RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 CENPJQ9HC77 1338 aaPredicted RBP35.98■■■■□ 3.35
PTPMT1-203ENST00000426530 FAM83GA6ND36 823 aa35.96■■■■□ 3.35
PTPMT1-203ENST00000426530 NRAPQ86VF7 1730 aa35.94■■■■□ 3.34
PTPMT1-203ENST00000426530 ACEP12821 1306 aa35.92■■■■□ 3.34
PTPMT1-203ENST00000426530 CCDC61Q9Y6R9 512 aa35.92■■■■□ 3.34
PTPMT1-203ENST00000426530 BRWD3Q6RI45 1802 aa35.92■■■■□ 3.34
PTPMT1-203ENST00000426530 COL14A1Q05707 1796 aaKnown RBP35.92■■■■□ 3.34
PTPMT1-203ENST00000426530 POLR3AO14802 1390 aaPredicted RBP35.91■■■■□ 3.34
PTPMT1-203ENST00000426530 SRPK2P78362 688 aaKnown RBP35.91■■■■□ 3.34
PTPMT1-203ENST00000426530 CCDC9Q9Y3X0 531 aaKnown RBP35.91■■■■□ 3.34
PTPMT1-203ENST00000426530 PHRF1Q9P1Y6 1649 aaKnown RBP35.9■■■■□ 3.34
PTPMT1-203ENST00000426530 VPS72Q15906 364 aa35.9■■■■□ 3.34
PTPMT1-203ENST00000426530 CABP2Q9NPB3 220 aa35.89■■■■□ 3.34
PTPMT1-203ENST00000426530 EP400Q96L91 3159 aa35.88■■■■□ 3.33
PTPMT1-203ENST00000426530 NBPF8Q3BBV2 869 aa35.87■■■■□ 3.33
PTPMT1-203ENST00000426530 NUTM2GQ5VZR2 741 aa35.87■■■■□ 3.33
PTPMT1-203ENST00000426530 PPIP5K1Q6PFW1 1433 aa35.87■■■■□ 3.33
PTPMT1-203ENST00000426530 PLEKHG3A1L390 1219 aa35.86■■■■□ 3.33
PTPMT1-203ENST00000426530 BTG4Q9NY30 223 aa35.86■■■■□ 3.33
PTPMT1-203ENST00000426530 ROCK2O75116 1388 aaKnown RBP35.86■■■■□ 3.33
PTPMT1-203ENST00000426530 SEPT12Q8IYM1 358 aa35.81■■■■□ 3.32
PTPMT1-203ENST00000426530 PRDM11Q9NQV5 511 aa35.8■■■■□ 3.32
PTPMT1-203ENST00000426530 KIAA0232Q92628 1395 aa35.78■■■■□ 3.32
PTPMT1-203ENST00000426530 NRKQ7Z2Y5 1582 aa35.76■■■■□ 3.32
PTPMT1-203ENST00000426530 CHRNA2Q15822 529 aa35.76■■■■□ 3.32
PTPMT1-203ENST00000426530 ZC3H6P61129 1189 aaKnown RBP35.75■■■■□ 3.31
PTPMT1-203ENST00000426530 ABTB2Q8N961 1025 aa35.74■■■■□ 3.31
PTPMT1-203ENST00000426530 A0A0G2JS52 829 aa35.73■■■■□ 3.31
PTPMT1-203ENST00000426530 MYT1Q01538 1121 aa35.73■■■■□ 3.31
PTPMT1-203ENST00000426530 CABP1Q9NZU7 370 aa35.73■■■■□ 3.31
PTPMT1-203ENST00000426530 FAM98CQ17RN3 349 aaKnown RBP35.72■■■■□ 3.31
PTPMT1-203ENST00000426530 ONECUT3O60422 494 aaPredicted RBP35.71■■■■□ 3.31
PTPMT1-203ENST00000426530 EVC2Q86UK5 1308 aa35.71■■■■□ 3.31
PTPMT1-203ENST00000426530 TONSLQ96HA7 1378 aa35.68■■■■□ 3.3
PTPMT1-203ENST00000426530 TRIM26Q12899 539 aaPredicted RBP35.68■■■■□ 3.3
PTPMT1-203ENST00000426530 USP6P35125 1406 aa35.67■■■■□ 3.3
PTPMT1-203ENST00000426530 USP19O94966 1318 aa35.66■■■■□ 3.3
PTPMT1-203ENST00000426530 SPATA31A5Q5VU36 1347 aa35.66■■■■□ 3.3
PTPMT1-203ENST00000426530 SPATA31A7Q8IWB4 1347 aa35.66■■■■□ 3.3
PTPMT1-203ENST00000426530 KRT27Q7Z3Y8 459 aa35.66■■■■□ 3.3
PTPMT1-203ENST00000426530 STRN4Q9NRL3 753 aa35.65■■■■□ 3.3
PTPMT1-203ENST00000426530 BLMP54132 1417 aaPredicted RBP35.63■■■■□ 3.29
PTPMT1-203ENST00000426530 CCDC125Q86Z20 511 aa35.62■■■■□ 3.29
PTPMT1-203ENST00000426530 THSD7AQ9UPZ6 1657 aa35.62■■■■□ 3.29
PTPMT1-203ENST00000426530 CARD11Q9BXL7 1154 aa35.61■■■■□ 3.29
PTPMT1-203ENST00000426530 PIK3C2AO00443 1686 aa35.61■■■■□ 3.29
PTPMT1-203ENST00000426530 LMO7Q8WWI1 1683 aa35.6■■■■□ 3.29
PTPMT1-203ENST00000426530 NLRP13Q86W25 1043 aa35.6■■■■□ 3.29
PTPMT1-203ENST00000426530 AKAP12Q02952 1782 aa35.6■■■■□ 3.29
PTPMT1-203ENST00000426530 CAMTA1Q9Y6Y1 1673 aa35.59■■■■□ 3.29
PTPMT1-203ENST00000426530 BRD4O60885 1362 aaPredicted RBP35.58■■■■□ 3.29
PTPMT1-203ENST00000426530 SSH2Q76I76 1423 aa35.57■■■■□ 3.29
PTPMT1-203ENST00000426530 CPDO75976 1380 aa35.57■■■■□ 3.28
PTPMT1-203ENST00000426530 SPATA31A1Q5TZJ5 1347 aa35.57■■■■□ 3.28
PTPMT1-203ENST00000426530 GCP02774 474 aa35.56■■■■□ 3.28
PTPMT1-203ENST00000426530 NLRP6P59044 892 aa35.54■■■■□ 3.28
PTPMT1-203ENST00000426530 FAM182BQ5T319 152 aa35.54■■■■□ 3.28
PTPMT1-203ENST00000426530 DEFB132Q7Z7B7 95 aa35.54■■■■□ 3.28
PTPMT1-203ENST00000426530 USP35Q9P2H5 1018 aa35.54■■■■□ 3.28
PTPMT1-203ENST00000426530 SLIT3O75094 1523 aa35.53■■■■□ 3.28
PTPMT1-203ENST00000426530 ZBTB7CA1YPR0 619 aa35.53■■■■□ 3.28
PTPMT1-203ENST00000426530 EVA1CP58658 441 aa35.52■■■■□ 3.28
PTPMT1-203ENST00000426530 SBNO2Q9Y2G9 1366 aa35.51■■■■□ 3.28
PTPMT1-203ENST00000426530 SF3B2Q13435 895 aaKnown RBP35.49■■■■□ 3.27
PTPMT1-203ENST00000426530 LARP1Q6PKG0 1096 aaKnown RBP35.49■■■■□ 3.27
PTPMT1-203ENST00000426530 MON2Q7Z3U7 1717 aa35.47■■■■□ 3.27
PTPMT1-203ENST00000426530 TTC21BQ7Z4L5 1316 aa35.47■■■■□ 3.27
PTPMT1-203ENST00000426530 CPSF1Q10570 1443 aaKnown RBP35.46■■■■□ 3.27
PTPMT1-203ENST00000426530 COL5A2P05997 1499 aaPredicted RBP35.46■■■■□ 3.27
PTPMT1-203ENST00000426530 ZRANB1Q9UGI0 708 aa35.45■■■■□ 3.27
PTPMT1-203ENST00000426530 KTN1Q86UP2 1357 aaKnown RBP35.44■■■■□ 3.26
PTPMT1-203ENST00000426530 ZNF692Q9BU19 519 aaPredicted RBP35.43■■■■□ 3.26
PTPMT1-203ENST00000426530 RGPD1P0DJD0 1748 aa35.42■■■■□ 3.26
PTPMT1-203ENST00000426530 SOX12O15370 315 aa35.41■■■■□ 3.26
PTPMT1-203ENST00000426530 COL18A1P39060 1754 aa35.41■■■■□ 3.26
PTPMT1-203ENST00000426530 CD163L1Q9NR16 1453 aa35.39■■■■□ 3.26
PTPMT1-203ENST00000426530 TTC21AQ8NDW8 1320 aa35.38■■■■□ 3.25
PTPMT1-203ENST00000426530 TNS1Q9HBL0 1735 aaKnown RBP35.38■■■■□ 3.25
PTPMT1-203ENST00000426530 BARGINQ6ZT62 677 aa35.37■■■■□ 3.25
PTPMT1-203ENST00000426530 TMC1Q8TDI8 760 aa35.37■■■■□ 3.25
PTPMT1-203ENST00000426530 AATKQ6ZMQ8 1374 aa35.37■■■■□ 3.25
PTPMT1-203ENST00000426530 TCP11L2Q8N4U5 519 aa35.36■■■■□ 3.25
PTPMT1-203ENST00000426530 RGPD5Q99666 1765 aa35.36■■■■□ 3.25
PTPMT1-203ENST00000426530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.34■■■■□ 3.25
PTPMT1-203ENST00000426530 CRB1P82279 1406 aa35.33■■■■□ 3.25
PTPMT1-203ENST00000426530 BAG6P46379 1132 aa35.33■■■■□ 3.25
PTPMT1-203ENST00000426530 NFAT5O94916 1531 aa35.32■■■■□ 3.25
PTPMT1-203ENST00000426530 SLC12A5Q9H2X9 1139 aa35.32■■■■□ 3.24
PTPMT1-203ENST00000426530 AXIN2Q9Y2T1 843 aa35.31■■■■□ 3.24
PTPMT1-203ENST00000426530 PARP4Q9UKK3 1724 aaKnown RBP35.31■■■■□ 3.24
PTPMT1-203ENST00000426530 ST20-MTHFSA0A0A6YYL1 179 aa35.3■■■■□ 3.24
PTPMT1-203ENST00000426530 ARHGEF25Q86VW2 580 aa35.29■■■■□ 3.24
PTPMT1-203ENST00000426530 KCNH5Q8NCM2 988 aa35.29■■■■□ 3.24
PTPMT1-203ENST00000426530 SRCAPQ6ZRS2 3230 aa35.28■■■■□ 3.24
PTPMT1-203ENST00000426530 EN1Q05925 392 aaPredicted RBP35.28■■■■□ 3.24
PTPMT1-203ENST00000426530 PDE3BQ13370 1112 aa35.28■■■■□ 3.24
PTPMT1-203ENST00000426530 NME9Q86XW9 330 aa35.28■■■■□ 3.24
PTPMT1-203ENST00000426530 TESK2Q96S53 571 aa35.28■■■■□ 3.24
PTPMT1-203ENST00000426530 USP54Q70EL1 1684 aa35.27■■■■□ 3.24
PTPMT1-203ENST00000426530 THRAP3Q9Y2W1 955 aaKnown RBP35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms