RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 AKAP12Q02952 1782 aa17.31■□□□□ 0.36
RPUSD3-203ENST00000423108 NPHP3Q7Z494 1330 aa17.3■□□□□ 0.36
RPUSD3-203ENST00000423108 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
RPUSD3-203ENST00000423108 KIF1AQ12756 1690 aa17.29■□□□□ 0.36
RPUSD3-203ENST00000423108 SOS2Q07890 1332 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-203ENST00000423108 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-203ENST00000423108 GGNBP2Q9H3C7 697 aa17.29■□□□□ 0.36
RPUSD3-203ENST00000423108 PXDNQ92626 1479 aa17.29■□□□□ 0.36
RPUSD3-203ENST00000423108 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
RPUSD3-203ENST00000423108 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
RPUSD3-203ENST00000423108 MON2Q7Z3U7 1717 aa17.28■□□□□ 0.36
RPUSD3-203ENST00000423108 ROBO1Q9Y6N7 1651 aa17.27■□□□□ 0.36
RPUSD3-203ENST00000423108 NUTM2GQ5VZR2 741 aa17.27■□□□□ 0.36
RPUSD3-203ENST00000423108 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
RPUSD3-203ENST00000423108 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
RPUSD3-203ENST00000423108 TTC21AQ8NDW8 1320 aa17.26■□□□□ 0.35
RPUSD3-203ENST00000423108 SBNO1A3KN83 1393 aa17.26■□□□□ 0.35
RPUSD3-203ENST00000423108 NRKQ7Z2Y5 1582 aa17.25■□□□□ 0.35
RPUSD3-203ENST00000423108 ABTB2Q8N961 1025 aa17.25■□□□□ 0.35
RPUSD3-203ENST00000423108 SPATA31A3Q5VYP0 1347 aa17.24■□□□□ 0.35
RPUSD3-203ENST00000423108 PRKRIP1Q9H875 184 aaPredicted RBP17.24■□□□□ 0.35
RPUSD3-203ENST00000423108 FBLN1P23142 703 aa17.23■□□□□ 0.35
RPUSD3-203ENST00000423108 NLRP6P59044 892 aa17.23■□□□□ 0.35
RPUSD3-203ENST00000423108 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
RPUSD3-203ENST00000423108 MORC1Q86VD1 984 aa17.23■□□□□ 0.35
RPUSD3-203ENST00000423108 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
RPUSD3-203ENST00000423108 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
RPUSD3-203ENST00000423108 NHSL1Q5SYE7 1610 aa17.22■□□□□ 0.35
RPUSD3-203ENST00000423108 MIER1Q8N108 512 aa17.22■□□□□ 0.35
RPUSD3-203ENST00000423108 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-203ENST00000423108 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.35
RPUSD3-203ENST00000423108 ANP32CO43423 234 aa17.21■□□□□ 0.35
RPUSD3-203ENST00000423108 TNS3Q68CZ2 1445 aa17.21■□□□□ 0.34
RPUSD3-203ENST00000423108 NSD2O96028 1365 aa17.2■□□□□ 0.34
RPUSD3-203ENST00000423108 PLEKHG5O94827 1062 aa17.2■□□□□ 0.34
RPUSD3-203ENST00000423108 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-203ENST00000423108 COG3Q96JB2 828 aa17.2■□□□□ 0.34
RPUSD3-203ENST00000423108 RALBP1Q15311 655 aa17.19■□□□□ 0.34
RPUSD3-203ENST00000423108 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
RPUSD3-203ENST00000423108 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
RPUSD3-203ENST00000423108 PIK3C2AO00443 1686 aa17.19■□□□□ 0.34
RPUSD3-203ENST00000423108 HSPA1LP34931 641 aa17.18■□□□□ 0.34
RPUSD3-203ENST00000423108 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
RPUSD3-203ENST00000423108 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
RPUSD3-203ENST00000423108 LRRC59Q96AG4 307 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-203ENST00000423108 PPP2R1AP30153 589 aa17.17■□□□□ 0.34
RPUSD3-203ENST00000423108 USP19O94966 1318 aa17.17■□□□□ 0.34
RPUSD3-203ENST00000423108 ALS2Q96Q42 1657 aa17.16■□□□□ 0.34
RPUSD3-203ENST00000423108 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
RPUSD3-203ENST00000423108 KIF20BQ96Q89 1820 aa17.15■□□□□ 0.34
RPUSD3-203ENST00000423108 SOX12O15370 315 aa17.15■□□□□ 0.34
RPUSD3-203ENST00000423108 CCDC184Q52MB2 194 aa17.15■□□□□ 0.34
RPUSD3-203ENST00000423108 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
RPUSD3-203ENST00000423108 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
RPUSD3-203ENST00000423108 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
RPUSD3-203ENST00000423108 GCP02774 474 aa17.14■□□□□ 0.33
RPUSD3-203ENST00000423108 PNPLA6Q8IY17 1366 aa17.14■□□□□ 0.33
RPUSD3-203ENST00000423108 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
RPUSD3-203ENST00000423108 MED1Q15648 1581 aaPredicted RBP17.13■□□□□ 0.33
RPUSD3-203ENST00000423108 RRS1Q15050 365 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-203ENST00000423108 MYBBP1AQ9BQG0 1328 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-203ENST00000423108 MTHFSP49914 203 aa17.11■□□□□ 0.33
RPUSD3-203ENST00000423108 EMILIN1Q9Y6C2 1016 aa17.11■□□□□ 0.33
RPUSD3-203ENST00000423108 AATKQ6ZMQ8 1374 aa17.11■□□□□ 0.33
RPUSD3-203ENST00000423108 SLIT3O75094 1523 aa17.11■□□□□ 0.33
RPUSD3-203ENST00000423108 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
RPUSD3-203ENST00000423108 ANKRD26Q9UPS8 1709 aa17.1■□□□□ 0.33
RPUSD3-203ENST00000423108 ZC3H6P61129 1189 aaKnown RBP17.09■□□□□ 0.33
RPUSD3-203ENST00000423108 KCNH5Q8NCM2 988 aa17.09■□□□□ 0.33
RPUSD3-203ENST00000423108 MAP3K19Q56UN5 1328 aa17.09■□□□□ 0.33
RPUSD3-203ENST00000423108 NFAT5O94916 1531 aa17.08■□□□□ 0.32
RPUSD3-203ENST00000423108 ARHGEF25Q86VW2 580 aa17.08■□□□□ 0.32
RPUSD3-203ENST00000423108 JCADQ9P266 1359 aa17.06■□□□□ 0.32
RPUSD3-203ENST00000423108 PPM1GO15355 546 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-203ENST00000423108 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
RPUSD3-203ENST00000423108 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
RPUSD3-203ENST00000423108 CRYBG1Q9Y4K1 1723 aa17.04■□□□□ 0.32
RPUSD3-203ENST00000423108 NUTM2BA6NNL0 878 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-203ENST00000423108 NUTM2EB1AL46 878 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-203ENST00000423108 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
RPUSD3-203ENST00000423108 NUTM2AQ8IVF1 878 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-203ENST00000423108 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 KIAA0232Q92628 1395 aa17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 FAM83GA6ND36 823 aa17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 HOXC9P31274 260 aa17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 AMPHP49418 695 aa17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 HAP1P54257 671 aaPredicted RBP17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 HSP90AB2PQ58FF8 381 aa17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 IP6K1Q92551 441 aa17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 AXIN2Q9Y2T1 843 aa17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 SMG6Q86US8 1419 aaKnown RBP17.03■□□□□ 0.32
RPUSD3-203ENST00000423108 MRS2Q9HD23 443 aa17.02■□□□□ 0.32
RPUSD3-203ENST00000423108 MAP2P11137 1827 aaKnown RBP17.02■□□□□ 0.31
RPUSD3-203ENST00000423108 PHRF1Q9P1Y6 1649 aaKnown RBP17.02■□□□□ 0.31
RPUSD3-203ENST00000423108 CPDO75976 1380 aa17.02■□□□□ 0.31
RPUSD3-203ENST00000423108 INSRP06213 1382 aa17.02■□□□□ 0.31
RPUSD3-203ENST00000423108 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
RPUSD3-203ENST00000423108 ADAMTS2O95450 1211 aa17■□□□□ 0.31
RPUSD3-203ENST00000423108 IL13P35225 146 aa16.99■□□□□ 0.31
RPUSD3-203ENST00000423108 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms