RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 LRRFIP1Q32MZ4 808 aaKnown RBP11.86□□□□□ -0.51
SNX13-203ENST00000428135 PLEKHH2Q8IVE3 1493 aa11.86□□□□□ -0.51
SNX13-203ENST00000428135 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
SNX13-203ENST00000428135 MAP4K4O95819 1239 aaPredicted RBP11.86□□□□□ -0.51
SNX13-203ENST00000428135 EHBP1L1Q8N3D4 1523 aa11.86□□□□□ -0.51
SNX13-203ENST00000428135 DCAF8L1A6NGE4 600 aa11.86□□□□□ -0.51
SNX13-203ENST00000428135 SURF6O75683 361 aaKnown RBP11.86□□□□□ -0.51
SNX13-203ENST00000428135 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
SNX13-203ENST00000428135 CEP89Q96ST8 783 aa11.86□□□□□ -0.51
SNX13-203ENST00000428135 RRP12Q5JTH9 1297 aaKnown RBP11.85□□□□□ -0.51
SNX13-203ENST00000428135 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
SNX13-203ENST00000428135 CPLX2Q6PUV4 134 aaKnown RBP11.85□□□□□ -0.51
SNX13-203ENST00000428135 BCL11BQ9C0K0 894 aaPredicted RBP11.85□□□□□ -0.51
SNX13-203ENST00000428135 MIS18AQ9NYP9 233 aa11.85□□□□□ -0.51
SNX13-203ENST00000428135 DAPK1P53355 1430 aa11.85□□□□□ -0.51
SNX13-203ENST00000428135 ATP2B2Q01814 1243 aa11.85□□□□□ -0.51
SNX13-203ENST00000428135 PPP2R1AP30153 589 aa11.84□□□□□ -0.51
SNX13-203ENST00000428135 CNNM1Q9NRU3 951 aa11.84□□□□□ -0.51
SNX13-203ENST00000428135 NCKAP5LQ9HCH0 1330 aa11.84□□□□□ -0.51
SNX13-203ENST00000428135 CCAR2Q8N163 923 aaKnown RBP11.84□□□□□ -0.51
SNX13-203ENST00000428135 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
SNX13-203ENST00000428135 PTMSP20962 102 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 FSD1Q9BTV5 496 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 RRBP1Q9P2E9 1410 aaKnown RBP11.83□□□□□ -0.52
SNX13-203ENST00000428135 NBPF8Q3BBV2 869 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 USHBP1Q8N6Y0 703 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 AKNAQ7Z591 1439 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 ATP2B1P20020 1258 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 REC8O95072 547 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 CCDC30Q5VVM6 783 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 BICD2Q8TD16 824 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 BECN2A8MW95 431 aa11.83□□□□□ -0.52
SNX13-203ENST00000428135 PCF11O94913 1555 aaKnown RBP11.83□□□□□ -0.52
SNX13-203ENST00000428135 GAS2L2Q8NHY3 880 aa11.82□□□□□ -0.52
SNX13-203ENST00000428135 CCDC43Q96MW1 224 aaKnown RBP11.82□□□□□ -0.52
SNX13-203ENST00000428135 TWISTNBQ3B726 338 aaPredicted RBP11.82□□□□□ -0.52
SNX13-203ENST00000428135 RALYLQ86SE5 291 aaKnown RBP11.82□□□□□ -0.52
SNX13-203ENST00000428135 HDGFL1Q5TGJ6 251 aa11.82□□□□□ -0.52
SNX13-203ENST00000428135 CNTLNQ9NXG0 1405 aa11.82□□□□□ -0.52
SNX13-203ENST00000428135 GOLGA6L19H0YKK7 550 aa11.82□□□□□ -0.52
SNX13-203ENST00000428135 TPM3P06753 285 aa11.81□□□□□ -0.52
SNX13-203ENST00000428135 NUDT16Q96DE0 195 aaKnown RBP11.81□□□□□ -0.52
SNX13-203ENST00000428135 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
SNX13-203ENST00000428135 SMG6Q86US8 1419 aaKnown RBP11.81□□□□□ -0.52
SNX13-203ENST00000428135 RBM5P52756 815 aaKnown RBP eCLIP11.81□□□□□ -0.52
SNX13-203ENST00000428135 CUL7Q14999 1698 aa11.81□□□□□ -0.52
SNX13-203ENST00000428135 ERC2O15083 957 aa11.81□□□□□ -0.52
SNX13-203ENST00000428135 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
SNX13-203ENST00000428135 ROCK1Q13464 1354 aa11.81□□□□□ -0.52
SNX13-203ENST00000428135 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
SNX13-203ENST00000428135 BCAR3O75815 825 aa11.81□□□□□ -0.52
SNX13-203ENST00000428135 KIF14Q15058 1648 aa11.8□□□□□ -0.52
SNX13-203ENST00000428135 CAMSAP2Q08AD1 1489 aa11.8□□□□□ -0.52
SNX13-203ENST00000428135 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
SNX13-203ENST00000428135 CHRNA2Q15822 529 aa11.79□□□□□ -0.52
SNX13-203ENST00000428135 SMC3Q9UQE7 1217 aa11.79□□□□□ -0.52
SNX13-203ENST00000428135 CCDC141Q6ZP82 1450 aa11.79□□□□□ -0.52
SNX13-203ENST00000428135 SUPT6HQ7KZ85 1726 aaKnown RBP11.79□□□□□ -0.52
SNX13-203ENST00000428135 PHF14O94880 888 aa11.79□□□□□ -0.52
SNX13-203ENST00000428135 INTS3Q68E01 1043 aaKnown RBP11.79□□□□□ -0.52
SNX13-203ENST00000428135 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
SNX13-203ENST00000428135 THUMPD2Q9BTF0 503 aaKnown RBP11.79□□□□□ -0.52
SNX13-203ENST00000428135 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
SNX13-203ENST00000428135 ZNF592Q92610 1267 aa11.78□□□□□ -0.52
SNX13-203ENST00000428135 C8orf37Q96NL8 207 aa11.78□□□□□ -0.52
SNX13-203ENST00000428135 CLASRPQ8N2M8 674 aaKnown RBP11.78□□□□□ -0.52
SNX13-203ENST00000428135 DCTN1Q14203 1278 aa11.78□□□□□ -0.52
SNX13-203ENST00000428135 HSP90AB4PQ58FF6 505 aa11.78□□□□□ -0.52
SNX13-203ENST00000428135 BTBD11A6QL63 1104 aa11.77□□□□□ -0.52
SNX13-203ENST00000428135 WWC3Q9ULE0 1092 aa11.77□□□□□ -0.52
SNX13-203ENST00000428135 ADGRF5Q8IZF2 1346 aa11.77□□□□□ -0.52
SNX13-203ENST00000428135 TIAM1Q13009 1591 aa11.77□□□□□ -0.52
SNX13-203ENST00000428135 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.52
SNX13-203ENST00000428135 CCAR1Q8IX12 1150 aaKnown RBP11.77□□□□□ -0.53
SNX13-203ENST00000428135 SPG7Q9UQ90 795 aa11.77□□□□□ -0.53
SNX13-203ENST00000428135 TBC1D2BQ9UPU7 963 aa11.77□□□□□ -0.53
SNX13-203ENST00000428135 ATP6V1DQ9Y5K8 247 aa11.76□□□□□ -0.53
SNX13-203ENST00000428135 TPM2P07951 284 aa11.76□□□□□ -0.53
SNX13-203ENST00000428135 CEBPZQ03701 1054 aaKnown RBP11.76□□□□□ -0.53
SNX13-203ENST00000428135 CNTROBQ8N137 903 aa11.76□□□□□ -0.53
SNX13-203ENST00000428135 KIAA1107Q9UPP5 1409 aa11.76□□□□□ -0.53
SNX13-203ENST00000428135 DDX11L8A8MPP1 907 aa11.75□□□□□ -0.53
SNX13-203ENST00000428135 FKBP4Q02790 459 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNX13-203ENST00000428135 STK3Q13188 491 aa11.75□□□□□ -0.53
SNX13-203ENST00000428135 PHF8Q9UPP1 1060 aa11.75□□□□□ -0.53
SNX13-203ENST00000428135 TOM1O60784 492 aa11.75□□□□□ -0.53
SNX13-203ENST00000428135 CABLES1Q8TDN4 633 aa11.75□□□□□ -0.53
SNX13-203ENST00000428135 PIBF1Q8WXW3 757 aa11.75□□□□□ -0.53
SNX13-203ENST00000428135 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
SNX13-203ENST00000428135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNX13-203ENST00000428135 MCM10Q7L590 875 aa11.75□□□□□ -0.53
SNX13-203ENST00000428135 KRT28Q7Z3Y7 464 aa11.75□□□□□ -0.53
SNX13-203ENST00000428135 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
SNX13-203ENST00000428135 C22orf23Q9BZE7 217 aa11.75□□□□□ -0.53
SNX13-203ENST00000428135 MPHOSPH8Q99549 860 aa11.74□□□□□ -0.53
SNX13-203ENST00000428135 ATP10BO94823 1461 aa11.74□□□□□ -0.53
SNX13-203ENST00000428135 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
SNX13-203ENST00000428135 SAFBQ15424 915 aaKnown RBP eCLIP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms