RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 TRPM1Q7Z4N2 1603 aa22.96■■□□□ 1.27
SNHG17-205ENST00000424235 A0A0G2JS52 829 aa22.95■■□□□ 1.26
SNHG17-205ENST00000424235 GLI3P10071 1580 aa22.95■■□□□ 1.26
SNHG17-205ENST00000424235 MYT1Q01538 1121 aa22.95■■□□□ 1.26
SNHG17-205ENST00000424235 NUTM2GQ5VZR2 741 aa22.95■■□□□ 1.26
SNHG17-205ENST00000424235 TRPM3Q9HCF6 1732 aaPredicted RBP22.94■■□□□ 1.26
SNHG17-205ENST00000424235 GJD4Q96KN9 370 aaPredicted RBP22.94■■□□□ 1.26
SNHG17-205ENST00000424235 PPIP5K1Q6PFW1 1433 aa22.93■■□□□ 1.26
SNHG17-205ENST00000424235 EVC2Q86UK5 1308 aa22.93■■□□□ 1.26
SNHG17-205ENST00000424235 BRWD3Q6RI45 1802 aa22.93■■□□□ 1.26
SNHG17-205ENST00000424235 ABCA3Q99758 1704 aa22.92■■□□□ 1.26
SNHG17-205ENST00000424235 SLIT2O94813 1529 aa22.92■■□□□ 1.26
SNHG17-205ENST00000424235 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
SNHG17-205ENST00000424235 NBPF8Q3BBV2 869 aa22.91■■□□□ 1.26
SNHG17-205ENST00000424235 CCDC125Q86Z20 511 aa22.91■■□□□ 1.26
SNHG17-205ENST00000424235 CARD11Q9BXL7 1154 aa22.91■■□□□ 1.26
SNHG17-205ENST00000424235 PRDM11Q9NQV5 511 aa22.91■■□□□ 1.26
SNHG17-205ENST00000424235 TOPAZ1Q8N9V7 1692 aa22.9■■□□□ 1.26
SNHG17-205ENST00000424235 ALS2Q96Q42 1657 aa22.9■■□□□ 1.26
SNHG17-205ENST00000424235 ABTB2Q8N961 1025 aa22.89■■□□□ 1.25
SNHG17-205ENST00000424235 BTG4Q9NY30 223 aa22.89■■□□□ 1.25
SNHG17-205ENST00000424235 PLCH1Q4KWH8 1693 aa22.89■■□□□ 1.25
SNHG17-205ENST00000424235 PLEKHG3A1L390 1219 aa22.88■■□□□ 1.25
SNHG17-205ENST00000424235 FAM83GA6ND36 823 aa22.88■■□□□ 1.25
SNHG17-205ENST00000424235 POLR3AO14802 1390 aaPredicted RBP22.88■■□□□ 1.25
SNHG17-205ENST00000424235 CABP1Q9NZU7 370 aa22.87■■□□□ 1.25
SNHG17-205ENST00000424235 BLMP54132 1417 aaPredicted RBP22.86■■□□□ 1.25
SNHG17-205ENST00000424235 VPS72Q15906 364 aa22.86■■□□□ 1.25
SNHG17-205ENST00000424235 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
SNHG17-205ENST00000424235 ZC3H6P61129 1189 aaKnown RBP22.84■■□□□ 1.25
SNHG17-205ENST00000424235 NWD2Q9ULI1 1742 aa22.83■■□□□ 1.25
SNHG17-205ENST00000424235 CHRNA2Q15822 529 aa22.83■■□□□ 1.25
SNHG17-205ENST00000424235 DEFB132Q7Z7B7 95 aa22.83■■□□□ 1.25
SNHG17-205ENST00000424235 PCGF6Q9BYE7 350 aa22.83■■□□□ 1.25
SNHG17-205ENST00000424235 COL14A1Q05707 1796 aaKnown RBP22.82■■□□□ 1.24
SNHG17-205ENST00000424235 KIAA0232Q92628 1395 aa22.82■■□□□ 1.24
SNHG17-205ENST00000424235 STRN4Q9NRL3 753 aa22.82■■□□□ 1.24
SNHG17-205ENST00000424235 NLRP13Q86W25 1043 aa22.81■■□□□ 1.24
SNHG17-205ENST00000424235 SEPT12Q8IYM1 358 aa22.8■■□□□ 1.24
SNHG17-205ENST00000424235 EVA1CP58658 441 aa22.78■■□□□ 1.24
SNHG17-205ENST00000424235 FAM98CQ17RN3 349 aaKnown RBP22.78■■□□□ 1.24
SNHG17-205ENST00000424235 PHRF1Q9P1Y6 1649 aaKnown RBP22.78■■□□□ 1.24
SNHG17-205ENST00000424235 USP6P35125 1406 aa22.77■■□□□ 1.24
SNHG17-205ENST00000424235 NLRP6P59044 892 aa22.77■■□□□ 1.24
SNHG17-205ENST00000424235 TMC1Q8TDI8 760 aa22.77■■□□□ 1.24
SNHG17-205ENST00000424235 LRP5O75197 1615 aa22.75■■□□□ 1.23
SNHG17-205ENST00000424235 CRYBG1Q9Y4K1 1723 aa22.75■■□□□ 1.23
SNHG17-205ENST00000424235 SF3B2Q13435 895 aaKnown RBP22.74■■□□□ 1.23
SNHG17-205ENST00000424235 USP35Q9P2H5 1018 aa22.74■■□□□ 1.23
SNHG17-205ENST00000424235 BRD4O60885 1362 aaPredicted RBP22.74■■□□□ 1.23
SNHG17-205ENST00000424235 NRAPQ86VF7 1730 aa22.74■■□□□ 1.23
SNHG17-205ENST00000424235 SOX12O15370 315 aa22.73■■□□□ 1.23
SNHG17-205ENST00000424235 KRT27Q7Z3Y8 459 aa22.73■■□□□ 1.23
SNHG17-205ENST00000424235 ZNF692Q9BU19 519 aaPredicted RBP22.72■■□□□ 1.23
SNHG17-205ENST00000424235 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
SNHG17-205ENST00000424235 GCP02774 474 aa22.71■■□□□ 1.23
SNHG17-205ENST00000424235 USP19O94966 1318 aa22.71■■□□□ 1.23
SNHG17-205ENST00000424235 KTN1Q86UP2 1357 aaKnown RBP22.71■■□□□ 1.23
SNHG17-205ENST00000424235 SPATA31A5Q5VU36 1347 aa22.7■■□□□ 1.22
SNHG17-205ENST00000424235 SPATA31A7Q8IWB4 1347 aa22.7■■□□□ 1.22
SNHG17-205ENST00000424235 SBNO2Q9Y2G9 1366 aa22.69■■□□□ 1.22
SNHG17-205ENST00000424235 ONECUT3O60422 494 aaPredicted RBP22.69■■□□□ 1.22
SNHG17-205ENST00000424235 HDGFL2Q7Z4V5 671 aaPredicted RBP22.68■■□□□ 1.22
SNHG17-205ENST00000424235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.68■■□□□ 1.227e-6■■□□□ 11.5
SNHG17-205ENST00000424235 TTC21BQ7Z4L5 1316 aa22.67■■□□□ 1.22
SNHG17-205ENST00000424235 PSDA5PKW4 1024 aaPredicted RBP22.66■■□□□ 1.22
SNHG17-205ENST00000424235 CPDO75976 1380 aa22.65■■□□□ 1.22
SNHG17-205ENST00000424235 TTC21AQ8NDW8 1320 aa22.65■■□□□ 1.22
SNHG17-205ENST00000424235 ST20-MTHFSA0A0A6YYL1 179 aa22.65■■□□□ 1.22
SNHG17-205ENST00000424235 SSH2Q76I76 1423 aa22.65■■□□□ 1.22
SNHG17-205ENST00000424235 SPATA31A1Q5TZJ5 1347 aa22.64■■□□□ 1.22
SNHG17-205ENST00000424235 LARP1Q6PKG0 1096 aaKnown RBP22.63■■□□□ 1.21
SNHG17-205ENST00000424235 CCER1Q8TC90 406 aaPredicted RBP22.63■■□□□ 1.21
SNHG17-205ENST00000424235 TERF2IPQ9NYB0 399 aa22.63■■□□□ 1.21
SNHG17-205ENST00000424235 PIK3C2AO00443 1686 aa22.62■■□□□ 1.21
SNHG17-205ENST00000424235 KCNH5Q8NCM2 988 aa22.62■■□□□ 1.21
SNHG17-205ENST00000424235 AKAP12Q02952 1782 aa22.61■■□□□ 1.21
SNHG17-205ENST00000424235 RGPD1P0DJD0 1748 aa22.61■■□□□ 1.21
SNHG17-205ENST00000424235 BAG6P46379 1132 aa22.61■■□□□ 1.21
SNHG17-205ENST00000424235 FAM182BQ5T319 152 aa22.61■■□□□ 1.21
SNHG17-205ENST00000424235 SLC12A5Q9H2X9 1139 aa22.61■■□□□ 1.21
SNHG17-205ENST00000424235 CSB-PGBD3P0DP91 1061 aa22.6■■□□□ 1.21
SNHG17-205ENST00000424235 CAMTA1Q9Y6Y1 1673 aa22.6■■□□□ 1.21
SNHG17-205ENST00000424235 USP47Q96K76 1375 aa22.6■■□□□ 1.21
SNHG17-205ENST00000424235 CPSF1Q10570 1443 aaKnown RBP22.59■■□□□ 1.21
SNHG17-205ENST00000424235 SLIT3O75094 1523 aa22.59■■□□□ 1.21
SNHG17-205ENST00000424235 SLC24A1O60721 1099 aa22.59■■□□□ 1.21
SNHG17-205ENST00000424235 PDE3BQ13370 1112 aa22.59■■□□□ 1.21
SNHG17-205ENST00000424235 TCP11L2Q8N4U5 519 aa22.59■■□□□ 1.21
SNHG17-205ENST00000424235 TOM1L2Q6ZVM7 507 aa22.58■■□□□ 1.21
SNHG17-205ENST00000424235 TNS1Q9HBL0 1735 aaKnown RBP22.57■■□□□ 1.2
SNHG17-205ENST00000424235 TMF1P82094 1093 aa22.57■■□□□ 1.2
SNHG17-205ENST00000424235 NME9Q86XW9 330 aa22.57■■□□□ 1.2
SNHG17-205ENST00000424235 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
SNHG17-205ENST00000424235 COL5A2P05997 1499 aaPredicted RBP22.56■■□□□ 1.2
SNHG17-205ENST00000424235 AATKQ6ZMQ8 1374 aa22.56■■□□□ 1.2
SNHG17-205ENST00000424235 EN1Q05925 392 aaPredicted RBP22.56■■□□□ 1.2
SNHG17-205ENST00000424235 LMO7Q8WWI1 1683 aa22.55■■□□□ 1.2
SNHG17-205ENST00000424235 THSD7AQ9UPZ6 1657 aa22.55■■□□□ 1.2
SNHG17-205ENST00000424235 MON2Q7Z3U7 1717 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms