RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 GJD4Q96KN9 370 aaPredicted RBP30.88■■■□□ 2.53
CDCP1-202ENST00000425231 ACEP12821 1306 aa30.87■■■□□ 2.53
CDCP1-202ENST00000425231 FAM83GA6ND36 823 aa30.85■■■□□ 2.53
CDCP1-202ENST00000425231 SRPK2P78362 688 aaKnown RBP30.85■■■□□ 2.53
CDCP1-202ENST00000425231 CABP2Q9NPB3 220 aa30.85■■■□□ 2.53
CDCP1-202ENST00000425231 PLCH1Q4KWH8 1693 aa30.83■■■□□ 2.53
CDCP1-202ENST00000425231 CRYBG1Q9Y4K1 1723 aa30.82■■■□□ 2.53
CDCP1-202ENST00000425231 NWD2Q9ULI1 1742 aa30.81■■■□□ 2.52
CDCP1-202ENST00000425231 RALGAPBQ86X10 1494 aa30.8■■■□□ 2.52
CDCP1-202ENST00000425231 PPIP5K1Q6PFW1 1433 aa30.8■■■□□ 2.52
CDCP1-202ENST00000425231 GLI3P10071 1580 aa30.79■■■□□ 2.52
CDCP1-202ENST00000425231 TONSLQ96HA7 1378 aa30.78■■■□□ 2.52
CDCP1-202ENST00000425231 VPS72Q15906 364 aa30.77■■■□□ 2.52
CDCP1-202ENST00000425231 EVC2Q86UK5 1308 aa30.75■■■□□ 2.51
CDCP1-202ENST00000425231 CABP1Q9NZU7 370 aa30.73■■■□□ 2.51
CDCP1-202ENST00000425231 COL14A1Q05707 1796 aaKnown RBP30.73■■■□□ 2.51
CDCP1-202ENST00000425231 NUTM2GQ5VZR2 741 aa30.73■■■□□ 2.51
CDCP1-202ENST00000425231 BTG4Q9NY30 223 aa30.73■■■□□ 2.51
CDCP1-202ENST00000425231 ATAD2Q6PL18 1390 aa30.72■■■□□ 2.51
CDCP1-202ENST00000425231 NRAPQ86VF7 1730 aa30.71■■■□□ 2.51
CDCP1-202ENST00000425231 PHRF1Q9P1Y6 1649 aaKnown RBP30.7■■■□□ 2.51
CDCP1-202ENST00000425231 ABTB2Q8N961 1025 aa30.7■■■□□ 2.5
CDCP1-202ENST00000425231 CARD11Q9BXL7 1154 aa30.7■■■□□ 2.5
CDCP1-202ENST00000425231 EP400Q96L91 3159 aa30.68■■■□□ 2.5
CDCP1-202ENST00000425231 ONECUT3O60422 494 aaPredicted RBP30.68■■■□□ 2.5
CDCP1-202ENST00000425231 PRDM11Q9NQV5 511 aa30.67■■■□□ 2.5
CDCP1-202ENST00000425231 CCDC9Q9Y3X0 531 aaKnown RBP30.67■■■□□ 2.5
CDCP1-202ENST00000425231 BRD4O60885 1362 aaPredicted RBP30.66■■■□□ 2.5
CDCP1-202ENST00000425231 KIAA0232Q92628 1395 aa30.66■■■□□ 2.5
CDCP1-202ENST00000425231 USP6P35125 1406 aa30.65■■■□□ 2.5
CDCP1-202ENST00000425231 SBNO2Q9Y2G9 1366 aa30.65■■■□□ 2.5
CDCP1-202ENST00000425231 ZC3H6P61129 1189 aaKnown RBP30.64■■■□□ 2.49
CDCP1-202ENST00000425231 SEPT12Q8IYM1 358 aa30.64■■■□□ 2.49
CDCP1-202ENST00000425231 USP19O94966 1318 aa30.63■■■□□ 2.49
CDCP1-202ENST00000425231 CHRNA2Q15822 529 aa30.62■■■□□ 2.49
CDCP1-202ENST00000425231 NLRP13Q86W25 1043 aa30.62■■■□□ 2.49
CDCP1-202ENST00000425231 BRWD3Q6RI45 1802 aa30.62■■■□□ 2.49
CDCP1-202ENST00000425231 SSH2Q76I76 1423 aa30.61■■■□□ 2.49
CDCP1-202ENST00000425231 NRKQ7Z2Y5 1582 aa30.6■■■□□ 2.49
CDCP1-202ENST00000425231 SPATA31A5Q5VU36 1347 aa30.57■■■□□ 2.48
CDCP1-202ENST00000425231 SPATA31A7Q8IWB4 1347 aa30.57■■■□□ 2.48
CDCP1-202ENST00000425231 ZNF692Q9BU19 519 aaPredicted RBP30.57■■■□□ 2.48
CDCP1-202ENST00000425231 GCP02774 474 aa30.56■■■□□ 2.48
CDCP1-202ENST00000425231 CPDO75976 1380 aa30.56■■■□□ 2.48
CDCP1-202ENST00000425231 FAM98CQ17RN3 349 aaKnown RBP30.56■■■□□ 2.48
CDCP1-202ENST00000425231 CPSF1Q10570 1443 aaKnown RBP30.54■■■□□ 2.48
CDCP1-202ENST00000425231 AKAP12Q02952 1782 aa30.54■■■□□ 2.48
CDCP1-202ENST00000425231 NLRP6P59044 892 aa30.54■■■□□ 2.48
CDCP1-202ENST00000425231 CCDC125Q86Z20 511 aa30.53■■■□□ 2.48
CDCP1-202ENST00000425231 PIK3C2AO00443 1686 aa30.51■■■□□ 2.47
CDCP1-202ENST00000425231 KRT27Q7Z3Y8 459 aa30.51■■■□□ 2.47
CDCP1-202ENST00000425231 STRN4Q9NRL3 753 aa30.51■■■□□ 2.47
CDCP1-202ENST00000425231 CAMTA1Q9Y6Y1 1673 aa30.51■■■□□ 2.47
CDCP1-202ENST00000425231 TTC21BQ7Z4L5 1316 aa30.5■■■□□ 2.47
CDCP1-202ENST00000425231 LMO7Q8WWI1 1683 aa30.5■■■□□ 2.47
CDCP1-202ENST00000425231 SPATA31A1Q5TZJ5 1347 aa30.5■■■□□ 2.47
CDCP1-202ENST00000425231 SLIT3O75094 1523 aa30.49■■■□□ 2.47
CDCP1-202ENST00000425231 A0A0G2JS52 829 aa30.48■■■□□ 2.47
CDCP1-202ENST00000425231 MYT1Q01538 1121 aa30.48■■■□□ 2.47
CDCP1-202ENST00000425231 TESK2Q96S53 571 aa30.47■■■□□ 2.47
CDCP1-202ENST00000425231 KTN1Q86UP2 1357 aaKnown RBP30.47■■■□□ 2.47
CDCP1-202ENST00000425231 ST20-MTHFSA0A0A6YYL1 179 aa30.46■■■□□ 2.47
CDCP1-202ENST00000425231 EVA1CP58658 441 aa30.46■■■□□ 2.47
CDCP1-202ENST00000425231 TTC21AQ8NDW8 1320 aa30.45■■■□□ 2.47
CDCP1-202ENST00000425231 PUS7Q96PZ0 661 aaKnown RBP30.45■■■□□ 2.46
CDCP1-202ENST00000425231 THSD7AQ9UPZ6 1657 aa30.44■■■□□ 2.46
CDCP1-202ENST00000425231 CD163L1Q9NR16 1453 aa30.44■■■□□ 2.46
CDCP1-202ENST00000425231 PCGF6Q9BYE7 350 aa30.44■■■□□ 2.46
CDCP1-202ENST00000425231 BLMP54132 1417 aaPredicted RBP30.44■■■□□ 2.46
CDCP1-202ENST00000425231 MON2Q7Z3U7 1717 aa30.43■■■□□ 2.46
CDCP1-202ENST00000425231 LARP1Q6PKG0 1096 aaKnown RBP30.42■■■□□ 2.46
CDCP1-202ENST00000425231 SLC12A5Q9H2X9 1139 aa30.42■■■□□ 2.46
CDCP1-202ENST00000425231 TMC1Q8TDI8 760 aa30.41■■■□□ 2.46
CDCP1-202ENST00000425231 CLSPNQ9HAW4 1339 aa30.41■■■□□ 2.46
CDCP1-202ENST00000425231 AATKQ6ZMQ8 1374 aa30.4■■■□□ 2.46
CDCP1-202ENST00000425231 USP35Q9P2H5 1018 aa30.39■■■□□ 2.46
CDCP1-202ENST00000425231 TIMELESSQ9UNS1 1208 aa30.39■■■□□ 2.46
CDCP1-202ENST00000425231 COL5A2P05997 1499 aaPredicted RBP30.39■■■□□ 2.46
CDCP1-202ENST00000425231 BARGINQ6ZT62 677 aa30.38■■■□□ 2.45
CDCP1-202ENST00000425231 COL18A1P39060 1754 aa30.37■■■□□ 2.45
CDCP1-202ENST00000425231 ZBTB7CA1YPR0 619 aa30.37■■■□□ 2.45
CDCP1-202ENST00000425231 KCNH5Q8NCM2 988 aa30.37■■■□□ 2.45
CDCP1-202ENST00000425231 SLC24A1O60721 1099 aa30.36■■■□□ 2.45
CDCP1-202ENST00000425231 ARHGEF25Q86VW2 580 aa30.36■■■□□ 2.45
CDCP1-202ENST00000425231 FAM182BQ5T319 152 aa30.35■■■□□ 2.45
CDCP1-202ENST00000425231 HDGFL2Q7Z4V5 671 aaPredicted RBP30.35■■■□□ 2.45
CDCP1-202ENST00000425231 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.35■■■□□ 2.45
CDCP1-202ENST00000425231 TCP11L2Q8N4U5 519 aa30.34■■■□□ 2.45
CDCP1-202ENST00000425231 ZRANB1Q9UGI0 708 aa30.34■■■□□ 2.45
CDCP1-202ENST00000425231 USP31Q70CQ4 1352 aa30.33■■■□□ 2.45
CDCP1-202ENST00000425231 AXIN2Q9Y2T1 843 aa30.33■■■□□ 2.45
CDCP1-202ENST00000425231 USP47Q96K76 1375 aa30.32■■■□□ 2.44
CDCP1-202ENST00000425231 DEFB132Q7Z7B7 95 aa30.32■■■□□ 2.44
CDCP1-202ENST00000425231 TERF2IPQ9NYB0 399 aa30.32■■■□□ 2.44
CDCP1-202ENST00000425231 A0A1W2PP64 1363 aa30.32■■■□□ 2.44
CDCP1-202ENST00000425231 SF3B2Q13435 895 aaKnown RBP30.31■■■□□ 2.44
CDCP1-202ENST00000425231 NME9Q86XW9 330 aa30.31■■■□□ 2.44
CDCP1-202ENST00000425231 THRAP3Q9Y2W1 955 aaKnown RBP30.31■■■□□ 2.44
CDCP1-202ENST00000425231 SOX12O15370 315 aa30.3■■■□□ 2.44
CDCP1-202ENST00000425231 NFAT5O94916 1531 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms