RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 ANKARQ7Z5J8 1434 aa29.49■■■□□ 2.31
VSX1-205ENST00000429762 STRCP1A6NGW2 1772 aa29.49■■■□□ 2.31
VSX1-205ENST00000429762 USP6P35125 1406 aa29.49■■■□□ 2.31
VSX1-205ENST00000429762 PROSER2Q86WR7 435 aaPredicted RBP29.48■■■□□ 2.31
VSX1-205ENST00000429762 CCDC146Q8IYE0 955 aa29.48■■■□□ 2.31
VSX1-205ENST00000429762 NGDNQ8NEJ9 315 aaKnown RBP29.47■■■□□ 2.31
VSX1-205ENST00000429762 TTC21BQ7Z4L5 1316 aa29.47■■■□□ 2.31
VSX1-205ENST00000429762 STRCQ7RTU9 1775 aa29.46■■■□□ 2.31
VSX1-205ENST00000429762 INSRP06213 1382 aa29.46■■■□□ 2.31
VSX1-205ENST00000429762 CFAP53Q96M91 514 aa29.44■■■□□ 2.3
VSX1-205ENST00000429762 COG3Q96JB2 828 aa29.42■■■□□ 2.3
VSX1-205ENST00000429762 SSH2Q76I76 1423 aa29.4■■■□□ 2.3
VSX1-205ENST00000429762 MAP2P11137 1827 aaKnown RBP29.39■■■□□ 2.3
VSX1-205ENST00000429762 COL3A1P02461 1466 aaPredicted RBP29.39■■■□□ 2.3
VSX1-205ENST00000429762 PPM1GO15355 546 aaPredicted RBP29.39■■■□□ 2.29
VSX1-205ENST00000429762 POLKQ9UBT6 870 aa29.37■■■□□ 2.29
VSX1-205ENST00000429762 PHF8Q9UPP1 1060 aa29.37■■■□□ 2.29
VSX1-205ENST00000429762 EMILIN1Q9Y6C2 1016 aa29.35■■■□□ 2.29
VSX1-205ENST00000429762 TMEM94Q12767 1356 aa29.35■■■□□ 2.29
VSX1-205ENST00000429762 ESCO1Q5FWF5 840 aa29.35■■■□□ 2.29
VSX1-205ENST00000429762 OVOS2A0A0J9YW53 1432 aa29.34■■■□□ 2.29
VSX1-205ENST00000429762 OVOS2Q6IE36 1432 aa29.34■■■□□ 2.29
VSX1-205ENST00000429762 RRS1Q15050 365 aaKnown RBP29.33■■■□□ 2.29
VSX1-205ENST00000429762 PIK3C2AO00443 1686 aa29.32■■■□□ 2.28
VSX1-205ENST00000429762 APAF1O14727 1248 aa29.32■■■□□ 2.28
VSX1-205ENST00000429762 SMG6Q86US8 1419 aaKnown RBP29.31■■■□□ 2.28
VSX1-205ENST00000429762 SOX12O15370 315 aa29.31■■■□□ 2.28
VSX1-205ENST00000429762 U2SURPO15042 1029 aaKnown RBP29.3■■■□□ 2.28
VSX1-205ENST00000429762 U2AF1L5P0DN76 240 aaPredicted RBP29.3■■■□□ 2.28
VSX1-205ENST00000429762 U2AF1Q01081 240 aaKnown RBP eCLIP29.3■■■□□ 2.28
VSX1-205ENST00000429762 TTC21AQ8NDW8 1320 aa29.3■■■□□ 2.28
VSX1-205ENST00000429762 ORAI2Q96SN7 254 aa29.3■■■□□ 2.28
VSX1-205ENST00000429762 SUPT16HQ9Y5B9 1047 aaKnown RBP29.3■■■□□ 2.28
VSX1-205ENST00000429762 NUDCQ9Y266 331 aa29.3■■■□□ 2.28
VSX1-205ENST00000429762 CDCA7LQ96GN5 454 aa29.29■■■□□ 2.28
VSX1-205ENST00000429762 PNPLA6Q8IY17 1366 aa29.28■■■□□ 2.28
VSX1-205ENST00000429762 NUTM2GQ5VZR2 741 aa29.28■■■□□ 2.28
VSX1-205ENST00000429762 AATKQ6ZMQ8 1374 aa29.28■■■□□ 2.28
VSX1-205ENST00000429762 PAK3O75914 559 aaPredicted RBP29.28■■■□□ 2.28
VSX1-205ENST00000429762 C19orf44Q9H6X5 657 aa29.28■■■□□ 2.28
VSX1-205ENST00000429762 DIAPH1O60610 1272 aaKnown RBP29.26■■■□□ 2.28
VSX1-205ENST00000429762 ZNF335Q9H4Z2 1342 aaPredicted RBP29.25■■■□□ 2.27
VSX1-205ENST00000429762 XIRP1Q702N8 1843 aaKnown RBP29.23■■■□□ 2.27
VSX1-205ENST00000429762 C1orf167Q5SNV9 1468 aa29.23■■■□□ 2.27
VSX1-205ENST00000429762 CDK12Q9NYV4 1490 aaPredicted RBP29.23■■■□□ 2.27
VSX1-205ENST00000429762 MARF1Q9Y4F3 1742 aaKnown RBP29.23■■■□□ 2.27
VSX1-205ENST00000429762 XPCQ01831 940 aaPredicted RBP29.22■■■□□ 2.27
VSX1-205ENST00000429762 RUNDC1Q96C34 613 aa29.22■■■□□ 2.27
VSX1-205ENST00000429762 USP31Q70CQ4 1352 aa29.22■■■□□ 2.27
VSX1-205ENST00000429762 RRP7AQ9Y3A4 280 aaKnown RBP29.22■■■□□ 2.27
VSX1-205ENST00000429762 NLRP6P59044 892 aa29.21■■■□□ 2.27
VSX1-205ENST00000429762 ATF3P18847 181 aa29.21■■■□□ 2.27
VSX1-205ENST00000429762 PSME1Q06323 249 aa29.21■■■□□ 2.27
VSX1-205ENST00000429762 IQSEC2Q5JU85 1478 aa29.2■■■□□ 2.27
VSX1-205ENST00000429762 FOXO3O43524 673 aa29.2■■■□□ 2.26
VSX1-205ENST00000429762 ABTB2Q8N961 1025 aa29.2■■■□□ 2.26
VSX1-205ENST00000429762 PEAK1Q9H792 1746 aa29.2■■■□□ 2.26
VSX1-205ENST00000429762 FKBP8Q14318 412 aa29.19■■■□□ 2.26
VSX1-205ENST00000429762 MST1RQ04912 1400 aa29.19■■■□□ 2.26
VSX1-205ENST00000429762 PDE3BQ13370 1112 aa29.19■■■□□ 2.26
VSX1-205ENST00000429762 NEUROD2Q15784 382 aa29.19■■■□□ 2.26
VSX1-205ENST00000429762 ZNF521Q96K83 1311 aa29.18■■■□□ 2.26
VSX1-205ENST00000429762 TCP11L2Q8N4U5 519 aa29.17■■■□□ 2.26
VSX1-205ENST00000429762 IRX6P78412 446 aaPredicted RBP29.16■■■□□ 2.26
VSX1-205ENST00000429762 LRRC7Q96NW7 1537 aa29.16■■■□□ 2.26
VSX1-205ENST00000429762 NCOA3Q9Y6Q9 1424 aa29.15■■■□□ 2.26
VSX1-205ENST00000429762 IL13P35225 146 aa29.15■■■□□ 2.26
VSX1-205ENST00000429762 NEFLP07196 543 aa29.14■■■□□ 2.26
VSX1-205ENST00000429762 MSH6P52701 1360 aa29.13■■■□□ 2.25
VSX1-205ENST00000429762 KIF1AQ12756 1690 aa29.13■■■□□ 2.25
VSX1-205ENST00000429762 USP54Q70EL1 1684 aa29.13■■■□□ 2.25
VSX1-205ENST00000429762 DCCP43146 1447 aa29.13■■■□□ 2.25
VSX1-205ENST00000429762 MAP3K19Q56UN5 1328 aa29.13■■■□□ 2.25
VSX1-205ENST00000429762 PLEKHF1Q96S99 279 aa29.13■■■□□ 2.25
VSX1-205ENST00000429762 DMRT2Q9Y5R5 561 aa29.12■■■□□ 2.25
VSX1-205ENST00000429762 PLEKHG5O94827 1062 aa29.12■■■□□ 2.25
VSX1-205ENST00000429762 HMOX1P09601 288 aa29.12■■■□□ 2.25
VSX1-205ENST00000429762 DDX17Q92841 729 aaKnown RBP29.11■■■□□ 2.25
VSX1-205ENST00000429762 HSP90AB2PQ58FF8 381 aa29.1■■■□□ 2.25
VSX1-205ENST00000429762 GOLGA2Q08379 1002 aa29.1■■■□□ 2.25
VSX1-205ENST00000429762 CADPS2Q86UW7 1296 aa29.09■■■□□ 2.25
VSX1-205ENST00000429762 SPINK5Q9NQ38 1064 aaPredicted RBP29.09■■■□□ 2.25
VSX1-205ENST00000429762 TRPM3Q9HCF6 1732 aaPredicted RBP29.08■■■□□ 2.25
VSX1-205ENST00000429762 EIF4A2Q14240 407 aaKnown RBP29.08■■■□□ 2.25
VSX1-205ENST00000429762 KRT28Q7Z3Y7 464 aa29.08■■■□□ 2.25
VSX1-205ENST00000429762 WWC1Q8IX03 1113 aa29.07■■■□□ 2.24
VSX1-205ENST00000429762 RSPH6AQ9H0K4 717 aa29.07■■■□□ 2.24
VSX1-205ENST00000429762 PRKAR2BP31323 418 aa29.06■■■□□ 2.24
VSX1-205ENST00000429762 LMOD2Q6P5Q4 547 aa29.06■■■□□ 2.24
VSX1-205ENST00000429762 MAPK8IP3Q9UPT6 1336 aa29.06■■■□□ 2.24
VSX1-205ENST00000429762 AMPHP49418 695 aa29.04■■■□□ 2.24
VSX1-205ENST00000429762 SBNO1A3KN83 1393 aa29.03■■■□□ 2.24
VSX1-205ENST00000429762 FCHSD2O94868 740 aa29.03■■■□□ 2.24
VSX1-205ENST00000429762 SLFN5Q08AF3 891 aa29.03■■■□□ 2.24
VSX1-205ENST00000429762 DUSP27Q5VZP5 1158 aa29.03■■■□□ 2.24
VSX1-205ENST00000429762 FLT4P35916 1363 aa29.02■■■□□ 2.24
VSX1-205ENST00000429762 TMPOP42166 694 aaKnown RBP29.01■■■□□ 2.23
VSX1-205ENST00000429762 NGEFQ8N5V2 710 aa29.01■■■□□ 2.23
VSX1-205ENST00000429762 LTN1O94822 1766 aa29■■■□□ 2.23
VSX1-205ENST00000429762 RCAN3Q9UKA8 241 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms