RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 HFM1A2PYH4 1435 aa9.59□□□□□ -0.87
CTNND1-207ENST00000426142 DAPK1P53355 1430 aa9.59□□□□□ -0.87
CTNND1-207ENST00000426142 CDC45O75419 566 aa9.59□□□□□ -0.87
CTNND1-207ENST00000426142 ZNF530Q6P9A1 599 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-207ENST00000426142 SIL1Q9H173 461 aa9.59□□□□□ -0.87
CTNND1-207ENST00000426142 ANKLE2Q86XL3 938 aa9.59□□□□□ -0.87
CTNND1-207ENST00000426142 CNTROBQ8N137 903 aa9.59□□□□□ -0.87
CTNND1-207ENST00000426142 PLEKHH2Q8IVE3 1493 aa9.59□□□□□ -0.87
CTNND1-207ENST00000426142 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
CTNND1-207ENST00000426142 STK11IPQ8N1F8 1099 aa9.59□□□□□ -0.87
CTNND1-207ENST00000426142 CLASRPQ8N2M8 674 aaKnown RBP9.58□□□□□ -0.88
CTNND1-207ENST00000426142 ZNF592Q92610 1267 aa9.58□□□□□ -0.88
CTNND1-207ENST00000426142 NINLQ9Y2I6 1382 aa9.58□□□□□ -0.88
CTNND1-207ENST00000426142 GNAI3P08754 354 aa9.58□□□□□ -0.88
CTNND1-207ENST00000426142 MAP4K4O95819 1239 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-207ENST00000426142 TPM1P09493 284 aa9.58□□□□□ -0.88
CTNND1-207ENST00000426142 GOLGA6L1Q8N7Z2 621 aa9.58□□□□□ -0.88
CTNND1-207ENST00000426142 CNNM1Q9NRU3 951 aa9.58□□□□□ -0.88
CTNND1-207ENST00000426142 SUPT6HQ7KZ85 1726 aaKnown RBP9.58□□□□□ -0.88
CTNND1-207ENST00000426142 GSE1Q14687 1217 aa9.58□□□□□ -0.88
CTNND1-207ENST00000426142 CCDC43Q96MW1 224 aaKnown RBP9.57□□□□□ -0.88
CTNND1-207ENST00000426142 SLC52A1Q9NWF4 448 aa9.57□□□□□ -0.88
CTNND1-207ENST00000426142 IKQ13123 557 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-207ENST00000426142 CHMP5Q9NZZ3 219 aa9.57□□□□□ -0.88
CTNND1-207ENST00000426142 ARHGEF11O15085 1522 aa9.57□□□□□ -0.88
CTNND1-207ENST00000426142 TIAM1Q13009 1591 aa9.57□□□□□ -0.88
CTNND1-207ENST00000426142 ZC3H6P61129 1189 aaKnown RBP9.57□□□□□ -0.88
CTNND1-207ENST00000426142 ZNF692Q9BU19 519 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-207ENST00000426142 SAFBQ15424 915 aaKnown RBP eCLIP9.57□□□□□ -0.88
CTNND1-207ENST00000426142 RRP12Q5JTH9 1297 aaKnown RBP9.57□□□□□ -0.88
CTNND1-207ENST00000426142 CCDC47Q96A33 483 aaKnown RBP9.57□□□□□ -0.88
CTNND1-207ENST00000426142 TBC1D2BQ9UPU7 963 aa9.57□□□□□ -0.88
CTNND1-207ENST00000426142 SF3B2Q13435 895 aaKnown RBP9.56□□□□□ -0.88
CTNND1-207ENST00000426142 TTC39AQ5SRH9 613 aa9.56□□□□□ -0.88
CTNND1-207ENST00000426142 DNMBPQ6XZF7 1577 aa9.56□□□□□ -0.88
CTNND1-207ENST00000426142 PDZRN3Q9UPQ7 1066 aa9.56□□□□□ -0.88
CTNND1-207ENST00000426142 PRXQ9BXM0 1461 aa9.56□□□□□ -0.88
CTNND1-207ENST00000426142 GNAI2P04899 355 aa9.56□□□□□ -0.88
CTNND1-207ENST00000426142 WAPLQ7Z5K2 1190 aa9.56□□□□□ -0.88
CTNND1-207ENST00000426142 PRDM11Q9NQV5 511 aa9.56□□□□□ -0.88
CTNND1-207ENST00000426142 SPG7Q9UQ90 795 aa9.55□□□□□ -0.88
CTNND1-207ENST00000426142 ATP2B1P20020 1258 aa9.55□□□□□ -0.88
CTNND1-207ENST00000426142 DNAJC5BQ9UF47 199 aa9.55□□□□□ -0.88
CTNND1-207ENST00000426142 MIS18AQ9NYP9 233 aa9.55□□□□□ -0.88
CTNND1-207ENST00000426142 HOOK1Q9UJC3 728 aaKnown RBP9.55□□□□□ -0.88
CTNND1-207ENST00000426142 HMGXB3Q12766 1538 aa9.55□□□□□ -0.88
CTNND1-207ENST00000426142 AKNAQ7Z591 1439 aa9.54□□□□□ -0.88
CTNND1-207ENST00000426142 SASS6Q6UVJ0 657 aa9.54□□□□□ -0.88
CTNND1-207ENST00000426142 BTBD11A6QL63 1104 aa9.54□□□□□ -0.88
CTNND1-207ENST00000426142 EPRSP07814 1512 aaKnown RBP9.54□□□□□ -0.88
CTNND1-207ENST00000426142 PSMA5P28066 241 aa9.54□□□□□ -0.88
CTNND1-207ENST00000426142 CCDC73Q6ZRK6 1079 aa9.54□□□□□ -0.88
CTNND1-207ENST00000426142 ANKRD20A12PQ8NF67 263 aa9.54□□□□□ -0.88
CTNND1-207ENST00000426142 NUDT16Q96DE0 195 aaKnown RBP9.54□□□□□ -0.88
CTNND1-207ENST00000426142 BICDL1Q6ZP65 573 aa9.53□□□□□ -0.88
CTNND1-207ENST00000426142 NUCB2P80303 420 aa9.53□□□□□ -0.88
CTNND1-207ENST00000426142 CCDC184Q52MB2 194 aa9.53□□□□□ -0.88
CTNND1-207ENST00000426142 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-207ENST00000426142 BCL11BQ9C0K0 894 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-207ENST00000426142 CCDC158Q5M9N0 1113 aa9.53□□□□□ -0.88
CTNND1-207ENST00000426142 SPINK5Q9NQ38 1064 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-207ENST00000426142 NEK4P51957 841 aa9.53□□□□□ -0.88
CTNND1-207ENST00000426142 BRMS1Q9HCU9 246 aa9.53□□□□□ -0.88
CTNND1-207ENST00000426142 POGZQ7Z3K3 1410 aa9.52□□□□□ -0.88
CTNND1-207ENST00000426142 NSD3Q9BZ95 1437 aa9.52□□□□□ -0.88
CTNND1-207ENST00000426142 ATP2B2Q01814 1243 aa9.52□□□□□ -0.88
CTNND1-207ENST00000426142 SRCIN1Q9C0H9 1055 aa9.52□□□□□ -0.89
CTNND1-207ENST00000426142 STK3Q13188 491 aa9.52□□□□□ -0.89
CTNND1-207ENST00000426142 AAMPQ13685 434 aa9.52□□□□□ -0.89
CTNND1-207ENST00000426142 SART3Q15020 963 aaKnown RBP9.52□□□□□ -0.89
CTNND1-207ENST00000426142 USHBP1Q8N6Y0 703 aa9.52□□□□□ -0.89
CTNND1-207ENST00000426142 IQGAP2Q13576 1575 aa9.52□□□□□ -0.89
CTNND1-207ENST00000426142 IPO7O95373 1038 aaKnown RBP9.51□□□□□ -0.89
CTNND1-207ENST00000426142 CEBPZQ03701 1054 aaKnown RBP9.51□□□□□ -0.89
CTNND1-207ENST00000426142 ERC1Q8IUD2 1116 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 THUMPD2Q9BTF0 503 aaKnown RBP9.51□□□□□ -0.89
CTNND1-207ENST00000426142 PLB1Q6P1J6 1458 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 HOMER1Q86YM7 354 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-207ENST00000426142 PCF11O94913 1555 aaKnown RBP9.51□□□□□ -0.89
CTNND1-207ENST00000426142 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
CTNND1-207ENST00000426142 RPGRIP1LQ68CZ1 1315 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 LRRCC1Q9C099 1032 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 CD109Q6YHK3 1445 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 KIAA0586Q9BVV6 1533 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 XBP1P17861 261 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 CEBPAP49715 358 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-207ENST00000426142 MCM10Q7L590 875 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 WDR97A6NE52 1622 aa9.51□□□□□ -0.89
CTNND1-207ENST00000426142 FKBP4Q02790 459 aaKnown RBP eCLIP9.5□□□□□ -0.89
CTNND1-207ENST00000426142 PNISRQ8TF01 805 aaKnown RBP9.5□□□□□ -0.89
CTNND1-207ENST00000426142 DCTN1Q14203 1278 aa9.5□□□□□ -0.89
CTNND1-207ENST00000426142 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-207ENST00000426142 GCC1Q96CN9 775 aa9.5□□□□□ -0.89
CTNND1-207ENST00000426142 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-207ENST00000426142 NAP1L1P55209 391 aaKnown RBP9.5□□□□□ -0.89
CTNND1-207ENST00000426142 CCDC57Q2TAC2 916 aa9.5□□□□□ -0.89
CTNND1-207ENST00000426142 MPHOSPH8Q99549 860 aa9.5□□□□□ -0.89
CTNND1-207ENST00000426142 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
CTNND1-207ENST00000426142 CAMSAP2Q08AD1 1489 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms