RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CRYBG1Q9Y4K1 1723 aa21.09■□□□□ 0.97
RTN4-210ENST00000427710 CLSPNQ9HAW4 1339 aa21.08■□□□□ 0.97
RTN4-210ENST00000427710 RXRBP28702 533 aa21.08■□□□□ 0.97
RTN4-210ENST00000427710 FNBP4Q8N3X1 1017 aaPredicted RBP21.07■□□□□ 0.96
RTN4-210ENST00000427710 PLCH1Q4KWH8 1693 aa21.06■□□□□ 0.96
RTN4-210ENST00000427710 AKAP12Q02952 1782 aa21.05■□□□□ 0.96
RTN4-210ENST00000427710 ST20-MTHFSA0A0A6YYL1 179 aa21.04■□□□□ 0.96
RTN4-210ENST00000427710 BCL9LQ86UU0 1499 aa21.04■□□□□ 0.96
RTN4-210ENST00000427710 PHRF1Q9P1Y6 1649 aaKnown RBP21.04■□□□□ 0.96
RTN4-210ENST00000427710 SBNO2Q9Y2G9 1366 aa21.02■□□□□ 0.96
RTN4-210ENST00000427710 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.02■□□□□ 0.96
RTN4-210ENST00000427710 ATRNO75882 1429 aa21.02■□□□□ 0.96
RTN4-210ENST00000427710 SLIT2O94813 1529 aa21.01■□□□□ 0.95
RTN4-210ENST00000427710 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
RTN4-210ENST00000427710 RBM6P78332 1123 aaKnown RBP21.01■□□□□ 0.95
RTN4-210ENST00000427710 ABTB2Q8N961 1025 aa21.01■□□□□ 0.95
RTN4-210ENST00000427710 TRPC5Q9UL62 973 aaPredicted RBP21.01■□□□□ 0.95
RTN4-210ENST00000427710 USP6P35125 1406 aa21■□□□□ 0.95
RTN4-210ENST00000427710 ATAD2Q6PL18 1390 aa20.99■□□□□ 0.95
RTN4-210ENST00000427710 USP47Q96K76 1375 aa20.99■□□□□ 0.95
RTN4-210ENST00000427710 NWD2Q9ULI1 1742 aa20.99■□□□□ 0.95
RTN4-210ENST00000427710 UNC5CLQ8IV45 518 aa20.99■□□□□ 0.95
RTN4-210ENST00000427710 TESK2Q96S53 571 aa20.99■□□□□ 0.95
RTN4-210ENST00000427710 TIMELESSQ9UNS1 1208 aa20.99■□□□□ 0.95
RTN4-210ENST00000427710 RGS12O14924 1447 aa20.98■□□□□ 0.95
RTN4-210ENST00000427710 COL14A1Q05707 1796 aaKnown RBP20.97■□□□□ 0.95
RTN4-210ENST00000427710 TMC1Q8TDI8 760 aa20.97■□□□□ 0.95
RTN4-210ENST00000427710 NRAPQ86VF7 1730 aa20.97■□□□□ 0.95
RTN4-210ENST00000427710 PIK3C2AO00443 1686 aa20.96■□□□□ 0.95
RTN4-210ENST00000427710 MON2Q7Z3U7 1717 aa20.96■□□□□ 0.95
RTN4-210ENST00000427710 ZC3H6P61129 1189 aaKnown RBP20.96■□□□□ 0.95
RTN4-210ENST00000427710 NRKQ7Z2Y5 1582 aa20.95■□□□□ 0.94
RTN4-210ENST00000427710 CHRNA2Q15822 529 aa20.95■□□□□ 0.94
RTN4-210ENST00000427710 SLC12A5Q9H2X9 1139 aa20.95■□□□□ 0.94
RTN4-210ENST00000427710 CDK12Q9NYV4 1490 aaPredicted RBP20.94■□□□□ 0.94
RTN4-210ENST00000427710 GLI3P10071 1580 aa20.94■□□□□ 0.94
RTN4-210ENST00000427710 KIAA0232Q92628 1395 aa20.94■□□□□ 0.94
RTN4-210ENST00000427710 SSH2Q76I76 1423 aa20.94■□□□□ 0.94
RTN4-210ENST00000427710 GJD4Q96KN9 370 aaPredicted RBP20.93■□□□□ 0.94
RTN4-210ENST00000427710 PRDM11Q9NQV5 511 aa20.93■□□□□ 0.94
RTN4-210ENST00000427710 BTG4Q9NY30 223 aa20.93■□□□□ 0.94
RTN4-210ENST00000427710 TTC21BQ7Z4L5 1316 aa20.93■□□□□ 0.94
RTN4-210ENST00000427710 KTN1Q86UP2 1357 aaKnown RBP20.93■□□□□ 0.94
RTN4-210ENST00000427710 NLRP6P59044 892 aa20.92■□□□□ 0.94
RTN4-210ENST00000427710 CCDC9Q9Y3X0 531 aaKnown RBP20.92■□□□□ 0.94
RTN4-210ENST00000427710 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
RTN4-210ENST00000427710 CD163L1Q9NR16 1453 aa20.92■□□□□ 0.94
RTN4-210ENST00000427710 USP19O94966 1318 aa20.91■□□□□ 0.94
RTN4-210ENST00000427710 BRWD3Q6RI45 1802 aa20.91■□□□□ 0.94
RTN4-210ENST00000427710 NLRP13Q86W25 1043 aa20.91■□□□□ 0.94
RTN4-210ENST00000427710 ZNF692Q9BU19 519 aaPredicted RBP20.91■□□□□ 0.94
RTN4-210ENST00000427710 BRD4O60885 1362 aaPredicted RBP20.9■□□□□ 0.94
RTN4-210ENST00000427710 ZBTB7CA1YPR0 619 aa20.9■□□□□ 0.94
RTN4-210ENST00000427710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.941e-7■■■□□ 14.8
RTN4-210ENST00000427710 VPS72Q15906 364 aa20.89■□□□□ 0.93
RTN4-210ENST00000427710 ZRANB1Q9UGI0 708 aa20.89■□□□□ 0.93
RTN4-210ENST00000427710 SOX12O15370 315 aa20.87■□□□□ 0.93
RTN4-210ENST00000427710 GCP02774 474 aa20.87■□□□□ 0.93
RTN4-210ENST00000427710 RGPD5Q99666 1765 aa20.87■□□□□ 0.93
RTN4-210ENST00000427710 TMF1P82094 1093 aa20.86■□□□□ 0.93
RTN4-210ENST00000427710 HDGFL2Q7Z4V5 671 aaPredicted RBP20.86■□□□□ 0.93
RTN4-210ENST00000427710 STRN4Q9NRL3 753 aa20.86■□□□□ 0.93
RTN4-210ENST00000427710 SLIT3O75094 1523 aa20.86■□□□□ 0.93
RTN4-210ENST00000427710 A0A1W2PP64 1363 aa20.85■□□□□ 0.93
RTN4-210ENST00000427710 PUS7Q96PZ0 661 aaKnown RBP20.85■□□□□ 0.93
RTN4-210ENST00000427710 TTC21AQ8NDW8 1320 aa20.84■□□□□ 0.93
RTN4-210ENST00000427710 NME9Q86XW9 330 aa20.84■□□□□ 0.93
RTN4-210ENST00000427710 LMO7Q8WWI1 1683 aa20.83■□□□□ 0.93
RTN4-210ENST00000427710 CAMTA1Q9Y6Y1 1673 aa20.83■□□□□ 0.93
RTN4-210ENST00000427710 UPF1Q92900 1129 aaKnown RBP eCLIP20.83■□□□□ 0.93
RTN4-210ENST00000427710 TERF2IPQ9NYB0 399 aa20.82■□□□□ 0.92
RTN4-210ENST00000427710 CPDO75976 1380 aa20.82■□□□□ 0.92
RTN4-210ENST00000427710 COL18A1P39060 1754 aa20.82■□□□□ 0.92
RTN4-210ENST00000427710 SLC24A1O60721 1099 aa20.8■□□□□ 0.92
RTN4-210ENST00000427710 HSPA5P11021 654 aaKnown RBP20.8■□□□□ 0.92
RTN4-210ENST00000427710 FAM98CQ17RN3 349 aaKnown RBP20.8■□□□□ 0.92
RTN4-210ENST00000427710 SEPT12Q8IYM1 358 aa20.8■□□□□ 0.92
RTN4-210ENST00000427710 MYOM1P52179 1685 aa20.8■□□□□ 0.92
RTN4-210ENST00000427710 SPATA31A5Q5VU36 1347 aa20.79■□□□□ 0.92
RTN4-210ENST00000427710 SPATA31A7Q8IWB4 1347 aa20.79■□□□□ 0.92
RTN4-210ENST00000427710 EDC4Q6P2E9 1401 aaKnown RBP20.79■□□□□ 0.92
RTN4-210ENST00000427710 A0A0G2JS52 829 aa20.79■□□□□ 0.92
RTN4-210ENST00000427710 EVA1CP58658 441 aa20.79■□□□□ 0.92
RTN4-210ENST00000427710 MYT1Q01538 1121 aa20.79■□□□□ 0.92
RTN4-210ENST00000427710 USP54Q70EL1 1684 aa20.79■□□□□ 0.92
RTN4-210ENST00000427710 LTN1O94822 1766 aa20.78■□□□□ 0.92
RTN4-210ENST00000427710 POLR3GLQ9BT43 218 aa20.78■□□□□ 0.92
RTN4-210ENST00000427710 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
RTN4-210ENST00000427710 LARP1Q6PKG0 1096 aaKnown RBP20.77■□□□□ 0.92
RTN4-210ENST00000427710 USP35Q9P2H5 1018 aa20.77■□□□□ 0.92
RTN4-210ENST00000427710 NFAT5O94916 1531 aa20.77■□□□□ 0.92
RTN4-210ENST00000427710 USP31Q70CQ4 1352 aa20.76■□□□□ 0.91
RTN4-210ENST00000427710 EIF4G2P78344 907 aaKnown RBP eCLIP20.76■□□□□ 0.91
RTN4-210ENST00000427710 SPATA31A1Q5TZJ5 1347 aa20.76■□□□□ 0.91
RTN4-210ENST00000427710 ANKRD36BQ8N2N9 1353 aa20.75■□□□□ 0.91
RTN4-210ENST00000427710 EP400Q96L91 3159 aa20.75■□□□□ 0.91
RTN4-210ENST00000427710 ONECUT3O60422 494 aaPredicted RBP20.74■□□□□ 0.91
RTN4-210ENST00000427710 CDCA8Q53HL2 280 aa20.74■□□□□ 0.91
RTN4-210ENST00000427710 ARHGEF25Q86VW2 580 aa20.74■□□□□ 0.91
RTN4-210ENST00000427710 KCNH5Q8NCM2 988 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms