP11.31□□□□□ -0.6
RPE-205ENST00000429907 PNPLA6Q8IY17 1366 aa11.31□□□□□ -0.6
RPE-205ENST00000429907 MNX1P50219 401 aaPredicted RBP11.31□□□□□ -0.6
RPE-205ENST00000429907 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
RPE-205ENST00000429907 XPCQ01831 940 aaPredicted RBP11.3□□□□□ -0.6
RPE-205ENST00000429907 HIRIP3Q9BW71 556 aaPredicted RBP11.3□□□□□ -0.6
RPE-205ENST00000429907 TOPAZ1Q8N9V7 1692 aa11.3□□□□□ -0.6
RPE-205ENST00000429907 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
RPE-205ENST00000429907 STAC3Q96MF2 364 aa11.29□□□□□ -0.6
RPE-205ENST00000429907 TRPM3Q9HCF6 1732 aaPredicted RBP11.29□□□□□ -0.6
RPE-205ENST00000429907 PXDNQ92626 1479 aa11.28□□□□□ -0.6
RPE-205ENST00000429907 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
RPE-205ENST00000429907 TULP4Q9NRJ4 1543 aa11.27□□□□□ -0.61
RPE-205ENST00000429907 FOXO3O43524 673 aa11.27□□□□□ -0.61
RPE-205ENST00000429907 PLEKHG5O94827 1062 aa11.27□□□□□ -0.61
RPE-205ENST00000429907 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
RPE-205ENST00000429907 QTRT2Q9H974 415 aaKnown RBP11.27□□□□□ -0.61
RPE-205ENST00000429907 NPHP3Q7Z494 1330 aa11.27□□□□□ -0.61
RPE-205ENST00000429907 PLCH1Q4KWH8 1693 aa11.27□□□□□ -0.61
RPE-205ENST00000429907 NBPF1Q3BBV0 1214 aa11.26□□□□□ -0.61
RPE-205ENST00000429907 SIRT1Q96EB6 747 aa11.26□□□□□ -0.61
RPE-205ENST00000429907 NGLY1Q96IV0 654 aa11.26□□□□□ -0.61
RPE-205ENST00000429907 ALS2Q96Q42 1657 aa11.26□□□□□ -0.61
RPE-205ENST00000429907 SOS2Q07890 1332 aaPredicted RBP11.25□□□□□ -0.61
RPE-205ENST00000429907 TONSLQ96HA7 1378 aa11.25□□□□□ -0.61
RPE-205ENST00000429907 CDK12Q9NYV4 1490 aaPredicted RBP11.25□□□□□ -0.61
RPE-205ENST00000429907 CRYBG1Q9Y4K1 1723 aa11.24□□□□□ -0.61
RPE-205ENST00000429907 PMFBP1Q8TBY8 1022 aa11.24□□□□□ -0.61
RPE-205ENST00000429907 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
RPE-205ENST00000429907 ANKARQ7Z5J8 1434 aa11.24□□□□□ -0.61
RPE-205ENST00000429907 AKAP12Q02952 1782 aa11.23□□□□□ -0.61
RPE-205ENST00000429907 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
RPE-205ENST00000429907 EIF3AQ14152 1382 aaKnown RBP11.23□□□□□ -0.61
RPE-205ENST00000429907 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.23□□□□□ -0.61
RPE-205ENST00000429907 ROCK2O75116 1388 aaKnown RBP11.22□□□□□ -0.61
RPE-205ENST00000429907 ATP7BP35670 1465 aa11.22□□□□□ -0.61
RPE-205ENST00000429907 LMOD2Q6P5Q4 547 aa11.22□□□□□ -0.61
RPE-205ENST00000429907 KRT28Q7Z3Y7 464 aa11.22□□□□□ -0.61
RPE-205ENST00000429907 PHRF1Q9P1Y6 1649 aaKnown RBP11.22□□□□□ -0.61
RPE-205ENST00000429907 USP21Q9UK80 565 aa11.22□□□□□ -0.61
RPE-205ENST00000429907 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
RPE-205ENST00000429907 WASLO00401 505 aaPredicted RBP11.21□□□□□ -0.61
RPE-205ENST00000429907 PSME1Q06323 249 aa11.21□□□□□ -0.61
RPE-205ENST00000429907 PCGF6Q9BYE7 350 aa11.21□□□□□ -0.61
RPE-205ENST00000429907 BRWD3Q6RI45 1802 aa11.21□□□□□ -0.62
RPE-205ENST00000429907 NWD2Q9ULI1 1742 aa11.21□□□□□ -0.62
RPE-205ENST00000429907 TNS3Q68CZ2 1445 aa11.2□□□□□ -0.62
RPE-205ENST00000429907 PRR36Q9H6K5 1346 aa11.2□□□□□ -0.62
RPE-205ENST00000429907 CENPJQ9HC77 1338 aaPredicted RBP11.2□□□□□ -0.62
RPE-205ENST00000429907 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
RPE-205ENST00000429907 SPOCK2Q92563 424 aa11.2□□□□□ -0.62
RPE-205ENST00000429907 CDK19Q9BWU1 502 aa11.19□□□□□ -0.62
RPE-205ENST00000429907 RGPD5Q99666 1765 aa11.18□□□□□ -0.62
RPE-205ENST00000429907 GPRASP1Q5JY77 1395 aa11.18□□□□□ -0.62
RPE-205ENST00000429907 SPATA31A3Q5VYP0 1347 aa11.18□□□□□ -0.62
RPE-205ENST00000429907 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
RPE-205ENST00000429907 NGDNQ8NEJ9 315 aaKnown RBP11.18□□□□□ -0.62
RPE-205ENST00000429907 ATRNO75882 1429 aa11.18□□□□□ -0.62
RPE-205ENST00000429907 ATAD2Q6PL18 1390 aa11.17□□□□□ -0.62
RPE-205ENST00000429907 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
RPE-205ENST00000429907 NUBP1P53384 320 aa11.17□□□□□ -0.62
RPE-205ENST00000429907 NBPF8Q3BBV2 869 aa11.17□□□□□ -0.62
RPE-205ENST00000429907 NUDT16Q96DE0 195 aaKnown RBP11.17□□□□□ -0.62
RPE-205ENST00000429907 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
RPE-205ENST00000429907 MON2Q7Z3U7 1717 aa11.17□□□□□ -0.62
RPE-205ENST00000429907 NRAPQ86VF7 1730 aa11.17□□□□□ -0.62
RPE-205ENST00000429907 RALGAPBQ86X10 1494 aa11.17□□□□□ -0.62
RPE-205ENST00000429907 COL14A1Q05707 1796 aaKnown RBP11.16□□□□□ -0.62
RPE-205ENST00000429907 CABLES1Q8TDN4 633 aa11.16□□□□□ -0.62
RPE-205ENST00000429907 TRPC5Q9UL62 973 aaPredicted RBP11.16□□□□□ -0.62
RPE-205ENST00000429907 PPIP5K1Q6PFW1 1433 aa11.16□□□□□ -0.62
RPE-205ENST00000429907 BCL9LQ86UU0 1499 aa11.15□□□□□ -0.62
RPE-205ENST00000429907 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
RPE-205ENST00000429907 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
RPE-205ENST00000429907 GLI3P10071 1580 aa11.15□□□□□ -0.62
RPE-205ENST00000429907 SBNO1A3KN83 1393 aa11.15□□□□□ -0.63
RPE-205ENST00000429907 ARHGEF10O15013 1369 aa11.15□□□□□ -0.63
RPE-205ENST00000429907 CARD11Q9BXL7 1154 aa11.14□□□□□ -0.63
RPE-205ENST00000429907 PIK3C2AO00443 1686 aa11.14□□□□□ -0.63
RPE-205ENST00000429907 LTN1O94822 1766 aa11.13□□□□□ -0.63
RPE-205ENST00000429907 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
RPE-205ENST00000429907 FNBP4Q8N3X1 1017 aaPredicted RBP11.13□□□□□ -0.63
RPE-205ENST00000429907 EVC2Q86UK5 1308 aa11.12□□□□□ -0.63
RPE-205ENST00000429907 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
RPE-205ENST00000429907 ACEP12821 1306 aa11.11□□□□□ -0.63
RPE-205ENST00000429907 NUTM2GQ5VZR2 741 aa11.11□□□□□ -0.63
RPE-205ENST00000429907 DEFB132Q7Z7B7 95 aa11.11□□□□□ -0.63
RPE-205ENST00000429907 CCDC61Q9Y6R9 512 aa11.11□□□□□ -0.63
RPE-205ENST00000429907 GJD4Q96KN9 370 aaPredicted RBP11.1□□□□□ -0.63
RPE-205ENST00000429907 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
RPE-205ENST00000429907 POLR3AO14802 1390 aaPredicted RBP11.09□□□□□ -0.63
RPE-205ENST00000429907 CCER1Q8TC90 406 aaPredicted RBP11.09□□□□□ -0.63
RPE-205ENST00000429907 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
RPE-205ENST00000429907 CCDC9Q9Y3X0 531 aaKnown RBP11.09□□□□□ -0.63
RPE-205ENST00000429907 KAT6BQ8WYB5 2073 aa11.08□□□□□ -0.63
RPE-205ENST00000429907 EP400Q96L91 3159 aa11.08□□□□□ -0.64
RPE-205ENST00000429907 WNK3Q9BYP7 1800 aa11.08□□□□□ -0.64
RPE-205ENST00000429907 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
RPE-205ENST00000429907 SLIT2O94813 1529 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms