RNA–Protein interactions for RNA: ENST00000423266.5

TSC22D4-203, Transcript of TSC22 domain family member 4, humanhuman

TSL 2

Gene TSC22D4, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-203ENST00000423266 PAK3O75914 559 aaPredicted RBP23.41■■□□□ 1.34
TSC22D4-203ENST00000423266 VPS72Q15906 364 aa23.41■■□□□ 1.34
TSC22D4-203ENST00000423266 PLCH1Q4KWH8 1693 aa23.38■■□□□ 1.33
TSC22D4-203ENST00000423266 ACEP12821 1306 aa23.37■■□□□ 1.33
TSC22D4-203ENST00000423266 CCDC61Q9Y6R9 512 aa23.37■■□□□ 1.33
TSC22D4-203ENST00000423266 CENPJQ9HC77 1338 aaPredicted RBP23.36■■□□□ 1.33
TSC22D4-203ENST00000423266 PLEKHG3A1L390 1219 aa23.36■■□□□ 1.33
TSC22D4-203ENST00000423266 NBPF8Q3BBV2 869 aa23.36■■□□□ 1.33
TSC22D4-203ENST00000423266 SEPT12Q8IYM1 358 aa23.36■■□□□ 1.33
TSC22D4-203ENST00000423266 BTG4Q9NY30 223 aa23.36■■□□□ 1.33
TSC22D4-203ENST00000423266 POLR3AO14802 1390 aaPredicted RBP23.36■■□□□ 1.33
TSC22D4-203ENST00000423266 ONECUT3O60422 494 aaPredicted RBP23.35■■□□□ 1.33
TSC22D4-203ENST00000423266 NUTM2GQ5VZR2 741 aa23.35■■□□□ 1.33
TSC22D4-203ENST00000423266 CABP2Q9NPB3 220 aa23.35■■□□□ 1.33
TSC22D4-203ENST00000423266 CCDC9Q9Y3X0 531 aaKnown RBP23.35■■□□□ 1.33
TSC22D4-203ENST00000423266 NWD2Q9ULI1 1742 aa23.33■■□□□ 1.33
TSC22D4-203ENST00000423266 CRYBG1Q9Y4K1 1723 aa23.33■■□□□ 1.33
TSC22D4-203ENST00000423266 TOPAZ1Q8N9V7 1692 aa23.33■■□□□ 1.33
TSC22D4-203ENST00000423266 ITSN1Q15811 1721 aa23.33■■□□□ 1.32
TSC22D4-203ENST00000423266 SRPK2P78362 688 aaKnown RBP23.31■■□□□ 1.32
TSC22D4-203ENST00000423266 NRAPQ86VF7 1730 aa23.3■■□□□ 1.32
TSC22D4-203ENST00000423266 CHRNA2Q15822 529 aa23.29■■□□□ 1.32
TSC22D4-203ENST00000423266 EP400Q96L91 3159 aa23.29■■□□□ 1.32
TSC22D4-203ENST00000423266 BRWD3Q6RI45 1802 aa23.29■■□□□ 1.32
TSC22D4-203ENST00000423266 KIAA0232Q92628 1395 aa23.28■■□□□ 1.32
TSC22D4-203ENST00000423266 PPIP5K1Q6PFW1 1433 aa23.28■■□□□ 1.32
TSC22D4-203ENST00000423266 COL14A1Q05707 1796 aaKnown RBP23.28■■□□□ 1.32
TSC22D4-203ENST00000423266 ZC3H6P61129 1189 aaKnown RBP23.28■■□□□ 1.32
TSC22D4-203ENST00000423266 PRDM11Q9NQV5 511 aa23.28■■□□□ 1.32
TSC22D4-203ENST00000423266 TRPM1Q7Z4N2 1603 aa23.27■■□□□ 1.32
TSC22D4-203ENST00000423266 FAM98CQ17RN3 349 aaKnown RBP23.27■■□□□ 1.32
TSC22D4-203ENST00000423266 CABP1Q9NZU7 370 aa23.26■■□□□ 1.31
TSC22D4-203ENST00000423266 QRICH2Q9H0J4 1663 aa23.25■■□□□ 1.31
TSC22D4-203ENST00000423266 CCDC125Q86Z20 511 aa23.25■■□□□ 1.31
TSC22D4-203ENST00000423266 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
TSC22D4-203ENST00000423266 SPATA31A5Q5VU36 1347 aa23.25■■□□□ 1.31
TSC22D4-203ENST00000423266 SPATA31A7Q8IWB4 1347 aa23.25■■□□□ 1.31
TSC22D4-203ENST00000423266 KRT27Q7Z3Y8 459 aa23.24■■□□□ 1.31
TSC22D4-203ENST00000423266 PHRF1Q9P1Y6 1649 aaKnown RBP23.23■■□□□ 1.31
TSC22D4-203ENST00000423266 ROCK2O75116 1388 aaKnown RBP23.23■■□□□ 1.31
TSC22D4-203ENST00000423266 DEFB132Q7Z7B7 95 aa23.21■■□□□ 1.31
TSC22D4-203ENST00000423266 USP19O94966 1318 aa23.21■■□□□ 1.31
TSC22D4-203ENST00000423266 BLMP54132 1417 aaPredicted RBP23.21■■□□□ 1.31
TSC22D4-203ENST00000423266 A0A0G2JS52 829 aa23.2■■□□□ 1.3
TSC22D4-203ENST00000423266 MYT1Q01538 1121 aa23.2■■□□□ 1.3
TSC22D4-203ENST00000423266 FAM182BQ5T319 152 aa23.19■■□□□ 1.3
TSC22D4-203ENST00000423266 STRN4Q9NRL3 753 aa23.19■■□□□ 1.3
TSC22D4-203ENST00000423266 EVC2Q86UK5 1308 aa23.18■■□□□ 1.3
TSC22D4-203ENST00000423266 NRKQ7Z2Y5 1582 aa23.18■■□□□ 1.3
TSC22D4-203ENST00000423266 SPATA31A1Q5TZJ5 1347 aa23.17■■□□□ 1.3
TSC22D4-203ENST00000423266 USP6P35125 1406 aa23.16■■□□□ 1.3
TSC22D4-203ENST00000423266 SSH2Q76I76 1423 aa23.16■■□□□ 1.3
TSC22D4-203ENST00000423266 GCP02774 474 aa23.16■■□□□ 1.3
TSC22D4-203ENST00000423266 NLRP13Q86W25 1043 aa23.16■■□□□ 1.3
TSC22D4-203ENST00000423266 CAMTA1Q9Y6Y1 1673 aa23.16■■□□□ 1.3
TSC22D4-203ENST00000423266 CPDO75976 1380 aa23.14■■□□□ 1.3
TSC22D4-203ENST00000423266 ZNF316A6NFI3 1004 aaPredicted RBP23.14■■□□□ 1.29
TSC22D4-203ENST00000423266 LARP1Q6PKG0 1096 aaKnown RBP23.13■■□□□ 1.29
TSC22D4-203ENST00000423266 THSD7AQ9UPZ6 1657 aa23.13■■□□□ 1.29
TSC22D4-203ENST00000423266 NLRP6P59044 892 aa23.12■■□□□ 1.29
TSC22D4-203ENST00000423266 USP35Q9P2H5 1018 aa23.12■■□□□ 1.29
TSC22D4-203ENST00000423266 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
TSC22D4-203ENST00000423266 BRD4O60885 1362 aaPredicted RBP23.12■■□□□ 1.29
TSC22D4-203ENST00000423266 EVA1CP58658 441 aa23.11■■□□□ 1.29
TSC22D4-203ENST00000423266 LMO7Q8WWI1 1683 aa23.1■■□□□ 1.29
TSC22D4-203ENST00000423266 CARD11Q9BXL7 1154 aa23.1■■□□□ 1.29
TSC22D4-203ENST00000423266 SF3B2Q13435 895 aaKnown RBP23.09■■□□□ 1.29
TSC22D4-203ENST00000423266 TTC21BQ7Z4L5 1316 aa23.08■■□□□ 1.29
TSC22D4-203ENST00000423266 ZBTB7CA1YPR0 619 aa23.07■■□□□ 1.28
TSC22D4-203ENST00000423266 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.28
TSC22D4-203ENST00000423266 SLIT3O75094 1523 aa23.07■■□□□ 1.28
TSC22D4-203ENST00000423266 BARGINQ6ZT62 677 aa23.06■■□□□ 1.28
TSC22D4-203ENST00000423266 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
TSC22D4-203ENST00000423266 PIK3C2AO00443 1686 aa23.06■■□□□ 1.28
TSC22D4-203ENST00000423266 ZNF692Q9BU19 519 aaPredicted RBP23.05■■□□□ 1.28
TSC22D4-203ENST00000423266 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
TSC22D4-203ENST00000423266 COL5A2P05997 1499 aaPredicted RBP23.04■■□□□ 1.28
TSC22D4-203ENST00000423266 TCP11L2Q8N4U5 519 aa23.03■■□□□ 1.28
TSC22D4-203ENST00000423266 AXIN2Q9Y2T1 843 aa23.03■■□□□ 1.28
TSC22D4-203ENST00000423266 HSPA5P11021 654 aaKnown RBP23.02■■□□□ 1.28
TSC22D4-203ENST00000423266 BAG6P46379 1132 aa23.02■■□□□ 1.28
TSC22D4-203ENST00000423266 EN1Q05925 392 aaPredicted RBP23.02■■□□□ 1.28
TSC22D4-203ENST00000423266 AATKQ6ZMQ8 1374 aa23.01■■□□□ 1.27
TSC22D4-203ENST00000423266 AKAP12Q02952 1782 aa23.01■■□□□ 1.27
TSC22D4-203ENST00000423266 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
TSC22D4-203ENST00000423266 CD163L1Q9NR16 1453 aa23■■□□□ 1.27
TSC22D4-203ENST00000423266 SRCAPQ6ZRS2 3230 aa23■■□□□ 1.27
TSC22D4-203ENST00000423266 SOX12O15370 315 aa23■■□□□ 1.27
TSC22D4-203ENST00000423266 TRIM37O94972 964 aa22.99■■□□□ 1.27
TSC22D4-203ENST00000423266 ARHGEF25Q86VW2 580 aa22.99■■□□□ 1.27
TSC22D4-203ENST00000423266 SLC12A5Q9H2X9 1139 aa22.99■■□□□ 1.27
TSC22D4-203ENST00000423266 TTC21AQ8NDW8 1320 aa22.99■■□□□ 1.27
TSC22D4-203ENST00000423266 COL18A1P39060 1754 aa22.99■■□□□ 1.27
TSC22D4-203ENST00000423266 FAM196AQ6ZSG2 479 aa22.97■■□□□ 1.27
TSC22D4-203ENST00000423266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.97■■□□□ 1.27
TSC22D4-203ENST00000423266 THRAP3Q9Y2W1 955 aaKnown RBP22.97■■□□□ 1.27
TSC22D4-203ENST00000423266 PDE3BQ13370 1112 aa22.96■■□□□ 1.27
TSC22D4-203ENST00000423266 TMC1Q8TDI8 760 aa22.96■■□□□ 1.27
TSC22D4-203ENST00000423266 CRB1P82279 1406 aa22.96■■□□□ 1.27
TSC22D4-203ENST00000423266 EZH2Q15910 746 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms