RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 ARHGEF10O15013 1369 aa30.22■■■□□ 2.43
SEC22C-207ENST00000423701 LMOD2Q6P5Q4 547 aa30.2■■■□□ 2.43
SEC22C-207ENST00000423701 SSH2Q76I76 1423 aa30.2■■■□□ 2.43
SEC22C-207ENST00000423701 BRD4O60885 1362 aaPredicted RBP30.19■■■□□ 2.42
SEC22C-207ENST00000423701 ZNF692Q9BU19 519 aaPredicted RBP30.19■■■□□ 2.42
SEC22C-207ENST00000423701 A0A1W2PP64 1363 aa30.19■■■□□ 2.42
SEC22C-207ENST00000423701 KTN1Q86UP2 1357 aaKnown RBP30.19■■■□□ 2.42
SEC22C-207ENST00000423701 C11orf95C9JLR9 678 aaPredicted RBP30.17■■■□□ 2.42
SEC22C-207ENST00000423701 ABCA3Q99758 1704 aa30.16■■■□□ 2.42
SEC22C-207ENST00000423701 NUTM2BA6NNL0 878 aaPredicted RBP30.16■■■□□ 2.42
SEC22C-207ENST00000423701 NUTM2EB1AL46 878 aaPredicted RBP30.16■■■□□ 2.42
SEC22C-207ENST00000423701 HDGFL2Q7Z4V5 671 aaPredicted RBP30.16■■■□□ 2.42
SEC22C-207ENST00000423701 NUTM2AQ8IVF1 878 aaPredicted RBP30.16■■■□□ 2.42
SEC22C-207ENST00000423701 TERF2IPQ9NYB0 399 aa30.16■■■□□ 2.42
SEC22C-207ENST00000423701 ANKRD36BQ8N2N9 1353 aa30.15■■■□□ 2.42
SEC22C-207ENST00000423701 POLR3GLQ9BT43 218 aa30.14■■■□□ 2.42
SEC22C-207ENST00000423701 CRYBG1Q9Y4K1 1723 aa30.14■■■□□ 2.42
SEC22C-207ENST00000423701 PIK3C2AO00443 1686 aa30.13■■■□□ 2.41
SEC22C-207ENST00000423701 TTC21BQ7Z4L5 1316 aa30.11■■■□□ 2.41
SEC22C-207ENST00000423701 EDC4Q6P2E9 1401 aaKnown RBP30.11■■■□□ 2.41
SEC22C-207ENST00000423701 PLEKHG5O94827 1062 aa30.1■■■□□ 2.41
SEC22C-207ENST00000423701 ABTB2Q8N961 1025 aa30.1■■■□□ 2.41
SEC22C-207ENST00000423701 CABLES1Q8TDN4 633 aa30.1■■■□□ 2.41
SEC22C-207ENST00000423701 KIF7Q2M1P5 1343 aa30.09■■■□□ 2.41
SEC22C-207ENST00000423701 NUTM2GQ5VZR2 741 aa30.09■■■□□ 2.41
SEC22C-207ENST00000423701 TTC21AQ8NDW8 1320 aa30.09■■■□□ 2.41
SEC22C-207ENST00000423701 PHRF1Q9P1Y6 1649 aaKnown RBP30.08■■■□□ 2.41
SEC22C-207ENST00000423701 MARF1Q9Y4F3 1742 aaKnown RBP30.07■■■□□ 2.4
SEC22C-207ENST00000423701 MEX3CQ5U5Q3 659 aaKnown RBP30.06■■■□□ 2.4
SEC22C-207ENST00000423701 ADAMTS2O95450 1211 aa30.05■■■□□ 2.4
SEC22C-207ENST00000423701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.05■■■□□ 2.4
SEC22C-207ENST00000423701 HAP1P54257 671 aaPredicted RBP30.03■■■□□ 2.4
SEC22C-207ENST00000423701 USP19O94966 1318 aa30.03■■■□□ 2.4
SEC22C-207ENST00000423701 CCDC7Q96M83 1385 aa30.02■■■□□ 2.4
SEC22C-207ENST00000423701 NLRP13Q86W25 1043 aa30.01■■■□□ 2.4
SEC22C-207ENST00000423701 USP54Q70EL1 1684 aa30■■■□□ 2.39
SEC22C-207ENST00000423701 NLRP6P59044 892 aa30■■■□□ 2.39
SEC22C-207ENST00000423701 WASHC2AQ641Q2 1341 aa30■■■□□ 2.39
SEC22C-207ENST00000423701 NME9Q86XW9 330 aa29.99■■■□□ 2.39
SEC22C-207ENST00000423701 SLIT3O75094 1523 aa29.99■■■□□ 2.39
SEC22C-207ENST00000423701 C8orf37Q96NL8 207 aa29.99■■■□□ 2.39
SEC22C-207ENST00000423701 CARD14Q9BXL6 1004 aa29.98■■■□□ 2.39
SEC22C-207ENST00000423701 NSD3Q9BZ95 1437 aa29.98■■■□□ 2.39
SEC22C-207ENST00000423701 PHF23Q9BUL5 403 aaPredicted RBP29.97■■■□□ 2.39
SEC22C-207ENST00000423701 USP31Q70CQ4 1352 aa29.96■■■□□ 2.39
SEC22C-207ENST00000423701 ZRANB1Q9UGI0 708 aa29.96■■■□□ 2.39
SEC22C-207ENST00000423701 KIF20BQ96Q89 1820 aa29.94■■■□□ 2.38
SEC22C-207ENST00000423701 PANK3Q9H999 370 aa29.93■■■□□ 2.38
SEC22C-207ENST00000423701 OVOS2A0A0J9YW53 1432 aa29.93■■■□□ 2.38
SEC22C-207ENST00000423701 OVOS2Q6IE36 1432 aa29.93■■■□□ 2.38
SEC22C-207ENST00000423701 GCP02774 474 aa29.92■■■□□ 2.38
SEC22C-207ENST00000423701 NGLY1Q96IV0 654 aa29.92■■■□□ 2.38
SEC22C-207ENST00000423701 AFF2P51816 1311 aa29.91■■■□□ 2.38
SEC22C-207ENST00000423701 PLCH1Q4KWH8 1693 aa29.91■■■□□ 2.38
SEC22C-207ENST00000423701 RGS17Q9UGC6 210 aaPredicted RBP29.9■■■□□ 2.38
SEC22C-207ENST00000423701 KIAA0232Q92628 1395 aa29.9■■■□□ 2.38
SEC22C-207ENST00000423701 COL14A1Q05707 1796 aaKnown RBP29.88■■■□□ 2.37
SEC22C-207ENST00000423701 NFAT5O94916 1531 aa29.88■■■□□ 2.37
SEC22C-207ENST00000423701 FYB1O15117 783 aa29.87■■■□□ 2.37
SEC22C-207ENST00000423701 ZC3H6P61129 1189 aaKnown RBP29.87■■■□□ 2.37
SEC22C-207ENST00000423701 CPDO75976 1380 aa29.87■■■□□ 2.37
SEC22C-207ENST00000423701 SLIT2O94813 1529 aa29.87■■■□□ 2.37
SEC22C-207ENST00000423701 FAM83GA6ND36 823 aa29.87■■■□□ 2.37
SEC22C-207ENST00000423701 FNBP4Q8N3X1 1017 aaPredicted RBP29.87■■■□□ 2.37
SEC22C-207ENST00000423701 PRDM11Q9NQV5 511 aa29.86■■■□□ 2.37
SEC22C-207ENST00000423701 NWD2Q9ULI1 1742 aa29.85■■■□□ 2.37
SEC22C-207ENST00000423701 KCNH5Q8NCM2 988 aa29.85■■■□□ 2.37
SEC22C-207ENST00000423701 GGNBP2Q9H3C7 697 aa29.85■■■□□ 2.37
SEC22C-207ENST00000423701 CGNL1Q0VF96 1302 aa29.84■■■□□ 2.37
SEC22C-207ENST00000423701 SOX12O15370 315 aa29.84■■■□□ 2.37
SEC22C-207ENST00000423701 COG3Q96JB2 828 aa29.84■■■□□ 2.37
SEC22C-207ENST00000423701 BCL9LQ86UU0 1499 aa29.83■■■□□ 2.37
SEC22C-207ENST00000423701 ZNF772Q68DY9 489 aaPredicted RBP29.82■■■□□ 2.36
SEC22C-207ENST00000423701 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.82■■■□□ 2.36
SEC22C-207ENST00000423701 CHRNA2Q15822 529 aa29.81■■■□□ 2.36
SEC22C-207ENST00000423701 USP21Q9UK80 565 aa29.81■■■□□ 2.36
SEC22C-207ENST00000423701 LMO7Q8WWI1 1683 aa29.81■■■□□ 2.36
SEC22C-207ENST00000423701 NRAPQ86VF7 1730 aa29.81■■■□□ 2.36
SEC22C-207ENST00000423701 ANKRD26Q9UPS8 1709 aa29.79■■■□□ 2.36
SEC22C-207ENST00000423701 LTN1O94822 1766 aa29.77■■■□□ 2.36
SEC22C-207ENST00000423701 POTEAQ6S8J7 498 aa29.77■■■□□ 2.36
SEC22C-207ENST00000423701 ARHGEF25Q86VW2 580 aa29.76■■■□□ 2.35
SEC22C-207ENST00000423701 BTG4Q9NY30 223 aa29.76■■■□□ 2.35
SEC22C-207ENST00000423701 KNSTRNQ9Y448 316 aa29.76■■■□□ 2.35
SEC22C-207ENST00000423701 COL18A1P39060 1754 aa29.75■■■□□ 2.35
SEC22C-207ENST00000423701 ZBTB7CA1YPR0 619 aa29.75■■■□□ 2.35
SEC22C-207ENST00000423701 UNC5CLQ8IV45 518 aa29.75■■■□□ 2.35
SEC22C-207ENST00000423701 CAMTA1Q9Y6Y1 1673 aa29.75■■■□□ 2.35
SEC22C-207ENST00000423701 AATKQ6ZMQ8 1374 aa29.75■■■□□ 2.35
SEC22C-207ENST00000423701 ATRNO75882 1429 aa29.74■■■□□ 2.35
SEC22C-207ENST00000423701 NSD2O96028 1365 aa29.74■■■□□ 2.35
SEC22C-207ENST00000423701 PER1O15534 1290 aaPredicted RBP29.74■■■□□ 2.35
SEC22C-207ENST00000423701 ABCC6O95255 1503 aa29.72■■■□□ 2.35
SEC22C-207ENST00000423701 AMER1Q5JTC6 1135 aaPredicted RBP29.71■■■□□ 2.35
SEC22C-207ENST00000423701 QTRT2Q9H974 415 aaKnown RBP29.71■■■□□ 2.35
SEC22C-207ENST00000423701 TRPC5Q9UL62 973 aaPredicted RBP29.71■■■□□ 2.35
SEC22C-207ENST00000423701 FBLN1P23142 703 aa29.7■■■□□ 2.35
SEC22C-207ENST00000423701 COL5A2P05997 1499 aaPredicted RBP29.69■■■□□ 2.34
SEC22C-207ENST00000423701 RGPD5Q99666 1765 aa29.67■■■□□ 2.34
SEC22C-207ENST00000423701 MAP3K19Q56UN5 1328 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms