RNA–Protein interactions for RNA: ENST00000428863.6

MDM2-215, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-215ENST00000428863 VPS72Q15906 364 aa21.83■■□□□ 1.09
MDM2-215ENST00000428863 CCDC61Q9Y6R9 512 aa21.83■■□□□ 1.09
MDM2-215ENST00000428863 ACEP12821 1306 aa21.82■■□□□ 1.08
MDM2-215ENST00000428863 TRPM1Q7Z4N2 1603 aa21.82■■□□□ 1.08
MDM2-215ENST00000428863 PLEKHG3A1L390 1219 aa21.82■■□□□ 1.08
MDM2-215ENST00000428863 NRAPQ86VF7 1730 aa21.82■■□□□ 1.08
MDM2-215ENST00000428863 POLR3AO14802 1390 aaPredicted RBP21.82■■□□□ 1.08
MDM2-215ENST00000428863 CENPJQ9HC77 1338 aaPredicted RBP21.81■■□□□ 1.08
MDM2-215ENST00000428863 NBPF8Q3BBV2 869 aa21.81■■□□□ 1.08
MDM2-215ENST00000428863 QRICH2Q9H0J4 1663 aa21.81■■□□□ 1.08
MDM2-215ENST00000428863 CABP2Q9NPB3 220 aa21.79■■□□□ 1.08
MDM2-215ENST00000428863 COL14A1Q05707 1796 aaKnown RBP21.79■■□□□ 1.08
MDM2-215ENST00000428863 EP400Q96L91 3159 aa21.78■■□□□ 1.08
MDM2-215ENST00000428863 ONECUT3O60422 494 aaPredicted RBP21.78■■□□□ 1.08
MDM2-215ENST00000428863 NUTM2GQ5VZR2 741 aa21.78■■□□□ 1.08
MDM2-215ENST00000428863 BTG4Q9NY30 223 aa21.78■■□□□ 1.08
MDM2-215ENST00000428863 SEPT12Q8IYM1 358 aa21.77■■□□□ 1.08
MDM2-215ENST00000428863 SRPK2P78362 688 aaKnown RBP21.76■■□□□ 1.07
MDM2-215ENST00000428863 CCDC9Q9Y3X0 531 aaKnown RBP21.76■■□□□ 1.07
MDM2-215ENST00000428863 PHRF1Q9P1Y6 1649 aaKnown RBP21.75■■□□□ 1.07
MDM2-215ENST00000428863 PPIP5K1Q6PFW1 1433 aa21.74■■□□□ 1.07
MDM2-215ENST00000428863 PRDM11Q9NQV5 511 aa21.72■■□□□ 1.07
MDM2-215ENST00000428863 KIAA0232Q92628 1395 aa21.72■■□□□ 1.07
MDM2-215ENST00000428863 CHRNA2Q15822 529 aa21.71■■□□□ 1.07
MDM2-215ENST00000428863 CABP1Q9NZU7 370 aa21.71■■□□□ 1.07
MDM2-215ENST00000428863 ROCK2O75116 1388 aaKnown RBP21.71■■□□□ 1.07
MDM2-215ENST00000428863 ZC3H6P61129 1189 aaKnown RBP21.7■■□□□ 1.06
MDM2-215ENST00000428863 ABTB2Q8N961 1025 aa21.7■■□□□ 1.06
MDM2-215ENST00000428863 FAM98CQ17RN3 349 aaKnown RBP21.69■■□□□ 1.06
MDM2-215ENST00000428863 SPATA31A5Q5VU36 1347 aa21.69■■□□□ 1.06
MDM2-215ENST00000428863 SPATA31A7Q8IWB4 1347 aa21.69■■□□□ 1.06
MDM2-215ENST00000428863 CCDC125Q86Z20 511 aa21.68■■□□□ 1.06
MDM2-215ENST00000428863 NRKQ7Z2Y5 1582 aa21.66■■□□□ 1.06
MDM2-215ENST00000428863 USP19O94966 1318 aa21.66■■□□□ 1.06
MDM2-215ENST00000428863 EVC2Q86UK5 1308 aa21.66■■□□□ 1.06
MDM2-215ENST00000428863 KRT27Q7Z3Y8 459 aa21.66■■□□□ 1.06
MDM2-215ENST00000428863 USP6P35125 1406 aa21.64■■□□□ 1.06
MDM2-215ENST00000428863 BLMP54132 1417 aaPredicted RBP21.63■■□□□ 1.05
MDM2-215ENST00000428863 SSH2Q76I76 1423 aa21.63■■□□□ 1.05
MDM2-215ENST00000428863 THSD7AQ9UPZ6 1657 aa21.63■■□□□ 1.05
MDM2-215ENST00000428863 CAMTA1Q9Y6Y1 1673 aa21.63■■□□□ 1.05
MDM2-215ENST00000428863 SPATA31A1Q5TZJ5 1347 aa21.62■■□□□ 1.05
MDM2-215ENST00000428863 A0A0G2JS52 829 aa21.62■■□□□ 1.05
MDM2-215ENST00000428863 GCP02774 474 aa21.62■■□□□ 1.05
MDM2-215ENST00000428863 MYT1Q01538 1121 aa21.62■■□□□ 1.05
MDM2-215ENST00000428863 TRIM26Q12899 539 aaPredicted RBP21.62■■□□□ 1.05
MDM2-215ENST00000428863 DEFB132Q7Z7B7 95 aa21.62■■□□□ 1.05
MDM2-215ENST00000428863 NLRP13Q86W25 1043 aa21.62■■□□□ 1.05
MDM2-215ENST00000428863 STRN4Q9NRL3 753 aa21.62■■□□□ 1.05
MDM2-215ENST00000428863 BRD4O60885 1362 aaPredicted RBP21.61■■□□□ 1.05
MDM2-215ENST00000428863 LMO7Q8WWI1 1683 aa21.61■■□□□ 1.05
MDM2-215ENST00000428863 CPDO75976 1380 aa21.61■■□□□ 1.05
MDM2-215ENST00000428863 FAM182BQ5T319 152 aa21.6■■□□□ 1.05
MDM2-215ENST00000428863 AKAP12Q02952 1782 aa21.6■■□□□ 1.05
MDM2-215ENST00000428863 PIK3C2AO00443 1686 aa21.59■■□□□ 1.05
MDM2-215ENST00000428863 NLRP6P59044 892 aa21.58■■□□□ 1.05
MDM2-215ENST00000428863 CARD11Q9BXL7 1154 aa21.58■■□□□ 1.05
MDM2-215ENST00000428863 LARP1Q6PKG0 1096 aaKnown RBP21.57■■□□□ 1.04
MDM2-215ENST00000428863 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
MDM2-215ENST00000428863 SLIT3O75094 1523 aa21.56■■□□□ 1.04
MDM2-215ENST00000428863 EVA1CP58658 441 aa21.56■■□□□ 1.04
MDM2-215ENST00000428863 USP35Q9P2H5 1018 aa21.56■■□□□ 1.04
MDM2-215ENST00000428863 TTC21BQ7Z4L5 1316 aa21.55■■□□□ 1.04
MDM2-215ENST00000428863 CPSF1Q10570 1443 aaKnown RBP21.55■■□□□ 1.04
MDM2-215ENST00000428863 SBNO2Q9Y2G9 1366 aa21.54■■□□□ 1.04
MDM2-215ENST00000428863 ZNF692Q9BU19 519 aaPredicted RBP21.54■■□□□ 1.04
MDM2-215ENST00000428863 ZRANB1Q9UGI0 708 aa21.54■■□□□ 1.04
MDM2-215ENST00000428863 COL18A1P39060 1754 aa21.53■■□□□ 1.04
MDM2-215ENST00000428863 SF3B2Q13435 895 aaKnown RBP21.52■■□□□ 1.04
MDM2-215ENST00000428863 COL5A2P05997 1499 aaPredicted RBP21.52■■□□□ 1.03
MDM2-215ENST00000428863 ZBTB7CA1YPR0 619 aa21.51■■□□□ 1.03
MDM2-215ENST00000428863 BARGINQ6ZT62 677 aa21.51■■□□□ 1.03
MDM2-215ENST00000428863 MON2Q7Z3U7 1717 aa21.5■■□□□ 1.03
MDM2-215ENST00000428863 CD163L1Q9NR16 1453 aa21.5■■□□□ 1.03
MDM2-215ENST00000428863 RGPD5Q99666 1765 aa21.49■■□□□ 1.03
MDM2-215ENST00000428863 TCP11L2Q8N4U5 519 aa21.49■■□□□ 1.03
MDM2-215ENST00000428863 AXIN2Q9Y2T1 843 aa21.49■■□□□ 1.03
MDM2-215ENST00000428863 AATKQ6ZMQ8 1374 aa21.48■■□□□ 1.03
MDM2-215ENST00000428863 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
MDM2-215ENST00000428863 RGPD1P0DJD0 1748 aa21.48■■□□□ 1.03
MDM2-215ENST00000428863 TTC21AQ8NDW8 1320 aa21.48■■□□□ 1.03
MDM2-215ENST00000428863 TNS1Q9HBL0 1735 aaKnown RBP21.47■■□□□ 1.03
MDM2-215ENST00000428863 SLC12A5Q9H2X9 1139 aa21.47■■□□□ 1.03
MDM2-215ENST00000428863 ARHGEF25Q86VW2 580 aa21.46■■□□□ 1.03
MDM2-215ENST00000428863 BAG6P46379 1132 aa21.45■■□□□ 1.02
MDM2-215ENST00000428863 EN1Q05925 392 aaPredicted RBP21.45■■□□□ 1.02
MDM2-215ENST00000428863 TESK2Q96S53 571 aa21.45■■□□□ 1.02
MDM2-215ENST00000428863 SOX12O15370 315 aa21.44■■□□□ 1.02
MDM2-215ENST00000428863 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.44■■□□□ 1.02
MDM2-215ENST00000428863 THRAP3Q9Y2W1 955 aaKnown RBP21.44■■□□□ 1.02
MDM2-215ENST00000428863 CRB1P82279 1406 aa21.44■■□□□ 1.02
MDM2-215ENST00000428863 NFAT5O94916 1531 aa21.44■■□□□ 1.02
MDM2-215ENST00000428863 SRCAPQ6ZRS2 3230 aa21.44■■□□□ 1.02
MDM2-215ENST00000428863 ST20-MTHFSA0A0A6YYL1 179 aa21.43■■□□□ 1.02
MDM2-215ENST00000428863 TRIM37O94972 964 aa21.43■■□□□ 1.02
MDM2-215ENST00000428863 FAM196AQ6ZSG2 479 aa21.43■■□□□ 1.02
MDM2-215ENST00000428863 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
MDM2-215ENST00000428863 PARP4Q9UKK3 1724 aaKnown RBP21.43■■□□□ 1.02
MDM2-215ENST00000428863 PDE3BQ13370 1112 aa21.42■■□□□ 1.02
MDM2-215ENST00000428863 KCNH5Q8NCM2 988 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms