RNA–Protein interactions for RNA: ENST00000428863.6

MDM2-215, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-215ENST00000428863 NISCHQ9Y2I1 1504 aa37.71■■■■□ 3.63
MDM2-215ENST00000428863 CCDC180Q9P1Z9 1646 aa33.7■■■□□ 2.99
MDM2-215ENST00000428863 ABCC9O60706 1549 aa33.53■■■□□ 2.96
MDM2-215ENST00000428863 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
MDM2-215ENST00000428863 NACADO15069 1562 aa31.81■■■□□ 2.68
MDM2-215ENST00000428863 DCAF8L2P0C7V8 631 aa31.74■■■□□ 2.67
MDM2-215ENST00000428863 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
MDM2-215ENST00000428863 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
MDM2-215ENST00000428863 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
MDM2-215ENST00000428863 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
MDM2-215ENST00000428863 ZCCHC6Q5VYS8 1495 aaKnown RBP31.28■■■□□ 2.6
MDM2-215ENST00000428863 DCAF1Q9Y4B6 1507 aa31.13■■■□□ 2.57
MDM2-215ENST00000428863 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
MDM2-215ENST00000428863 SCRIBQ14160 1630 aa30.76■■■□□ 2.51
MDM2-215ENST00000428863 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
MDM2-215ENST00000428863 CC2D2AQ9P2K1 1620 aa30.3■■■□□ 2.44
MDM2-215ENST00000428863 EIF4G1Q04637 1599 aaKnown RBP30.28■■■□□ 2.44
MDM2-215ENST00000428863 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
MDM2-215ENST00000428863 NCAPD3P42695 1498 aa29.39■■■□□ 2.3
MDM2-215ENST00000428863 SMARCA4P51532 1647 aa29.37■■■□□ 2.29
MDM2-215ENST00000428863 ATAD2BQ9ULI0 1458 aa29.35■■■□□ 2.29
MDM2-215ENST00000428863 SMARCA2P51531 1590 aa29.22■■■□□ 2.27
MDM2-215ENST00000428863 BAZ1AQ9NRL2 1556 aaPredicted RBP29.21■■■□□ 2.27
MDM2-215ENST00000428863 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
MDM2-215ENST00000428863 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
MDM2-215ENST00000428863 PEG3Q9GZU2 1588 aa29.06■■■□□ 2.24
MDM2-215ENST00000428863 BAZ1BQ9UIG0 1483 aaKnown RBP29.03■■■□□ 2.24
MDM2-215ENST00000428863 NESP48681 1621 aa28.91■■■□□ 2.22
MDM2-215ENST00000428863 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
MDM2-215ENST00000428863 WIZO95785 1651 aa28.77■■■□□ 2.2
MDM2-215ENST00000428863 CUX2O14529 1486 aa28.74■■■□□ 2.19
MDM2-215ENST00000428863 LAMC3Q9Y6N6 1575 aa28.66■■■□□ 2.18
MDM2-215ENST00000428863 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
MDM2-215ENST00000428863 DNAJC5Q9H3Z4 198 aa28.54■■■□□ 2.16
MDM2-215ENST00000428863 KIF21AQ7Z4S6 1674 aa28.53■■■□□ 2.16
MDM2-215ENST00000428863 THOC2Q8NI27 1593 aaKnown RBP28.53■■■□□ 2.16
MDM2-215ENST00000428863 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
MDM2-215ENST00000428863 PDS5BQ9NTI5 1447 aa28.47■■■□□ 2.15
MDM2-215ENST00000428863 TOP2AP11388 1531 aaKnown RBP28.35■■■□□ 2.13
MDM2-215ENST00000428863 CFTRP13569 1480 aa28.23■■■□□ 2.11
MDM2-215ENST00000428863 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
MDM2-215ENST00000428863 FANCD2Q9BXW9 1451 aa28.17■■■□□ 2.1
MDM2-215ENST00000428863 WDR62O43379 1518 aa28.17■■■□□ 2.1
MDM2-215ENST00000428863 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
MDM2-215ENST00000428863 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
MDM2-215ENST00000428863 PRDM2Q13029 1718 aa27.97■■■□□ 2.07
MDM2-215ENST00000428863 URB2Q14146 1524 aaKnown RBP27.96■■■□□ 2.07
MDM2-215ENST00000428863 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
MDM2-215ENST00000428863 ZNF608Q9ULD9 1512 aaPredicted RBP27.59■■■□□ 2.01
MDM2-215ENST00000428863 IFT140Q96RY7 1462 aa27.58■■■□□ 2.01
MDM2-215ENST00000428863 ABCC8Q09428 1581 aa27.57■■■□□ 2
MDM2-215ENST00000428863 DNMBPQ6XZF7 1577 aa27.57■■■□□ 2
MDM2-215ENST00000428863 OSCARQ8IYS5 282 aa27.5■■□□□ 1.99
MDM2-215ENST00000428863 SUPT5HO00267 1087 aaKnown RBP27.47■■□□□ 1.99
MDM2-215ENST00000428863 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
MDM2-215ENST00000428863 POLA1P09884 1462 aaPredicted RBP27.41■■□□□ 1.98
MDM2-215ENST00000428863 EIF4G3O43432 1585 aaKnown RBP27.4■■□□□ 1.98
MDM2-215ENST00000428863 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
MDM2-215ENST00000428863 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.979e-7■■■■□ 20
MDM2-215ENST00000428863 RAD54L2Q9Y4B4 1467 aa27.34■■□□□ 1.97
MDM2-215ENST00000428863 CUX1P39880 1505 aa27.31■■□□□ 1.96
MDM2-215ENST00000428863 SOGA1O94964 1423 aa27.29■■□□□ 1.96
MDM2-215ENST00000428863 FGD5Q6ZNL6 1462 aa27.27■■□□□ 1.96
MDM2-215ENST00000428863 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
MDM2-215ENST00000428863 CHD1O14646 1710 aa27.19■■□□□ 1.94
MDM2-215ENST00000428863 RIMBP3CA6NJZ7 1639 aa27.15■■□□□ 1.94
MDM2-215ENST00000428863 RIMBP3BA6NNM3 1639 aa27.15■■□□□ 1.94
MDM2-215ENST00000428863 RIMBP3Q9UFD9 1639 aa27.15■■□□□ 1.94
MDM2-215ENST00000428863 FBLN2P98095 1184 aa27.1■■□□□ 1.93
MDM2-215ENST00000428863 WDR97A6NE52 1622 aa27.08■■□□□ 1.93
MDM2-215ENST00000428863 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
MDM2-215ENST00000428863 SNAPC4Q5SXM2 1469 aa27.06■■□□□ 1.92
MDM2-215ENST00000428863 GRIN2BQ13224 1484 aa27■■□□□ 1.91
MDM2-215ENST00000428863 ABCA10Q8WWZ4 1543 aa26.96■■□□□ 1.91
MDM2-215ENST00000428863 MAGI1Q96QZ7 1491 aaPredicted RBP26.96■■□□□ 1.91
MDM2-215ENST00000428863 GAPVD1Q14C86 1478 aa26.95■■□□□ 1.91
MDM2-215ENST00000428863 PBRM1Q86U86 1689 aa26.94■■□□□ 1.9
MDM2-215ENST00000428863 CHMP7Q8WUX9 453 aaPredicted RBP26.92■■□□□ 1.9
MDM2-215ENST00000428863 ABCA5Q8WWZ7 1642 aa26.91■■□□□ 1.9
MDM2-215ENST00000428863 BIVM-ERCC5R4GMW8 1640 aa26.91■■□□□ 1.9
MDM2-215ENST00000428863 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
MDM2-215ENST00000428863 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
MDM2-215ENST00000428863 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
MDM2-215ENST00000428863 SYNJ2O15056 1496 aa26.88■■□□□ 1.89
MDM2-215ENST00000428863 CYB5RLQ6IPT4 315 aa26.88■■□□□ 1.89
MDM2-215ENST00000428863 CLASP1Q7Z460 1538 aa26.86■■□□□ 1.89
MDM2-215ENST00000428863 ARAP1Q96P48 1450 aa26.83■■□□□ 1.89
MDM2-215ENST00000428863 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
MDM2-215ENST00000428863 GRIN2AQ12879 1464 aa26.66■■□□□ 1.86
MDM2-215ENST00000428863 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
MDM2-215ENST00000428863 FHAD1B1AJZ9 1412 aa26.6■■□□□ 1.85
MDM2-215ENST00000428863 CEP170Q5SW79 1584 aa26.59■■□□□ 1.85
MDM2-215ENST00000428863 NUP160Q12769 1436 aa26.58■■□□□ 1.85
MDM2-215ENST00000428863 ERCC6L2Q5T890 1561 aa26.53■■□□□ 1.84
MDM2-215ENST00000428863 TRHP20396 242 aaPredicted RBP26.46■■□□□ 1.83
MDM2-215ENST00000428863 SHROOM2Q13796 1616 aa26.44■■□□□ 1.82
MDM2-215ENST00000428863 IGF1RP08069 1367 aa26.39■■□□□ 1.82
MDM2-215ENST00000428863 KIF27Q86VH2 1401 aa26.35■■□□□ 1.81
MDM2-215ENST00000428863 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
MDM2-215ENST00000428863 PRG4Q92954 1404 aaPredicted RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms