RNA–Protein interactions for RNA: ENST00000426856.1

CRIM1-203, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-203ENST00000426856 STAC3Q96MF2 364 aa22.28■■□□□ 1.16
CRIM1-203ENST00000426856 BTG4Q9NY30 223 aa22.28■■□□□ 1.16
CRIM1-203ENST00000426856 ITSN1Q15811 1721 aa22.28■■□□□ 1.16
CRIM1-203ENST00000426856 NGDNQ8NEJ9 315 aaKnown RBP22.27■■□□□ 1.16
CRIM1-203ENST00000426856 HRCP23327 699 aa22.26■■□□□ 1.15
CRIM1-203ENST00000426856 FAM98CQ17RN3 349 aaKnown RBP22.25■■□□□ 1.15
CRIM1-203ENST00000426856 A0A0G2JS52 829 aa22.24■■□□□ 1.15
CRIM1-203ENST00000426856 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
CRIM1-203ENST00000426856 MYT1Q01538 1121 aa22.24■■□□□ 1.15
CRIM1-203ENST00000426856 NUDT16Q96DE0 195 aaKnown RBP22.23■■□□□ 1.15
CRIM1-203ENST00000426856 SF3B2Q13435 895 aaKnown RBP22.22■■□□□ 1.15
CRIM1-203ENST00000426856 TOPAZ1Q8N9V7 1692 aa22.22■■□□□ 1.15
CRIM1-203ENST00000426856 PHRF1Q9P1Y6 1649 aaKnown RBP22.21■■□□□ 1.15
CRIM1-203ENST00000426856 KIAA1210Q9ULL0 1709 aa22.2■■□□□ 1.14
CRIM1-203ENST00000426856 SPATA31A5Q5VU36 1347 aa22.2■■□□□ 1.14
CRIM1-203ENST00000426856 SPATA31A7Q8IWB4 1347 aa22.2■■□□□ 1.14
CRIM1-203ENST00000426856 THSD7AQ9UPZ6 1657 aa22.2■■□□□ 1.14
CRIM1-203ENST00000426856 PRDM11Q9NQV5 511 aa22.19■■□□□ 1.14
CRIM1-203ENST00000426856 KIAA0232Q92628 1395 aa22.18■■□□□ 1.14
CRIM1-203ENST00000426856 CDK19Q9BWU1 502 aa22.18■■□□□ 1.14
CRIM1-203ENST00000426856 POLR3AO14802 1390 aaPredicted RBP22.16■■□□□ 1.14
CRIM1-203ENST00000426856 FAM182BQ5T319 152 aa22.16■■□□□ 1.14
CRIM1-203ENST00000426856 CHRNA2Q15822 529 aa22.15■■□□□ 1.14
CRIM1-203ENST00000426856 RGPD1P0DJD0 1748 aa22.14■■□□□ 1.14
CRIM1-203ENST00000426856 ACEP12821 1306 aa22.14■■□□□ 1.14
CRIM1-203ENST00000426856 NBPF1Q3BBV0 1214 aa22.14■■□□□ 1.13
CRIM1-203ENST00000426856 NUTM2GQ5VZR2 741 aa22.14■■□□□ 1.13
CRIM1-203ENST00000426856 BAG6P46379 1132 aa22.13■■□□□ 1.13
CRIM1-203ENST00000426856 NRKQ7Z2Y5 1582 aa22.12■■□□□ 1.13
CRIM1-203ENST00000426856 ZC3H6P61129 1189 aaKnown RBP22.12■■□□□ 1.13
CRIM1-203ENST00000426856 NBPF8Q3BBV2 869 aa22.12■■□□□ 1.13
CRIM1-203ENST00000426856 CCDC61Q9Y6R9 512 aa22.12■■□□□ 1.13
CRIM1-203ENST00000426856 TNS1Q9HBL0 1735 aaKnown RBP22.11■■□□□ 1.13
CRIM1-203ENST00000426856 SPATA31A1Q5TZJ5 1347 aa22.11■■□□□ 1.13
CRIM1-203ENST00000426856 LRP5O75197 1615 aa22.1■■□□□ 1.13
CRIM1-203ENST00000426856 PLEKHG3A1L390 1219 aa22.1■■□□□ 1.13
CRIM1-203ENST00000426856 STRN4Q9NRL3 753 aa22.1■■□□□ 1.13
CRIM1-203ENST00000426856 PSDA5PKW4 1024 aaPredicted RBP22.08■■□□□ 1.13
CRIM1-203ENST00000426856 EN1Q05925 392 aaPredicted RBP22.08■■□□□ 1.13
CRIM1-203ENST00000426856 LMO7Q8WWI1 1683 aa22.07■■□□□ 1.12
CRIM1-203ENST00000426856 CAMTA1Q9Y6Y1 1673 aa22.07■■□□□ 1.12
CRIM1-203ENST00000426856 SSH2Q76I76 1423 aa22.06■■□□□ 1.12
CRIM1-203ENST00000426856 QRICH2Q9H0J4 1663 aa22.06■■□□□ 1.12
CRIM1-203ENST00000426856 DISP2A7MBM2 1401 aa22.06■■□□□ 1.12
CRIM1-203ENST00000426856 PPIP5K1Q6PFW1 1433 aa22.06■■□□□ 1.12
CRIM1-203ENST00000426856 USP19O94966 1318 aa22.06■■□□□ 1.12
CRIM1-203ENST00000426856 ABTB2Q8N961 1025 aa22.05■■□□□ 1.12
CRIM1-203ENST00000426856 CENPJQ9HC77 1338 aaPredicted RBP22.05■■□□□ 1.12
CRIM1-203ENST00000426856 SRPK2P78362 688 aaKnown RBP22.04■■□□□ 1.12
CRIM1-203ENST00000426856 USP35Q9P2H5 1018 aa22.04■■□□□ 1.12
CRIM1-203ENST00000426856 CPDO75976 1380 aa22.03■■□□□ 1.12
CRIM1-203ENST00000426856 CABP2Q9NPB3 220 aa22.03■■□□□ 1.12
CRIM1-203ENST00000426856 LARP1Q6PKG0 1096 aaKnown RBP22.01■■□□□ 1.11
CRIM1-203ENST00000426856 TRIM37O94972 964 aa22■■□□□ 1.11
CRIM1-203ENST00000426856 EVA1CP58658 441 aa22■■□□□ 1.11
CRIM1-203ENST00000426856 BARGINQ6ZT62 677 aa22■■□□□ 1.11
CRIM1-203ENST00000426856 EZH2Q15910 746 aaKnown RBP21.99■■□□□ 1.11
CRIM1-203ENST00000426856 FAM196AQ6ZSG2 479 aa21.99■■□□□ 1.11
CRIM1-203ENST00000426856 GCP02774 474 aa21.98■■□□□ 1.11
CRIM1-203ENST00000426856 NLRP13Q86W25 1043 aa21.98■■□□□ 1.11
CRIM1-203ENST00000426856 COL5A2P05997 1499 aaPredicted RBP21.97■■□□□ 1.11
CRIM1-203ENST00000426856 R3HDM1Q15032 1099 aaKnown RBP21.97■■□□□ 1.11
CRIM1-203ENST00000426856 L3MBTL2Q969R5 705 aa21.97■■□□□ 1.11
CRIM1-203ENST00000426856 USP6P35125 1406 aa21.97■■□□□ 1.11
CRIM1-203ENST00000426856 TRPM1Q7Z4N2 1603 aa21.96■■□□□ 1.11
CRIM1-203ENST00000426856 TCP11L2Q8N4U5 519 aa21.96■■□□□ 1.11
CRIM1-203ENST00000426856 CAMKK2Q96RR4 588 aa21.96■■□□□ 1.11
CRIM1-203ENST00000426856 CABP1Q9NZU7 370 aa21.95■■□□□ 1.1
CRIM1-203ENST00000426856 BRD4O60885 1362 aaPredicted RBP21.95■■□□□ 1.1
CRIM1-203ENST00000426856 PDE3BQ13370 1112 aa21.94■■□□□ 1.1
CRIM1-203ENST00000426856 SLIT3O75094 1523 aa21.94■■□□□ 1.1
CRIM1-203ENST00000426856 PIK3C2AO00443 1686 aa21.94■■□□□ 1.1
CRIM1-203ENST00000426856 PARP4Q9UKK3 1724 aaKnown RBP21.94■■□□□ 1.1
CRIM1-203ENST00000426856 APBA3O96018 575 aa21.93■■□□□ 1.1
CRIM1-203ENST00000426856 RREB1Q92766 1687 aa21.93■■□□□ 1.1
CRIM1-203ENST00000426856 NLRP6P59044 892 aa21.91■■□□□ 1.1
CRIM1-203ENST00000426856 SIN3AQ96ST3 1273 aa21.91■■□□□ 1.1
CRIM1-203ENST00000426856 NUP188Q5SRE5 1749 aa21.91■■□□□ 1.1
CRIM1-203ENST00000426856 CRB1P82279 1406 aa21.9■■□□□ 1.1
CRIM1-203ENST00000426856 PARD3Q8TEW0 1356 aa21.9■■□□□ 1.1
CRIM1-203ENST00000426856 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
CRIM1-203ENST00000426856 THRAP3Q9Y2W1 955 aaKnown RBP21.9■■□□□ 1.1
CRIM1-203ENST00000426856 COL18A1P39060 1754 aa21.89■■□□□ 1.1
CRIM1-203ENST00000426856 AATKQ6ZMQ8 1374 aa21.89■■□□□ 1.1
CRIM1-203ENST00000426856 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
CRIM1-203ENST00000426856 LRRC37A3O60309 1634 aa21.88■■□□□ 1.09
CRIM1-203ENST00000426856 AKAP12Q02952 1782 aa21.87■■□□□ 1.09
CRIM1-203ENST00000426856 PEAK1Q9H792 1746 aa21.87■■□□□ 1.09
CRIM1-203ENST00000426856 ROCK2O75116 1388 aaKnown RBP21.86■■□□□ 1.09
CRIM1-203ENST00000426856 WNK3Q9BYP7 1800 aa21.85■■□□□ 1.09
CRIM1-203ENST00000426856 CPSF1Q10570 1443 aaKnown RBP21.83■■□□□ 1.09
CRIM1-203ENST00000426856 NEUROD1Q13562 356 aa21.83■■□□□ 1.09
CRIM1-203ENST00000426856 AXIN2Q9Y2T1 843 aa21.83■■□□□ 1.09
CRIM1-203ENST00000426856 SBF2Q86WG5 1849 aa21.83■■□□□ 1.08
CRIM1-203ENST00000426856 TTC21BQ7Z4L5 1316 aa21.82■■□□□ 1.08
CRIM1-203ENST00000426856 OVOS2A0A0G2JMS6 1433 aa21.82■■□□□ 1.08
CRIM1-203ENST00000426856 OVOS2A0A0J9YW53 1432 aa21.82■■□□□ 1.08
CRIM1-203ENST00000426856 OVOS2Q6IE36 1432 aa21.82■■□□□ 1.08
CRIM1-203ENST00000426856 RGPD5Q99666 1765 aa21.82■■□□□ 1.08
CRIM1-203ENST00000426856 TOM1L2Q6ZVM7 507 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms