RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CABP1Q9NZU7 370 aa31.54■■■□□ 2.64
PTCHD3P2-201ENST00000424937 ATAD2Q6PL18 1390 aa31.54■■■□□ 2.64
PTCHD3P2-201ENST00000424937 USP47Q96K76 1375 aa31.54■■■□□ 2.64
PTCHD3P2-201ENST00000424937 PHRF1Q9P1Y6 1649 aaKnown RBP31.53■■■□□ 2.64
PTCHD3P2-201ENST00000424937 ST20-MTHFSA0A0A6YYL1 179 aa31.52■■■□□ 2.64
PTCHD3P2-201ENST00000424937 PLCH1Q4KWH8 1693 aa31.51■■■□□ 2.64
PTCHD3P2-201ENST00000424937 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.49■■■□□ 2.63
PTCHD3P2-201ENST00000424937 USP6P35125 1406 aa31.49■■■□□ 2.63
PTCHD3P2-201ENST00000424937 MON2Q7Z3U7 1717 aa31.47■■■□□ 2.63
PTCHD3P2-201ENST00000424937 SOCS7O14512 581 aa31.46■■■□□ 2.63
PTCHD3P2-201ENST00000424937 TESK2Q96S53 571 aa31.46■■■□□ 2.63
PTCHD3P2-201ENST00000424937 USP21Q9UK80 565 aa31.46■■■□□ 2.63
PTCHD3P2-201ENST00000424937 NRKQ7Z2Y5 1582 aa31.45■■■□□ 2.63
PTCHD3P2-201ENST00000424937 FNBP4Q8N3X1 1017 aaPredicted RBP31.45■■■□□ 2.63
PTCHD3P2-201ENST00000424937 NWD2Q9ULI1 1742 aa31.45■■■□□ 2.63
PTCHD3P2-201ENST00000424937 BRD4O60885 1362 aaPredicted RBP31.43■■■□□ 2.62
PTCHD3P2-201ENST00000424937 NUTM2GQ5VZR2 741 aa31.42■■■□□ 2.62
PTCHD3P2-201ENST00000424937 PIK3C2AO00443 1686 aa31.41■■■□□ 2.62
PTCHD3P2-201ENST00000424937 SLIT2O94813 1529 aa31.41■■■□□ 2.62
PTCHD3P2-201ENST00000424937 QTRT2Q9H974 415 aaKnown RBP31.41■■■□□ 2.62
PTCHD3P2-201ENST00000424937 COL14A1Q05707 1796 aaKnown RBP31.4■■■□□ 2.62
PTCHD3P2-201ENST00000424937 BCL9LQ86UU0 1499 aa31.4■■■□□ 2.62
PTCHD3P2-201ENST00000424937 RXRBP28702 533 aa31.4■■■□□ 2.62
PTCHD3P2-201ENST00000424937 ABTB2Q8N961 1025 aa31.4■■■□□ 2.62
PTCHD3P2-201ENST00000424937 ATRNO75882 1429 aa31.38■■■□□ 2.61
PTCHD3P2-201ENST00000424937 CPSF1Q10570 1443 aaKnown RBP31.38■■■□□ 2.61
PTCHD3P2-201ENST00000424937 SLC24A1O60721 1099 aa31.37■■■□□ 2.61
PTCHD3P2-201ENST00000424937 TMC1Q8TDI8 760 aa31.37■■■□□ 2.61
PTCHD3P2-201ENST00000424937 TRPC5Q9UL62 973 aaPredicted RBP31.37■■■□□ 2.61
PTCHD3P2-201ENST00000424937 SSH2Q76I76 1423 aa31.37■■■□□ 2.61
PTCHD3P2-201ENST00000424937 NRAPQ86VF7 1730 aa31.36■■■□□ 2.61
PTCHD3P2-201ENST00000424937 CD163L1Q9NR16 1453 aa31.35■■■□□ 2.61
PTCHD3P2-201ENST00000424937 KTN1Q86UP2 1357 aaKnown RBP31.35■■■□□ 2.61
PTCHD3P2-201ENST00000424937 ZNF692Q9BU19 519 aaPredicted RBP31.35■■■□□ 2.61
PTCHD3P2-201ENST00000424937 CDK12Q9NYV4 1490 aaPredicted RBP31.34■■■□□ 2.61
PTCHD3P2-201ENST00000424937 PUS7Q96PZ0 661 aaKnown RBP31.34■■■□□ 2.61
PTCHD3P2-201ENST00000424937 RBM6P78332 1123 aaKnown RBP31.33■■■□□ 2.61
PTCHD3P2-201ENST00000424937 TMF1P82094 1093 aa31.33■■■□□ 2.61
PTCHD3P2-201ENST00000424937 USP19O94966 1318 aa31.32■■■□□ 2.6
PTCHD3P2-201ENST00000424937 FAM83GA6ND36 823 aa31.31■■■□□ 2.6
PTCHD3P2-201ENST00000424937 NLRP13Q86W25 1043 aa31.31■■■□□ 2.6
PTCHD3P2-201ENST00000424937 UNC5CLQ8IV45 518 aa31.31■■■□□ 2.6
PTCHD3P2-201ENST00000424937 SLC12A5Q9H2X9 1139 aa31.31■■■□□ 2.6
PTCHD3P2-201ENST00000424937 TTC21BQ7Z4L5 1316 aa31.3■■■□□ 2.6
PTCHD3P2-201ENST00000424937 RGS12O14924 1447 aa31.3■■■□□ 2.6
PTCHD3P2-201ENST00000424937 KIAA0232Q92628 1395 aa31.3■■■□□ 2.6
PTCHD3P2-201ENST00000424937 PRDM11Q9NQV5 511 aa31.29■■■□□ 2.6
PTCHD3P2-201ENST00000424937 NINLQ9Y2I6 1382 aa31.29■■■□□ 2.6
PTCHD3P2-201ENST00000424937 SLIT3O75094 1523 aa31.28■■■□□ 2.6
PTCHD3P2-201ENST00000424937 TTC21AQ8NDW8 1320 aa31.27■■■□□ 2.6
PTCHD3P2-201ENST00000424937 GLI3P10071 1580 aa31.27■■■□□ 2.6
PTCHD3P2-201ENST00000424937 NLRP6P59044 892 aa31.27■■■□□ 2.6
PTCHD3P2-201ENST00000424937 HDGFL2Q7Z4V5 671 aaPredicted RBP31.27■■■□□ 2.6
PTCHD3P2-201ENST00000424937 A0A1W2PP64 1363 aa31.27■■■□□ 2.6
PTCHD3P2-201ENST00000424937 ZC3H6P61129 1189 aaKnown RBP31.25■■■□□ 2.59
PTCHD3P2-201ENST00000424937 TERF2IPQ9NYB0 399 aa31.25■■■□□ 2.59
PTCHD3P2-201ENST00000424937 MYOM1P52179 1685 aa31.25■■■□□ 2.59
PTCHD3P2-201ENST00000424937 USP54Q70EL1 1684 aa31.25■■■□□ 2.59
PTCHD3P2-201ENST00000424937 BTG4Q9NY30 223 aa31.24■■■□□ 2.59
PTCHD3P2-201ENST00000424937 EDC4Q6P2E9 1401 aaKnown RBP31.23■■■□□ 2.59
PTCHD3P2-201ENST00000424937 CHRNA2Q15822 529 aa31.22■■■□□ 2.59
PTCHD3P2-201ENST00000424937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.22■■■□□ 2.59
PTCHD3P2-201ENST00000424937 GJD4Q96KN9 370 aaPredicted RBP31.22■■■□□ 2.59
PTCHD3P2-201ENST00000424937 LMO7Q8WWI1 1683 aa31.22■■■□□ 2.59
PTCHD3P2-201ENST00000424937 GCP02774 474 aa31.21■■■□□ 2.59
PTCHD3P2-201ENST00000424937 EIF4G2P78344 907 aaKnown RBP eCLIP31.21■■■□□ 2.59
PTCHD3P2-201ENST00000424937 CDCA8Q53HL2 280 aa31.21■■■□□ 2.59
PTCHD3P2-201ENST00000424937 CPDO75976 1380 aa31.2■■■□□ 2.59
PTCHD3P2-201ENST00000424937 VPS72Q15906 364 aa31.19■■■□□ 2.58
PTCHD3P2-201ENST00000424937 CCDC9Q9Y3X0 531 aaKnown RBP31.19■■■□□ 2.58
PTCHD3P2-201ENST00000424937 HSPA5P11021 654 aaKnown RBP31.17■■■□□ 2.58
PTCHD3P2-201ENST00000424937 ANKRD36BQ8N2N9 1353 aa31.17■■■□□ 2.58
PTCHD3P2-201ENST00000424937 NME9Q86XW9 330 aa31.15■■■□□ 2.58
PTCHD3P2-201ENST00000424937 BRWD3Q6RI45 1802 aa31.14■■■□□ 2.58
PTCHD3P2-201ENST00000424937 NFAT5O94916 1531 aa31.14■■■□□ 2.57
PTCHD3P2-201ENST00000424937 CAMTA1Q9Y6Y1 1673 aa31.13■■■□□ 2.57
PTCHD3P2-201ENST00000424937 ZBTB7CA1YPR0 619 aa31.13■■■□□ 2.57
PTCHD3P2-201ENST00000424937 ZRANB1Q9UGI0 708 aa31.13■■■□□ 2.57
PTCHD3P2-201ENST00000424937 SOX12O15370 315 aa31.12■■■□□ 2.57
PTCHD3P2-201ENST00000424937 USP31Q70CQ4 1352 aa31.12■■■□□ 2.57
PTCHD3P2-201ENST00000424937 LTN1O94822 1766 aa31.12■■■□□ 2.57
PTCHD3P2-201ENST00000424937 COL18A1P39060 1754 aa31.12■■■□□ 2.57
PTCHD3P2-201ENST00000424937 RGPD5Q99666 1765 aa31.12■■■□□ 2.57
PTCHD3P2-201ENST00000424937 KIF20BQ96Q89 1820 aa31.12■■■□□ 2.57
PTCHD3P2-201ENST00000424937 KCNH5Q8NCM2 988 aa31.1■■■□□ 2.57
PTCHD3P2-201ENST00000424937 STRN4Q9NRL3 753 aa31.1■■■□□ 2.57
PTCHD3P2-201ENST00000424937 OVOS2A0A0J9YW53 1432 aa31.07■■■□□ 2.57
PTCHD3P2-201ENST00000424937 OVOS2Q6IE36 1432 aa31.07■■■□□ 2.57
PTCHD3P2-201ENST00000424937 POLR3GLQ9BT43 218 aa31.07■■■□□ 2.56
PTCHD3P2-201ENST00000424937 COL5A2P05997 1499 aaPredicted RBP31.06■■■□□ 2.56
PTCHD3P2-201ENST00000424937 SPATA31A5Q5VU36 1347 aa31.05■■■□□ 2.56
PTCHD3P2-201ENST00000424937 SPATA31A7Q8IWB4 1347 aa31.05■■■□□ 2.56
PTCHD3P2-201ENST00000424937 AATKQ6ZMQ8 1374 aa31.05■■■□□ 2.56
PTCHD3P2-201ENST00000424937 EVA1CP58658 441 aa31.04■■■□□ 2.56
PTCHD3P2-201ENST00000424937 THSD7AQ9UPZ6 1657 aa31.01■■■□□ 2.55
PTCHD3P2-201ENST00000424937 A0A0G2JS52 829 aa31.01■■■□□ 2.55
PTCHD3P2-201ENST00000424937 MYT1Q01538 1121 aa31.01■■■□□ 2.55
PTCHD3P2-201ENST00000424937 FAM98CQ17RN3 349 aaKnown RBP31.01■■■□□ 2.55
PTCHD3P2-201ENST00000424937 ARHGEF25Q86VW2 580 aa31.01■■■□□ 2.55
PTCHD3P2-201ENST00000424937 ABCC6O95255 1503 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms